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Mouse SNP Summary
Symbol
Name
ID
Tssr16686
transcription start site region 16686
MGI:5944453

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Showing SNP(s) 1 - 52 of 52

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236754848
MGI SNP Detail
Chr2:25151397 Tssr16686 1987 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs265096568
MGI SNP Detail
Chr2:25151439 Tssr16686 1945 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs230829606
MGI SNP Detail
Chr2:25151512 Tssr16686 1872 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247779977
MGI SNP Detail
Chr2:25151539 Tssr16686 1845 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs263580176
MGI SNP Detail
Chr2:25151563 Tssr16686 1821 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs228472284
MGI SNP Detail
Chr2:25151686 Tssr16686 1698 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs248705717
MGI SNP Detail
Chr2:25151702 Tssr16686 1682 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A G A A A A A A A A A G A A A A A A A G A A A A
rs211822530
MGI SNP Detail
Chr2:25151777 Tssr16686 1607 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224775382
MGI SNP Detail
Chr2:25151797 Tssr16686 1587 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250344888
MGI SNP Detail
Chr2:25151805 Rr56414 within coordinates of
Tssr16686 1579 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs587213017
MGI SNP Detail
Chr2:25151836 Rr56414 within coordinates of
Tssr16686 1548 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T C T T T T T T T T T T T T
rs581336877
MGI SNP Detail
Chr2:25151855 Rr56414 within coordinates of
Tssr16686 1529 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214760924
MGI SNP Detail
Chr2:25151933 Rr56414 within coordinates of
Tssr16686 1451 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237356334
MGI SNP Detail
Chr2:25151934 Rr56414 within coordinates of
Tssr16686 1450 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A A A A A A A C A A A A A A C A A A A
rs257720696
MGI SNP Detail
Chr2:25152030 Rr56414 within coordinates of
Tssr16686 1354 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs216317542
MGI SNP Detail
Chr2:25152064 Rr56414 within coordinates of
Tssr16686 1320 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs234621388
MGI SNP Detail
Chr2:25152242 Rr56414 within coordinates of
Tssr16686 1142 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A G A A A A A A G A A A A
rs253467985
MGI SNP Detail
Chr2:25152301 Cpgi11304 within coordinates of
Rr396819 within coordinates of
Rr56414 within coordinates of
Tssr16686 1083 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C T T T T T T C T T T T T T C T T T T
rs218083884
MGI SNP Detail
Chr2:25152653 Cpgi11304 within coordinates of
Rr56414 within coordinates of
Tprn within coordinates of
Tssr16681 within coordinates of
Tssr16686 731 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C G C C G C C C C G C C C C C G C C C C C C G C C C C C C G C C C C
rs237423428
MGI SNP Detail
Chr2:25152677 Cpgi11304 within coordinates of
Rr56414 within coordinates of
Tprn within coordinates of
Tssr16681 within coordinates of
Tssr16686 707 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257112326
MGI SNP Detail
Chr2:25152924 Cpgi11304 within coordinates of
Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 460 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223212936
MGI SNP Detail
Chr2:25153044 Cpgi11304 within coordinates of
Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 340 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T A T T T T T T A T T T T T T T T T T T T
rs245413842
MGI SNP Detail
Chr2:25153062 Cpgi11304 within coordinates of
Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 322 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs265701268
MGI SNP Detail
Chr2:25153098 Cpgi11304 within coordinates of
Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 286 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs222681811
MGI SNP Detail
Chr2:25153302 Cpgi11304 within coordinates of
Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 82 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs242613624
MGI SNP Detail
Chr2:25153492 Cpgi11304 within coordinates of
Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 99 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs255932432
MGI SNP Detail
Chr2:25153494 Cpgi11304 within coordinates of
Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 101 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224718592
MGI SNP Detail
Chr2:25153621 Cpgi11304 within coordinates of
Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 228 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254973682
MGI SNP Detail
Chr2:25153662 Cpgi11304 within coordinates of
Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 269 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs262687318
MGI SNP Detail
Chr2:25153692 Cpgi11304 within coordinates of
Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 299 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231737621
MGI SNP Detail
Chr2:25153815 Cpgi11304 within coordinates of
Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 422 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G G
rs252839266
MGI SNP Detail
Chr2:25153994 Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 601 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs216262006
MGI SNP Detail
Chr2:25154163 Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 770 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs583908817
MGI SNP Detail
Chr2:25154274 Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 881 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T C C C C C C T C C C C C C C C C C C
rs587420729
MGI SNP Detail
Chr2:25154279 Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 886 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C A C C C C C C A C C C C C C C C C C C
rs581608291
MGI SNP Detail
Chr2:25154280 Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 887 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T C C C C C C T C C C C C C C C C C C
rs234764981
MGI SNP Detail
Chr2:25154290 Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 897 bp downstream
Tssr16688 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C G C C C C C C G C C C C C C C C C C C
rs247685582
MGI SNP Detail
Chr2:25154294 Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 901 bp downstream
Tssr16688 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C A C C C C C C A C C C C C C C C C C C
rs212367358
MGI SNP Detail
Chr2:25154556 Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 1163 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs235712067
MGI SNP Detail
Chr2:25154609 Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 1216 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs262108491
MGI SNP Detail
Chr2:25154638 Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 1245 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs46913787
MGI SNP Detail
Chr2:25154639 Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 1246 bp downstream
SNP G G
rs240047301
MGI SNP Detail
Chr2:25154720 Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 1327 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs33064055
MGI SNP Detail
Chr2:25154767 Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 1374 bp downstream
SNP A/C C A
rs222613823
MGI SNP Detail
Chr2:25154824 Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 1431 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs242736975
MGI SNP Detail
Chr2:25154832 Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 1439 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255874815
MGI SNP Detail
Chr2:25155034 Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 1641 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33586166
MGI SNP Detail
Chr2:25155074 Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 1681 bp downstream
SNP C/T C T C
rs243045004
MGI SNP Detail
Chr2:25155141 Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 1748 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265219186
MGI SNP Detail
Chr2:25155284 Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 1891 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33112043
MGI SNP Detail
Chr2:25155325 Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 1932 bp downstream
SNP A/G G A G
rs257817278
MGI SNP Detail
Chr2:25155353 Rr56414 within coordinates of
Tprn within coordinates of
Tssr16686 1960 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
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Showing SNP(s) 1 - 52 of 52

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory