About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Tssr19302
transcription start site region 19302
MGI:5947069

<< first < prev1 next > last >>
Showing SNP(s) 1 - 57 of 57

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs220821350
MGI SNP Detail
Chr2:109521982 Bdnf within coordinates of
Rr37268 within coordinates of
Tssr19302 1964 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs27474253
MGI SNP Detail
Chr2:109521987 Bdnf within coordinates of
Rr37268 within coordinates of
Tssr19302 1959 bp upstream
SNP C/G C C C C C C G C C C C C C C C
rs27474252
MGI SNP Detail
Chr2:109522041 Bdnf within coordinates of
Rr37268 within coordinates of
Tssr19302 1905 bp upstream
SNP A/G A A A A A G A A A A G A A G A
rs220304048
MGI SNP Detail
Chr2:109522071 Bdnf within coordinates of
Rr37268 within coordinates of
Tssr19302 1875 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs241576681
MGI SNP Detail
Chr2:109522170 Bdnf within coordinates of
Rr37268 within coordinates of
Tssr19302 1776 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264923949
MGI SNP Detail
Chr2:109522201 Bdnf within coordinates of
Tssr19302 1745 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs226200933
MGI SNP Detail
Chr2:109522255 Bdnf within coordinates of
Tssr19302 1691 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251805560
MGI SNP Detail
Chr2:109522323 Bdnf within coordinates of
Tssr19302 1623 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27474251
MGI SNP Detail
Chr2:109522345 Bdnf within coordinates of
Tssr19302 1601 bp upstream
SNP A/G A A A A A G A A A G A A G A
rs227812116
MGI SNP Detail
Chr2:109522453 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1493 bp upstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs244815747
MGI SNP Detail
Chr2:109522473 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1473 bp upstream
SNP A/G G G G G G G G G G G A A G G G G G G G G G A A G G G G A G G G G G A G G G G G A A G G G G G G G G G G G G
rs249779231
MGI SNP Detail
Chr2:109522598 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1348 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217909005
MGI SNP Detail
Chr2:109523008 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 938 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs240289176
MGI SNP Detail
Chr2:109523128 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 818 bp upstream
SNP A/C C C C C C C C C C C A C C C C C C C C C A A C C C C A C C C C A C C C C C A A C C C C C C C C C C C C
rs27474250
MGI SNP Detail
Chr2:109523196 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 750 bp upstream
SNP C/T T T T T T T C T T T T T T T T
rs215296189
MGI SNP Detail
Chr2:109523334 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 612 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233623903
MGI SNP Detail
Chr2:109523415 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 531 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs578544063
MGI SNP Detail
Chr2:109523467 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 479 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs249744067
MGI SNP Detail
Chr2:109523522 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 424 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214594443
MGI SNP Detail
Chr2:109523523 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 423 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236429206
MGI SNP Detail
Chr2:109523527 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 419 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27474249
MGI SNP Detail
Chr2:109523534 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 412 bp upstream
SNP C/G G G G G G C G G G C G G C G
rs226516778
MGI SNP Detail
Chr2:109523567 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 379 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248796077
MGI SNP Detail
Chr2:109523578 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 368 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs253207830
MGI SNP Detail
Chr2:109523636 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 310 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27474248
MGI SNP Detail
Chr2:109523718 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 228 bp upstream
SNP A/G G A A A A A G A A G G G G G A
rs581537876
MGI SNP Detail
Chr2:109523719 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 227 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585360317
MGI SNP Detail
Chr2:109523725 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 221 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27474247
MGI SNP Detail
Chr2:109523727 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 219 bp upstream
SNP A/G G G G G G A G G G G G G G G G
rs578910547
MGI SNP Detail
Chr2:109523728 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 218 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257986583
MGI SNP Detail
Chr2:109523743 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 203 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227421602
MGI SNP Detail
Chr2:109523860 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 86 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244700729
MGI SNP Detail
Chr2:109523961 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs263978688
MGI SNP Detail
Chr2:109524052 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 83 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs234825121
MGI SNP Detail
Chr2:109524137 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 168 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs27474246
MGI SNP Detail
Chr2:109524167 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 198 bp downstream
SNP A/G G G G G G G A G G G G G G G
rs215924766
MGI SNP Detail
Chr2:109524373 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 404 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs225229857
MGI SNP Detail
Chr2:109524402 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 433 bp downstream
SNP A/G G G G G G G G G G G A G G G G G G G A G A A G G G G A G G G G G A G G G G G A A G G G G G G G A G G G A
rs243911509
MGI SNP Detail
Chr2:109524523 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 554 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214430071
MGI SNP Detail
Chr2:109524606 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 637 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234899602
MGI SNP Detail
Chr2:109524647 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 678 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261654410
MGI SNP Detail
Chr2:109524676 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 707 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs27474245
MGI SNP Detail
Chr2:109524934 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 965 bp downstream
SNP A/T A T T T T T T T T T A A T T
rs243360396
MGI SNP Detail
Chr2:109524987 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1018 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs253100205
MGI SNP Detail
Chr2:109525035 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1066 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs239237544
MGI SNP Detail
Chr2:109525315 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1346 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27474244
MGI SNP Detail
Chr2:109525378 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1409 bp downstream
SNP A/C C C C C C C A C C C C C C C C
rs219694258
MGI SNP Detail
Chr2:109525382 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1413 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241974225
MGI SNP Detail
Chr2:109525393 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1424 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265859429
MGI SNP Detail
Chr2:109525399 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1430 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs233628710
MGI SNP Detail
Chr2:109525492 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1523 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs239121423
MGI SNP Detail
Chr2:109525579 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1610 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257920688
MGI SNP Detail
Chr2:109525661 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1692 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs225270417
MGI SNP Detail
Chr2:109525705 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1736 bp downstream
SNP A/G G G G G G G G G G G A A G G G G G G G G G A A G G G G A G G G G G A G G G G G A A G G G G G G G A G G G G
rs582630743
MGI SNP Detail
Chr2:109525749 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1780 bp downstream
SNP C/T C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C T
rs585730522
MGI SNP Detail
Chr2:109525762 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1793 bp downstream
SNP A/G G G G G G G G G G A A G G G G G G G A G A A G G G G A G G G G G A G G G G G A A G G G G G G G A G G G A
rs244542855
MGI SNP Detail
Chr2:109525773 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1804 bp downstream
SNP A/G A A A A A A A A A G G A A A A A A A G A G G A A A A G A A A A G A A A A A G G A A A A A A A G A A A G
<< first < prev1 next > last >>
Showing SNP(s) 1 - 57 of 57

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
12/17/2024
MGI 6.24
The Jackson Laboratory