About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Tssr16031
transcription start site region 16031
MGI:5943798

<< first < prev1 next > last >>
Showing SNP(s) 1 - 54 of 54

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs582362569
MGI SNP Detail
Chr2:6723984 Celf2 within coordinates of
Tssr16031 1994 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs584637762
MGI SNP Detail
Chr2:6723986 Celf2 within coordinates of
Tssr16031 1992 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs579213654
MGI SNP Detail
Chr2:6723988 Celf2 within coordinates of
Tssr16031 1990 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27063967
MGI SNP Detail
Chr2:6724007 Celf2 within coordinates of
Tssr16031 1971 bp upstream
SNP C/T T T T T T T T T T T T T T T C C
rs586558692
MGI SNP Detail
Chr2:6724026 Celf2 within coordinates of
Tssr16031 1952 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs214564153
MGI SNP Detail
Chr2:6724079 Celf2 within coordinates of
Tssr16031 1899 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236758385
MGI SNP Detail
Chr2:6724124 Celf2 within coordinates of
Tssr16031 1854 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260742548
MGI SNP Detail
Chr2:6724164 Celf2 within coordinates of
Tssr16031 1814 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs218533563
MGI SNP Detail
Chr2:6724173 Celf2 within coordinates of
Tssr16031 1805 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235270694
MGI SNP Detail
Chr2:6724203 Celf2 within coordinates of
Tssr16031 1775 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs579560312
MGI SNP Detail
Chr2:6724259 Celf2 within coordinates of
Tssr16031 1719 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs582095765
MGI SNP Detail
Chr2:6724282 Celf2 within coordinates of
Tssr16031 1696 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs255210369
MGI SNP Detail
Chr2:6724305 Celf2 within coordinates of
Tssr16031 1673 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs221014621
MGI SNP Detail
Chr2:6724315 Celf2 within coordinates of
Tssr16031 1663 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs248957859
MGI SNP Detail
Chr2:6724385 Celf2 within coordinates of
Tssr16031 1593 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A A C C C C C C C C C C C C C C C C C
rs262297236
MGI SNP Detail
Chr2:6724414 Celf2 within coordinates of
Tssr16031 1564 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs27063966
MGI SNP Detail
Chr2:6724537 Celf2 within coordinates of
Tssr16031 1441 bp upstream
SNP C/T T T T T T C T T T T T T T
rs244275751
MGI SNP Detail
Chr2:6724594 Celf2 within coordinates of
Tssr16031 1384 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G C G G G G G G G G G G G C G G G G G G G C G G G G
rs27063965
MGI SNP Detail
Chr2:6724670 Celf2 within coordinates of
Tssr16031 1308 bp upstream
SNP C/T T T T T T C T T T T T T T T
rs224432564
MGI SNP Detail
Chr2:6724676 Celf2 within coordinates of
Tssr16031 1302 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs246786566
MGI SNP Detail
Chr2:6724792 Celf2 within coordinates of
Tssr16031 1186 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs259975135
MGI SNP Detail
Chr2:6724794 Celf2 within coordinates of
Tssr16031 1184 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs231980305
MGI SNP Detail
Chr2:6724828 Celf2 within coordinates of
Tssr16031 1150 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T
rs258781515
MGI SNP Detail
Chr2:6724877 Celf2 within coordinates of
Tssr16031 1101 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs214138321
MGI SNP Detail
Chr2:6724899 Celf2 within coordinates of
Tssr16031 1079 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239310191
MGI SNP Detail
Chr2:6725070 Celf2 within coordinates of
Rr56941 within coordinates of
Tssr16031 908 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27063964
MGI SNP Detail
Chr2:6725334 Celf2 within coordinates of
Rr56941 within coordinates of
Tssr16031 644 bp upstream
SNP G/T G G G G G G G T G G G G G
rs212661177
MGI SNP Detail
Chr2:6725545 Celf2 within coordinates of
Rr56941 within coordinates of
Tssr16031 433 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs27063963
MGI SNP Detail
Chr2:6725586 Celf2 within coordinates of
Rr56941 within coordinates of
Tssr16031 392 bp upstream
SNP A/G G G G G G G G G G G G G A G
rs27063962
MGI SNP Detail
Chr2:6725656 Celf2 within coordinates of
Rr56941 within coordinates of
Tssr16031 322 bp upstream
SNP A/G G G G G G G G G G G G G A G
rs27063961
MGI SNP Detail
Chr2:6725746 Celf2 within coordinates of
Rr56941 within coordinates of
Tssr16031 232 bp upstream
SNP C/T T T T T T T T T T T C T
rs262006180
MGI SNP Detail
Chr2:6725891 Celf2 within coordinates of
Rr56941 within coordinates of
Tssr16031 87 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A A A A A A A A T A A A A A A A T A A A A
rs27063960
MGI SNP Detail
Chr2:6725948 Celf2 within coordinates of
Rr56941 within coordinates of
Tssr16031 30 bp upstream
SNP A/G A A A A A A A A A A A A G A
rs243873514
MGI SNP Detail
Chr2:6725958 Celf2 within coordinates of
Rr56941 within coordinates of
Tssr16031 20 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs254032444
MGI SNP Detail
Chr2:6726050 Celf2 within coordinates of
Rr56941 within coordinates of
Tssr16031 58 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs218798944
MGI SNP Detail
Chr2:6726125 Celf2 within coordinates of
Rr56941 within coordinates of
Tssr16031 133 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs241029748
MGI SNP Detail
Chr2:6726197 Celf2 within coordinates of
Rr56941 within coordinates of
Tssr16031 205 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs259936202
MGI SNP Detail
Chr2:6726721 Celf2 within coordinates of
Rr56941 within coordinates of
Tssr16031 729 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243002170
MGI SNP Detail
Chr2:6726831 Celf2 within coordinates of
Rr56941 within coordinates of
Tssr16031 839 bp downstream
Tssr22462 within coordinates of
SNP A/T T A
rs253480155
MGI SNP Detail
Chr2:6726971 Celf2 within coordinates of
Rr56941 within coordinates of
Tssr16031 979 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265173332
MGI SNP Detail
Chr2:6726985 Celf2 within coordinates of
Rr56941 within coordinates of
Tssr16031 993 bp downstream
Tssr22463 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231135786
MGI SNP Detail
Chr2:6727304 Celf2 within coordinates of
Rr56941 within coordinates of
Tssr16031 1312 bp downstream
SNP C/T T T T T T T T T C T T T T T T T T T T T T T T T T C T T T T T T T T C C T T T T T T T T T T T T T T T T T
rs27063959
MGI SNP Detail
Chr2:6727388 Celf2 within coordinates of
Rr56941 within coordinates of
Tssr16031 1396 bp downstream
SNP C/T C C C C C T T C C C C T T T
rs213184362
MGI SNP Detail
Chr2:6727438 Celf2 within coordinates of
Rr56941 within coordinates of
Tssr16031 1446 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs235332194
MGI SNP Detail
Chr2:6727455 Celf2 within coordinates of
Rr56941 within coordinates of
Tssr16031 1463 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248608965
MGI SNP Detail
Chr2:6727477 Celf2 within coordinates of
Rr56941 within coordinates of
Tssr16031 1485 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs215294674
MGI SNP Detail
Chr2:6727662 Celf2 within coordinates of
Tssr16031 1670 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs240595836
MGI SNP Detail
Chr2:6727705 Celf2 within coordinates of
Tssr16031 1713 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257027284
MGI SNP Detail
Chr2:6727721 Celf2 within coordinates of
Tssr16031 1729 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs215145138
MGI SNP Detail
Chr2:6727896 Celf2 within coordinates of
Tssr16031 1904 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234678934
MGI SNP Detail
Chr2:6727950 Celf2 within coordinates of
Tssr16031 1958 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs248777761
MGI SNP Detail
Chr2:6727957 Celf2 within coordinates of
Tssr16031 1965 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs221900201
MGI SNP Detail
Chr2:6727958 Celf2 within coordinates of
Tssr16031 1966 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs240997404
MGI SNP Detail
Chr2:6727992 Celf2 within coordinates of
Tssr16031 2000 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
<< first < prev1 next > last >>
Showing SNP(s) 1 - 54 of 54

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
12/17/2024
MGI 6.24
The Jackson Laboratory