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Mouse SNP Summary
Symbol
Name
ID 		Tssr15205
transcription start site region 15205
MGI:5942972

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239385186
MGI SNP Detail		 Chr1:172114962 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 1992 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31569755
MGI SNP Detail		 Chr1:172115074 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 1880 bp downstream
 SNP C/T T T T T C T C T T T T T C T T T T T
rs108392036
MGI SNP Detail		 Chr1:172115102 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 1852 bp downstream
 SNP A/T T A
rs221791198
MGI SNP Detail		 Chr1:172115251 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 1703 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236479273
MGI SNP Detail		 Chr1:172115286 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 1668 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs264575404
MGI SNP Detail		 Chr1:172115346 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 1608 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49797915
MGI SNP Detail		 Chr1:172115370 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 1584 bp downstream
 SNP A/T A T T A T
rs31569754
MGI SNP Detail		 Chr1:172115371 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 1583 bp downstream
 SNP C/G C C C G C G C C C C C G G C C C C
rs45769315
MGI SNP Detail		 Chr1:172115407 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 1547 bp downstream
 SNP A/C A C C A C
rs51211210
MGI SNP Detail		 Chr1:172115411 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 1543 bp downstream
 SNP A/C A C C A C
rs246600542
MGI SNP Detail		 Chr1:172115468 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 1486 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217508087
MGI SNP Detail		 Chr1:172115538 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 1416 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs31568852
MGI SNP Detail		 Chr1:172115539 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 1415 bp downstream
 SNP C/T T T T C T C T T T T T C C T T T T T
rs244454915
MGI SNP Detail		 Chr1:172115559 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 1395 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212582678
MGI SNP Detail		 Chr1:172115563 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 1391 bp downstream
 SNP C/T C C C C T C C T C C C T T T T T T C C C C T C C C T T C C C C T T C C C C C C C C C C C C C T C C C C
rs237339175
MGI SNP Detail		 Chr1:172115564 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 1390 bp downstream
 SNP A/G G G G G A G G A G G G A A A A A A G G G G A G G G A A G G G G A A G G G G G G G G G G G G G A G G G G
rs262200940
MGI SNP Detail		 Chr1:172115565 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 1389 bp downstream
 SNP C/G C C C C G C C G C C C G G G G G G C C C C G C C C G G C C C C G G C C C C C C C C C C C C C C C C C C
rs217404869
MGI SNP Detail		 Chr1:172115583 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 1371 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C T
rs31568851
MGI SNP Detail		 Chr1:172115584 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 1370 bp downstream
 SNP C/G C C G G G C C G G
rs49697487
MGI SNP Detail		 Chr1:172115628 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 1326 bp downstream
 SNP G/T G T T G T
rs221751711
MGI SNP Detail		 Chr1:172115652 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 1302 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs236413342
MGI SNP Detail		 Chr1:172115685 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 1269 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs108429320
MGI SNP Detail		 Chr1:172115766 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 1188 bp downstream
 SNP A/T T A
rs108189042
MGI SNP Detail		 Chr1:172115772 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 1182 bp downstream
 SNP A/T T A
rs46480510
MGI SNP Detail		 Chr1:172115784 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 1170 bp downstream
 SNP C/T T C T T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs51302485
MGI SNP Detail		 Chr1:172115823 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 1131 bp downstream
 SNP A/G A A A G A A G A A G G G G G G A A A A A A A G G A A G G A A A A A A A A A A A A A G A A A
rs108902693
MGI SNP Detail		 Chr1:172115825 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 1129 bp downstream
 SNP G G
rs582012964
MGI SNP Detail		 Chr1:172115838 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 1116 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs52212390
MGI SNP Detail		 Chr1:172115846 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 1108 bp downstream
 SNP C/G G C C G C
rs243025896
MGI SNP Detail		 Chr1:172115861 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 1093 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs52409331
MGI SNP Detail		 Chr1:172115926 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 1028 bp downstream
 SNP A/T A T A A A
rs52247631
MGI SNP Detail		 Chr1:172115939 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 1015 bp downstream
 SNP C/T T C T T T
rs52277905
MGI SNP Detail		 Chr1:172115957 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 997 bp downstream
 SNP C/T C T C C C
rs261298045
MGI SNP Detail		 Chr1:172115971 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 983 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs228609847
MGI SNP Detail		 Chr1:172115973 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 981 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244444000
MGI SNP Detail		 Chr1:172115976 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 978 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31568849
MGI SNP Detail		 Chr1:172116005 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 949 bp downstream
 SNP C/T C C C C T C T T C C C C T C C C C C
rs31568848
MGI SNP Detail		 Chr1:172116066 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 888 bp downstream
 SNP A/G A A A A G A G G A A A A G A A A A A
rs387781766
MGI SNP Detail		 Chr1:172116127 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 827 bp downstream
 SNP G/T T T T T T G T T G T T G G G G G G T G T T G T T T G G T T T T G G T T T T T T T T T T T T T T G T T T T
rs49690056
MGI SNP Detail		 Chr1:172116141 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 813 bp downstream
 SNP C/G G C G G C
rs47408819
MGI SNP Detail		 Chr1:172116155 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 799 bp downstream
 SNP C/T C T C C T
rs31568846
MGI SNP Detail		 Chr1:172116176 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 778 bp downstream
 SNP C/T T T T C C C T T T T C T T T
rs31568845
MGI SNP Detail		 Chr1:172116190 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 764 bp downstream
 SNP C/T C C C C C C T C C C C C C C C
rs31568844
MGI SNP Detail		 Chr1:172116237 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 717 bp downstream
 SNP C/T C C C C T C T T C C C C T C C C C C
rs260685041
MGI SNP Detail		 Chr1:172116258 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 696 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31567973
MGI SNP Detail		 Chr1:172116282 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 672 bp downstream
 SNP A/G A A A G G A A A A G A A A A
rs245718773
MGI SNP Detail		 Chr1:172116393 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 561 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259270272
MGI SNP Detail		 Chr1:172116399 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 555 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs31567971
MGI SNP Detail		 Chr1:172116414 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 540 bp downstream
 SNP A/G G G G G G G A G G G G G G G G
rs242725963
MGI SNP Detail		 Chr1:172116415 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 539 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31567970
MGI SNP Detail		 Chr1:172116457 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 497 bp downstream
 SNP C/T T T T T T T C T T T T T T T T
rs228574561
MGI SNP Detail		 Chr1:172116474 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 480 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs31567969
MGI SNP Detail		 Chr1:172116484 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 470 bp downstream
 SNP A/G G G G G A G A G G G G A G G G G G
rs264674924
MGI SNP Detail		 Chr1:172116487 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 467 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs31567968
MGI SNP Detail		 Chr1:172116564 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 390 bp downstream
 SNP A/G A A A A G A G A A A A A G A A A A A
rs31567966
MGI SNP Detail		 Chr1:172116610 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 344 bp downstream
 SNP A/G G G G G G G A G G G G G G G G
rs258355737
MGI SNP Detail		 Chr1:172116630 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 324 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A
rs31567965
MGI SNP Detail		 Chr1:172116680 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 274 bp downstream
 SNP A/G G G G G G G A G G G G G G G G
rs247789945
MGI SNP Detail		 Chr1:172116686 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 268 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs49949251
MGI SNP Detail		 Chr1:172116688 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 266 bp downstream
 SNP A/T T A T
rs247550658
MGI SNP Detail		 Chr1:172116703 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 251 bp downstream
 SNP A/C A C
rs215428255
MGI SNP Detail		 Chr1:172116704 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 250 bp downstream
 SNP C/G C G
rs31567053
MGI SNP Detail		 Chr1:172116745 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 209 bp downstream
 SNP C/T T T T T C T C T T T T T C T T T T T
rs31567052
MGI SNP Detail		 Chr1:172116796 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 158 bp downstream
 SNP C/T T T C T C T C C T C T T C T T T T T
rs47095432
MGI SNP Detail		 Chr1:172116827 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 127 bp downstream
 SNP A/G G A G G G
rs31567050
MGI SNP Detail		 Chr1:172116856 Atp1a2 within coordinates of
Gm39704 within coordinates of
Gm57554 within coordinates of
Tssr15205 98 bp downstream
 SNP A/C C C C C C C A C C C C C C C C
rs235922675
MGI SNP Detail		 Chr1:172116862 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 92 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs31567049
MGI SNP Detail		 Chr1:172116905 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 49 bp downstream
 SNP C/G C C C C C C C C G C C C C C C
rs263240624
MGI SNP Detail		 Chr1:172116938 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 16 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220906584
MGI SNP Detail		 Chr1:172117005 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 40 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236286390
MGI SNP Detail		 Chr1:172117150 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 185 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48418723
MGI SNP Detail		 Chr1:172117151 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 186 bp upstream
 SNP A/G G A G G G
rs49306769
MGI SNP Detail		 Chr1:172117162 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 197 bp upstream
 SNP C/T C T C C C
rs244006780
MGI SNP Detail		 Chr1:172117191 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 226 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs261528184
MGI SNP Detail		 Chr1:172117256 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 291 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31567047
MGI SNP Detail		 Chr1:172117295 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 330 bp upstream
 SNP A/G G G G A G A G G G G G A G G G G
rs52060216
MGI SNP Detail		 Chr1:172117399 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 434 bp upstream
 SNP C/G C G C C C
rs387343207
MGI SNP Detail		 Chr1:172117525 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 560 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T G T T T G T T G T T T T T T G T T G G T T T T G G T T T G G T G
rs31567046
MGI SNP Detail		 Chr1:172117604 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 639 bp upstream
 SNP C/T T T T T C C C T C C T C C T T
rs31567044
MGI SNP Detail		 Chr1:172117669 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 704 bp upstream
 SNP A/G A A A A G A G A A A A A G A A A A
rs46422882
MGI SNP Detail		 Chr1:172117674 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 709 bp upstream
 SNP G/T T G T T T
rs31566073
MGI SNP Detail		 Chr1:172117706 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 741 bp upstream
 SNP A/G A A A A G A G G A G G A G A G A A A
rs31566072
MGI SNP Detail		 Chr1:172117728 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 763 bp upstream
 SNP A/G G G G G G G G G A A G G A G G
rs52052284
MGI SNP Detail		 Chr1:172117804 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 839 bp upstream
 SNP G/T T T G T T T
rs49006494
MGI SNP Detail		 Chr1:172117806 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 841 bp upstream
 SNP C/G G G C G G G
rs214376675
MGI SNP Detail		 Chr1:172117829 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 864 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31566071
MGI SNP Detail		 Chr1:172117874 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 909 bp upstream
 SNP C/T C C C C C C T C C C C C C C C
rs31566070
MGI SNP Detail		 Chr1:172117934 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 969 bp upstream
 SNP C/T T T T T T C T C C T C C T C T C T T T
rs214996835
MGI SNP Detail		 Chr1:172117969 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 1004 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236169354
MGI SNP Detail		 Chr1:172117979 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 1014 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254214884
MGI SNP Detail		 Chr1:172118032 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 1067 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs218753920
MGI SNP Detail		 Chr1:172118034 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 1069 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31566069
MGI SNP Detail		 Chr1:172118035 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 1070 bp upstream
 SNP A/G G G G G G G A G G G G G G G G
rs262460410
MGI SNP Detail		 Chr1:172118036 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 1071 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31566068
MGI SNP Detail		 Chr1:172118037 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 1072 bp upstream
 SNP A/G A A A A A A A A G G A A G A A
rs31566067
MGI SNP Detail		 Chr1:172118083 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 1118 bp upstream
 SNP A/G A A A A A G A G A A G A A A A
rs258276206
MGI SNP Detail		 Chr1:172118085 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 1120 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C G C C C G C C G C C C C C C G C C G G C C C C G G C C C G G C G
rs220882574
MGI SNP Detail		 Chr1:172118120 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 1155 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241750383
MGI SNP Detail		 Chr1:172118122 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 1157 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs31566066
MGI SNP Detail		 Chr1:172118126 Atp1a2 within coordinates of
Gm57554 within coordinates of
Tssr15205 1161 bp upstream
 SNP A/G G G G G G A G A G G G G G A G G G G G
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Showing SNP(s) 1 - 100 of 120
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory