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Mouse SNP Summary
Symbol
Name
ID 		Tssr15745
transcription start site region 15745
MGI:5943512

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235587441
MGI SNP Detail		 Chr1:190709483 Tssr15745 1909 bp downstream
Vash2 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs253705727
MGI SNP Detail		 Chr1:190709520 Tssr15745 1872 bp downstream
Vash2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221104507
MGI SNP Detail		 Chr1:190709532 Tssr15745 1860 bp downstream
Vash2 within coordinates of
 SNP A/C/G C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C A C C C C C C C C C C C C G C C C C
rs247033852
MGI SNP Detail		 Chr1:190709581 Tssr15745 1811 bp downstream
Vash2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262463142
MGI SNP Detail		 Chr1:190709605 Tssr15745 1787 bp downstream
Vash2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A G A G A A A A A A A A A A A A G A A A A
rs220913000
MGI SNP Detail		 Chr1:190709628 Tssr15745 1764 bp downstream
Vash2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241062887
MGI SNP Detail		 Chr1:190709668 Tssr15745 1724 bp downstream
Vash2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259823861
MGI SNP Detail		 Chr1:190709684 Tssr15745 1708 bp downstream
Vash2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A G A A A A A A A A A A A A G A A A A
rs228419026
MGI SNP Detail		 Chr1:190709786 Tssr15745 1606 bp downstream
Vash2 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs245974384
MGI SNP Detail		 Chr1:190709793 Tssr15745 1599 bp downstream
Vash2 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs582979348
MGI SNP Detail		 Chr1:190709847 Tssr15745 1545 bp downstream
Vash2 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs584866004
MGI SNP Detail		 Chr1:190709870 Tssr15745 1522 bp downstream
Vash2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G A G G G G G G G G G G G G A G G G G
rs256821339
MGI SNP Detail		 Chr1:190710078 Tssr15745 1314 bp downstream
Vash2 within coordinates of
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T G T G T T T T T T T T T T T T G T T T T
rs579072179
MGI SNP Detail		 Chr1:190710101 Tssr15745 1291 bp downstream
Vash2 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs230644034
MGI SNP Detail		 Chr1:190710275 Cpgi1214 within coordinates of
Tssr15745 1117 bp downstream
Vash2 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs221043065
MGI SNP Detail		 Chr1:190710748 Cpgi1214 within coordinates of
Tssr15745 644 bp downstream
Vash2 within coordinates of
 SNP C/T T C
rs212651295
MGI SNP Detail		 Chr1:190710820 Cpgi1214 within coordinates of
Tssr15745 572 bp downstream
Vash2 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229568993
MGI SNP Detail		 Chr1:190710866 Cpgi1214 within coordinates of
Tssr15745 526 bp downstream
Vash2 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T C T T T T T T T T T T T T C T T T T
rs249399631
MGI SNP Detail		 Chr1:190711019 Cpgi1214 within coordinates of
Tssr15745 373 bp downstream
Vash2 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs217759329
MGI SNP Detail		 Chr1:190711046 Cpgi1214 within coordinates of
Tssr15745 346 bp downstream
Vash2 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs235914877
MGI SNP Detail		 Chr1:190711089 Cpgi1214 within coordinates of
Tssr15745 303 bp downstream
Vash2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs253966767
MGI SNP Detail		 Chr1:190711096 Cpgi1214 within coordinates of
Tssr15745 296 bp downstream
Vash2 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs215207999
MGI SNP Detail		 Chr1:190711101 Cpgi1214 within coordinates of
Tssr15745 291 bp downstream
Vash2 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C G C C C C C C C C C C C C G C C C C
rs237119996
MGI SNP Detail		 Chr1:190711129 Cpgi1214 within coordinates of
Tssr15745 263 bp downstream
Vash2 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T C T T T T T T T T T T T T C T T T T
rs262107266
MGI SNP Detail		 Chr1:190711141 Cpgi1214 within coordinates of
Tssr15745 251 bp downstream
Vash2 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A C A C A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs221873757
MGI SNP Detail		 Chr1:190711209 Cpgi1214 within coordinates of
Rr426017 within coordinates of
Tssr15745 183 bp downstream
Vash2 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A A C A A A A A A A A A A A A C A A A A
rs243821567
MGI SNP Detail		 Chr1:190711282 Cpgi1214 within coordinates of
Rr426017 within coordinates of
Tssr15745 110 bp downstream
Vash2 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs253059645
MGI SNP Detail		 Chr1:190711442 Cpgi1214 within coordinates of
Rr426017 within coordinates of
Tssr15745 13 bp upstream
Vash2 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs221881869
MGI SNP Detail		 Chr1:190711481 Cpgi1214 within coordinates of
Rr426017 within coordinates of
Tssr15745 52 bp upstream
Tssr15747 within coordinates of
Vash2 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs239957969
MGI SNP Detail		 Chr1:190711702 Cpgi1214 within coordinates of
Rr426017 within coordinates of
Tssr15745 273 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C G C G C C C C C C C C C C C C G C C C C
rs257199922
MGI SNP Detail		 Chr1:190711703 Cpgi1214 within coordinates of
Rr426017 within coordinates of
Tssr15745 274 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230779331
MGI SNP Detail		 Chr1:190711743 Cpgi1214 within coordinates of
Rr426017 within coordinates of
Tssr15745 314 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs242792426
MGI SNP Detail		 Chr1:190711785 Cpgi1214 within coordinates of
Rr426017 within coordinates of
Tssr15745 356 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264799372
MGI SNP Detail		 Chr1:190711861 Rr426017 within coordinates of
Tssr15745 432 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T G T T T T T T T T T T T T G T T T T
rs227439534
MGI SNP Detail		 Chr1:190711918 Rr426017 within coordinates of
Tssr15745 489 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs248596098
MGI SNP Detail		 Chr1:190711952 Rr426017 within coordinates of
Tssr15745 523 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217661994
MGI SNP Detail		 Chr1:190712023 Tssr15745 594 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs582098336
MGI SNP Detail		 Chr1:190712049 Tssr15745 620 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs580463731
MGI SNP Detail		 Chr1:190712192 Tssr15745 763 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs580135414
MGI SNP Detail		 Chr1:190712244 Tssr15745 815 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs583291142
MGI SNP Detail		 Chr1:190712271 Tssr15745 842 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs228772086
MGI SNP Detail		 Chr1:190712363 Tssr15745 934 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs247609413
MGI SNP Detail		 Chr1:190712386 Tssr15745 957 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs215562032
MGI SNP Detail		 Chr1:190712412 Tssr15745 983 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs239052953
MGI SNP Detail		 Chr1:190712414 Tssr15745 985 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs257179483
MGI SNP Detail		 Chr1:190712428 Tssr15745 999 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213372576
MGI SNP Detail		 Chr1:190712462 Tssr15745 1033 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs234817163
MGI SNP Detail		 Chr1:190712463 Tssr15745 1034 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs253352418
MGI SNP Detail		 Chr1:190712512 Tssr15745 1083 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs221848843
MGI SNP Detail		 Chr1:190712529 Tssr15745 1100 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239950517
MGI SNP Detail		 Chr1:190712542 Tssr15745 1113 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs251195366
MGI SNP Detail		 Chr1:190712555 Tssr15745 1126 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A G A A A A A A A A A A A A G A G A
rs586549615
MGI SNP Detail		 Chr1:190712627 Tssr15745 1198 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T A T T T T A T A T T T T T T T T T T T T T T
rs223428385
MGI SNP Detail		 Chr1:190712741 Tssr15745 1312 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs245562961
MGI SNP Detail		 Chr1:190712759 Tssr15745 1330 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs261769189
MGI SNP Detail		 Chr1:190712772 Tssr15745 1343 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C T C C C C C C C C C C C C T C C C C
rs227754649
MGI SNP Detail		 Chr1:190712789 Tssr15745 1360 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242516556
MGI SNP Detail		 Chr1:190712793 Tssr15745 1364 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C T C C C C C C C C C C C C T C C C C
rs260482054
MGI SNP Detail		 Chr1:190712809 Tssr15745 1380 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs228750491
MGI SNP Detail		 Chr1:190712837 Tssr15745 1408 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs247546989
MGI SNP Detail		 Chr1:190712867 Tssr15745 1438 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A C A A A A A A A A A A A A C A A A A
rs265596993
MGI SNP Detail		 Chr1:190712875 Tssr15745 1446 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs231234006
MGI SNP Detail		 Chr1:190713041 Tssr15745 1612 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs255752855
MGI SNP Detail		 Chr1:190713104 Tssr15745 1675 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212861873
MGI SNP Detail		 Chr1:190713220 Tssr15745 1791 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A G A A A A A A A A A A A A G A A A A
rs36809657
MGI SNP Detail		 Chr1:190713237 Tssr15745 1808 bp upstream
 SNP G/T T T T T T T G T T T T T T T
rs241150944
MGI SNP Detail		 Chr1:190713292 Tssr15745 1863 bp upstream
 SNP A/T T A
rs265208435
MGI SNP Detail		 Chr1:190713296 Tssr15745 1867 bp upstream
 SNP C/G G C
rs233452416
MGI SNP Detail		 Chr1:190713313 Tssr15745 1884 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C T C C C C C C C C C C C C C C C C C T C T C C C T C
rs251144560
MGI SNP Detail		 Chr1:190713314 Tssr15745 1885 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A C C A C A A A C A C A A A A A A A A A C A C C A A C A
rs223018076
MGI SNP Detail		 Chr1:190713315 Tssr15745 1886 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T A A T T T T A T A T T T T T T T T T A T A A T T A T
rs236159595
MGI SNP Detail		 Chr1:190713323 Tssr15745 1894 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G A G G G G G G G G G G G G A G G G G
rs219274219
MGI SNP Detail		 Chr1:190713344 Tssr15745 1915 bp upstream
 SNP C/T C T
rs241097467
MGI SNP Detail		 Chr1:190713349 Tssr15745 1920 bp upstream
 SNP A/G G A
rs242498385
MGI SNP Detail		 Chr1:190713417 Tssr15745 1988 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
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Showing SNP(s) 1 - 75 of 75
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory