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Mouse SNP Summary
Symbol
Name
ID 		Tssr19302
transcription start site region 19302
MGI:5947069

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Showing SNP(s) 1 - 57 of 57

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs220821350
MGI SNP Detail		 Chr2:109521982 Bdnf within coordinates of
Rr37268 within coordinates of
Tssr19302 1964 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs27474253
MGI SNP Detail		 Chr2:109521987 Bdnf within coordinates of
Rr37268 within coordinates of
Tssr19302 1959 bp upstream
 SNP C/G C C C C C C G C C C C C C C C
rs27474252
MGI SNP Detail		 Chr2:109522041 Bdnf within coordinates of
Rr37268 within coordinates of
Tssr19302 1905 bp upstream
 SNP A/G A A A A A G A A A A G A A G A
rs220304048
MGI SNP Detail		 Chr2:109522071 Bdnf within coordinates of
Rr37268 within coordinates of
Tssr19302 1875 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs241576681
MGI SNP Detail		 Chr2:109522170 Bdnf within coordinates of
Rr37268 within coordinates of
Tssr19302 1776 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264923949
MGI SNP Detail		 Chr2:109522201 Bdnf within coordinates of
Tssr19302 1745 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs226200933
MGI SNP Detail		 Chr2:109522255 Bdnf within coordinates of
Tssr19302 1691 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251805560
MGI SNP Detail		 Chr2:109522323 Bdnf within coordinates of
Tssr19302 1623 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27474251
MGI SNP Detail		 Chr2:109522345 Bdnf within coordinates of
Tssr19302 1601 bp upstream
 SNP A/G A A A A A G A A A G A A G A
rs227812116
MGI SNP Detail		 Chr2:109522453 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1493 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs244815747
MGI SNP Detail		 Chr2:109522473 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1473 bp upstream
 SNP A/G G G G G G G G G G G A A G G G G G G G G G A A G G G G A G G G G G A G G G G G A A G G G G G G G G G G G G
rs249779231
MGI SNP Detail		 Chr2:109522598 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1348 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217909005
MGI SNP Detail		 Chr2:109523008 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 938 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs240289176
MGI SNP Detail		 Chr2:109523128 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 818 bp upstream
 SNP A/C C C C C C C C C C C A C C C C C C C C C A A C C C C A C C C C A C C C C C A A C C C C C C C C C C C C
rs27474250
MGI SNP Detail		 Chr2:109523196 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 750 bp upstream
 SNP C/T T T T T T T C T T T T T T T T
rs215296189
MGI SNP Detail		 Chr2:109523334 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 612 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233623903
MGI SNP Detail		 Chr2:109523415 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 531 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs578544063
MGI SNP Detail		 Chr2:109523467 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 479 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs249744067
MGI SNP Detail		 Chr2:109523522 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 424 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214594443
MGI SNP Detail		 Chr2:109523523 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 423 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs236429206
MGI SNP Detail		 Chr2:109523527 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 419 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27474249
MGI SNP Detail		 Chr2:109523534 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 412 bp upstream
 SNP C/G G G G G G C G G G C G G C G
rs226516778
MGI SNP Detail		 Chr2:109523567 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 379 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs248796077
MGI SNP Detail		 Chr2:109523578 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 368 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs253207830
MGI SNP Detail		 Chr2:109523636 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 310 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27474248
MGI SNP Detail		 Chr2:109523718 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 228 bp upstream
 SNP A/G G A A A A A G A A G G G G G A
rs581537876
MGI SNP Detail		 Chr2:109523719 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 227 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs585360317
MGI SNP Detail		 Chr2:109523725 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 221 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27474247
MGI SNP Detail		 Chr2:109523727 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 219 bp upstream
 SNP A/G G G G G G A G G G G G G G G G
rs578910547
MGI SNP Detail		 Chr2:109523728 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 218 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257986583
MGI SNP Detail		 Chr2:109523743 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 203 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227421602
MGI SNP Detail		 Chr2:109523860 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 86 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244700729
MGI SNP Detail		 Chr2:109523961 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs263978688
MGI SNP Detail		 Chr2:109524052 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 83 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs234825121
MGI SNP Detail		 Chr2:109524137 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 168 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs27474246
MGI SNP Detail		 Chr2:109524167 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 198 bp downstream
 SNP A/G G G G G G G A G G G G G G G
rs215924766
MGI SNP Detail		 Chr2:109524373 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 404 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs225229857
MGI SNP Detail		 Chr2:109524402 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 433 bp downstream
 SNP A/G G G G G G G G G G G A G G G G G G G A G A A G G G G A G G G G G A G G G G G A A G G G G G G G A G G G A
rs243911509
MGI SNP Detail		 Chr2:109524523 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 554 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214430071
MGI SNP Detail		 Chr2:109524606 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 637 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234899602
MGI SNP Detail		 Chr2:109524647 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 678 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261654410
MGI SNP Detail		 Chr2:109524676 Bdnf within coordinates of
Cpgi12036 within coordinates of
Rr55360 within coordinates of
Tssr19302 707 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs27474245
MGI SNP Detail		 Chr2:109524934 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 965 bp downstream
 SNP A/T A T T T T T T T T T A A T T
rs243360396
MGI SNP Detail		 Chr2:109524987 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1018 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs253100205
MGI SNP Detail		 Chr2:109525035 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1066 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs239237544
MGI SNP Detail		 Chr2:109525315 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1346 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27474244
MGI SNP Detail		 Chr2:109525378 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1409 bp downstream
 SNP A/C C C C C C C A C C C C C C C C
rs219694258
MGI SNP Detail		 Chr2:109525382 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1413 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241974225
MGI SNP Detail		 Chr2:109525393 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1424 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265859429
MGI SNP Detail		 Chr2:109525399 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1430 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs233628710
MGI SNP Detail		 Chr2:109525492 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1523 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs239121423
MGI SNP Detail		 Chr2:109525579 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1610 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257920688
MGI SNP Detail		 Chr2:109525661 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1692 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs225270417
MGI SNP Detail		 Chr2:109525705 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1736 bp downstream
 SNP A/G G G G G G G G G G G A A G G G G G G G G G A A G G G G A G G G G G A G G G G G A A G G G G G G G A G G G G
rs582630743
MGI SNP Detail		 Chr2:109525749 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1780 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C T
rs585730522
MGI SNP Detail		 Chr2:109525762 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1793 bp downstream
 SNP A/G G G G G G G G G G A A G G G G G G G A G A A G G G G A G G G G G A G G G G G A A G G G G G G G A G G G A
rs244542855
MGI SNP Detail		 Chr2:109525773 Bdnf within coordinates of
Rr55360 within coordinates of
Tssr19302 1804 bp downstream
 SNP A/G A A A A A A A A A G G A A A A A A A G A G G A A A A G A A A A G A A A A A G G A A A A A A A G A A A G
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Showing SNP(s) 1 - 57 of 57
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory