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Mouse SNP Summary
Symbol
Name
ID 		Tssr17038
transcription start site region 17038
MGI:5944805

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Showing SNP(s) 1 - 32 of 32

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs252669629
MGI SNP Detail		 Chr2:29778093 Gm75149 within coordinates of
Tssr17038 1985 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs214782262
MGI SNP Detail		 Chr2:29778315 Gm75149 within coordinates of
Tssr17038 1763 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs578545534
MGI SNP Detail		 Chr2:29778862 Gm75149 within coordinates of
Tssr17038 1216 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs581822905
MGI SNP Detail		 Chr2:29778868 Gm75149 within coordinates of
Tssr17038 1210 bp upstream
 SNP A/G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs585885739
MGI SNP Detail		 Chr2:29778874 Gm75149 within coordinates of
Tssr17038 1204 bp upstream
 SNP A/G A G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G A G G G G
rs231651368
MGI SNP Detail		 Chr2:29778914 Gm75149 within coordinates of
Tssr17038 1164 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A A G
rs249224440
MGI SNP Detail		 Chr2:29779370 Cpgi11418 within coordinates of
Gm75149 within coordinates of
Odf2 within coordinates of
Rr554173 within coordinates of
Tssr17038 708 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218091934
MGI SNP Detail		 Chr2:29779384 Cpgi11418 within coordinates of
Gm75149 within coordinates of
Odf2 within coordinates of
Rr554173 within coordinates of
Tssr17038 694 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240529160
MGI SNP Detail		 Chr2:29779572 Cpgi11418 within coordinates of
Gm75149 within coordinates of
Odf2 within coordinates of
Rr554173 within coordinates of
Tssr17038 506 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G A G G G G G G G G G G G
rs29568916
MGI SNP Detail		 Chr2:29779684 Cpgi11418 within coordinates of
Gm75149 within coordinates of
Odf2 within coordinates of
Rr396853 within coordinates of
Rr554173 within coordinates of
Tssr17038 394 bp upstream
 SNP A/G A G
rs225022755
MGI SNP Detail		 Chr2:29779994 Cpgi11418 within coordinates of
Gm75149 within coordinates of
Odf2 within coordinates of
Rr554173 within coordinates of
Tssr17038 84 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G G G G G
rs247901476
MGI SNP Detail		 Chr2:29780132 Cpgi11418 within coordinates of
Gm75149 within coordinates of
Odf2 within coordinates of
Rr554173 within coordinates of
Tssr17038 39 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259027361
MGI SNP Detail		 Chr2:29780287 Cpgi11418 within coordinates of
Gm75149 within coordinates of
Odf2 within coordinates of
Rr554173 within coordinates of
Tssr17038 194 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs220293949
MGI SNP Detail		 Chr2:29780310 Cpgi11418 within coordinates of
Gm75149 within coordinates of
Odf2 within coordinates of
Rr554173 within coordinates of
Tssr17038 217 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238727558
MGI SNP Detail		 Chr2:29780494 Cpgi11418 within coordinates of
Gm75149 within coordinates of
Odf2 within coordinates of
Rr554173 within coordinates of
Tssr17038 401 bp downstream
Tssr17040 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs256691709
MGI SNP Detail		 Chr2:29780911 Cpgi11418 within coordinates of
Odf2 within coordinates of
Rr554174 within coordinates of
Tssr17038 818 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs227841844
MGI SNP Detail		 Chr2:29781184 Odf2 within coordinates of
Rr554174 within coordinates of
Tssr17038 1091 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254460142
MGI SNP Detail		 Chr2:29781195 Odf2 within coordinates of
Rr554174 within coordinates of
Tssr17038 1102 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs265871310
MGI SNP Detail		 Chr2:29781281 Odf2 within coordinates of
Rr554174 within coordinates of
Tssr17038 1188 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232056476
MGI SNP Detail		 Chr2:29781298 Odf2 within coordinates of
Rr554174 within coordinates of
Tssr17038 1205 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245013992
MGI SNP Detail		 Chr2:29781322 Odf2 within coordinates of
Tssr17038 1229 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214754422
MGI SNP Detail		 Chr2:29781417 Odf2 within coordinates of
Tssr17038 1324 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs231796294
MGI SNP Detail		 Chr2:29781443 Odf2 within coordinates of
Tssr17038 1350 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs243325406
MGI SNP Detail		 Chr2:29781549 Odf2 within coordinates of
Tssr17038 1456 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27196585
MGI SNP Detail		 Chr2:29781585 Odf2 within coordinates of
Tssr17038 1492 bp downstream
 SNP A/G A A A A A A A A A A G A A G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243393802
MGI SNP Detail		 Chr2:29781598 Odf2 within coordinates of
Tssr17038 1505 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs27196584
MGI SNP Detail		 Chr2:29781758 Odf2 within coordinates of
Tssr17038 1665 bp downstream
 SNP C/G G G G G G G G G G G C G G C G
rs27196583
MGI SNP Detail		 Chr2:29781912 Odf2 within coordinates of
Tssr17038 1819 bp downstream
 SNP C/T T T C C C C C C C C C C C C C T
rs237940861
MGI SNP Detail		 Chr2:29781917 Odf2 within coordinates of
Tssr17038 1824 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27196582
MGI SNP Detail		 Chr2:29781941 Odf2 within coordinates of
Tssr17038 1848 bp downstream
 SNP C/T C C C C C C T C C C C C C C C
rs220256252
MGI SNP Detail		 Chr2:29782089 Odf2 within coordinates of
Tssr17038 1996 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs27196581
MGI SNP Detail		 Chr2:29782090 Odf2 within coordinates of
Tssr17038 1997 bp downstream
 SNP A/G A A A A A A A A A A G A A G A
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Showing SNP(s) 1 - 32 of 32
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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