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Mouse SNP Summary
Symbol
Name
ID
Tssr19532
transcription start site region 19532
MGI:5947299

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Showing SNP(s) 1 - 63 of 63

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259497295
MGI SNP Detail
Chr2:117941628 Gm13986 within coordinates of
Rr397201 within coordinates of
Rr55415 within coordinates of
Tssr19532 1944 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228006750
MGI SNP Detail
Chr2:117941634 Gm13986 within coordinates of
Rr397201 within coordinates of
Rr55415 within coordinates of
Tssr19532 1938 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs49673563
MGI SNP Detail
Chr2:117941714 Rr397201 within coordinates of
Rr55415 within coordinates of
Tssr19532 1858 bp upstream
SNP A/G G G A
rs50312449
MGI SNP Detail
Chr2:117941755 Cpgi12075 within coordinates of
Rr397201 within coordinates of
Rr55415 within coordinates of
Tssr19532 1817 bp upstream
SNP G/T G G T
rs253740771
MGI SNP Detail
Chr2:117941808 Cpgi12075 within coordinates of
Rr55415 within coordinates of
Tssr19532 1764 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T C
rs231011257
MGI SNP Detail
Chr2:117941861 Cpgi12075 within coordinates of
Rr55415 within coordinates of
Tssr19532 1711 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250615440
MGI SNP Detail
Chr2:117941957 Cpgi12075 within coordinates of
Rr55415 within coordinates of
Tssr19532 1615 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217038853
MGI SNP Detail
Chr2:117941972 Cpgi12075 within coordinates of
Rr55415 within coordinates of
Tssr19532 1600 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237821478
MGI SNP Detail
Chr2:117942042 Cpgi12075 within coordinates of
Rr55415 within coordinates of
Tssr19532 1530 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27502499
MGI SNP Detail
Chr2:117942104 Cpgi12075 within coordinates of
Rr55415 within coordinates of
Tssr19532 1468 bp upstream
SNP A/G G G G G G G G G G A G G A G
rs217448731
MGI SNP Detail
Chr2:117942255 Cpgi12075 within coordinates of
Rr55415 within coordinates of
Tssr19532 1317 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A G A A A A A A G A A A A A A A G A A A
rs584959756
MGI SNP Detail
Chr2:117942285 Cpgi12075 within coordinates of
Rr55415 within coordinates of
Tssr19532 1287 bp upstream
SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs587384922
MGI SNP Detail
Chr2:117942287 Cpgi12075 within coordinates of
Rr55415 within coordinates of
Tssr19532 1285 bp upstream
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs235638201
MGI SNP Detail
Chr2:117942317 Cpgi12075 within coordinates of
Rr55415 within coordinates of
Tssr19532 1255 bp upstream
SNP C/T C C C C C C C C C C C C C C C T C C C C C C C C C C T C C C C C C C C C
rs250608397
MGI SNP Detail
Chr2:117942369 Cpgi12075 within coordinates of
Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19528 within coordinates of
Tssr19532 1203 bp upstream
SNP A/G G G G A A A A A A G A A A A A A A A A G A A A A A A A A A A G A A A A A A A A A A A A A A A G A A A
rs27502498
MGI SNP Detail
Chr2:117942412 Cpgi12075 within coordinates of
Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 1160 bp upstream
SNP A/G A G G G G G G G G G G G G G
rs239280089
MGI SNP Detail
Chr2:117942480 Cpgi12075 within coordinates of
Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 1092 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C
rs257321998
MGI SNP Detail
Chr2:117942538 Cpgi12075 within coordinates of
Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 1034 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs225548748
MGI SNP Detail
Chr2:117942616 Cpgi12075 within coordinates of
Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 956 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs27502497
MGI SNP Detail
Chr2:117942627 Cpgi12075 within coordinates of
Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 945 bp upstream
SNP A/T T T T T T T A T A A A T T A T T
rs260247254
MGI SNP Detail
Chr2:117942691 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 881 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C
rs221747981
MGI SNP Detail
Chr2:117942707 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 865 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs236393403
MGI SNP Detail
Chr2:117942723 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 849 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264536760
MGI SNP Detail
Chr2:117942850 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19529 within coordinates of
Tssr19532 722 bp upstream
SNP A/G G G G G G A A G A A G G G G G G G G G G G
rs230678589
MGI SNP Detail
Chr2:117942851 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19529 within coordinates of
Tssr19532 721 bp upstream
SNP A/G A A G A G G G G A G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A A A G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs254982003
MGI SNP Detail
Chr2:117942917 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 655 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263483990
MGI SNP Detail
Chr2:117942946 D2Mit62 within coordinates of
Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 626 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231984019
MGI SNP Detail
Chr2:117943309 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 263 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T G
rs248779101
MGI SNP Detail
Chr2:117943317 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 255 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A C
rs216701311
MGI SNP Detail
Chr2:117943340 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 232 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228580271
MGI SNP Detail
Chr2:117943464 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 108 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T C
rs27502496
MGI SNP Detail
Chr2:117943600 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 14 bp downstream
SNP A/G G G G G G G G G G A G G G G
rs27502495
MGI SNP Detail
Chr2:117943654 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 68 bp downstream
SNP C/T T T T T T C T T C C C T T C T T
rs212357879
MGI SNP Detail
Chr2:117943683 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 97 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27502494
MGI SNP Detail
Chr2:117943714 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 128 bp downstream
SNP G/T G G G G G G G G T G G G G
rs237136415
MGI SNP Detail
Chr2:117943875 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 289 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27502493
MGI SNP Detail
Chr2:117943887 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 301 bp downstream
SNP C/T C C C C C C C C C C C C T C
rs217019322
MGI SNP Detail
Chr2:117943890 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 304 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A T
rs233142348
MGI SNP Detail
Chr2:117943989 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 403 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs253511080
MGI SNP Detail
Chr2:117944018 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 432 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs222319524
MGI SNP Detail
Chr2:117944051 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 465 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs236331970
MGI SNP Detail
Chr2:117944158 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 572 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255147266
MGI SNP Detail
Chr2:117944177 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 591 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222754402
MGI SNP Detail
Chr2:117944405 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 819 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27502492
MGI SNP Detail
Chr2:117944432 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 846 bp downstream
SNP A/G A A A A A A A A A G A A G A
rs27502491
MGI SNP Detail
Chr2:117944472 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 886 bp downstream
SNP A/C A A A A A A A A C A A C A
rs227220295
MGI SNP Detail
Chr2:117944635 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 1049 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs242676210
MGI SNP Detail
Chr2:117944636 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 1050 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs260600451
MGI SNP Detail
Chr2:117944675 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 1089 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs224928788
MGI SNP Detail
Chr2:117944689 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 1103 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs252557039
MGI SNP Detail
Chr2:117944739 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 1153 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212074933
MGI SNP Detail
Chr2:117944788 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 1202 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231266634
MGI SNP Detail
Chr2:117944811 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 1225 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250876152
MGI SNP Detail
Chr2:117944821 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 1235 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs584175262
MGI SNP Detail
Chr2:117944920 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 1334 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs217420396
MGI SNP Detail
Chr2:117944968 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 1382 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs49683452
MGI SNP Detail
Chr2:117945009 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 1423 bp downstream
SNP C/T T T T C T
rs47183139
MGI SNP Detail
Chr2:117945026 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 1440 bp downstream
SNP G/T G G G T G
rs27502490
MGI SNP Detail
Chr2:117945074 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 1488 bp downstream
SNP A/G A A A A A A G A A G G G A G A A
rs48898467
MGI SNP Detail
Chr2:117945118 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 1532 bp downstream
SNP A/T T T T A T
rs33190346
MGI SNP Detail
Chr2:117945344 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 1758 bp downstream
SNP C/T C C T C T C
rs27502489
MGI SNP Detail
Chr2:117945391 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 1805 bp downstream
SNP C/T C C C C C C C T T C C T T C C C C C
rs245638849
MGI SNP Detail
Chr2:117945392 Rr55415 within coordinates of
Thbs1 within coordinates of
Tssr19532 1806 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
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Showing SNP(s) 1 - 63 of 63

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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory