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Mouse SNP Summary
Symbol
Name
ID 		Tssr19567
transcription start site region 19567
MGI:5947334

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Showing SNP(s) 1 - 72 of 72

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239187972
MGI SNP Detail		 Chr2:118492207 Gm75659 within coordinates of
Tssr19567 1996 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs257391483
MGI SNP Detail		 Chr2:118492214 Gm75659 within coordinates of
Tssr19567 1989 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216177059
MGI SNP Detail		 Chr2:118492224 Gm75659 within coordinates of
Tssr19567 1979 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233217091
MGI SNP Detail		 Chr2:118492240 Gm75659 within coordinates of
Tssr19567 1963 bp upstream
 SNP A/G A A A A A A A A G A G G A A A A A A G G G A G A A A A A A G A A A G G A G G A A G A A A A A A A G A A G G
rs253541614
MGI SNP Detail		 Chr2:118492292 Gm75659 within coordinates of
Tssr19567 1911 bp upstream
 SNP C/G/T T T C C C C C G T G G C C C C C C G C G C C C C C C C C C C T C C G C G G C C C C C C C C C C C C G
rs241789441
MGI SNP Detail		 Chr2:118492375 Gm75659 within coordinates of
Tssr19567 1828 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs3149725
MGI SNP Detail		 Chr2:118492537 Gm75659 within coordinates of
Tssr19567 1666 bp upstream
 SNP C/T C C C C C C C T C C C T T C C C C
rs3144512
MGI SNP Detail		 Chr2:118492666 Gm75659 within coordinates of
Tssr19567 1537 bp upstream
 SNP A/C A A C A C A
rs3149726
MGI SNP Detail		 Chr2:118492678 Gm75659 within coordinates of
Tssr19567 1525 bp upstream
 SNP A/G G G G G G G G A G G G A A A G G A G G
rs259821354
MGI SNP Detail		 Chr2:118492686 Gm75659 within coordinates of
Tssr19567 1517 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227245339
MGI SNP Detail		 Chr2:118492691 Gm75659 within coordinates of
Tssr19567 1512 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs3149727
MGI SNP Detail		 Chr2:118492753 Gm75659 within coordinates of
Tssr19567 1450 bp upstream
 SNP C/T C T C T C
rs260623750
MGI SNP Detail		 Chr2:118492886 Gm75659 within coordinates of
Tssr19567 1317 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229147608
MGI SNP Detail		 Chr2:118492914 Gm75659 within coordinates of
Tssr19567 1289 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27423795
MGI SNP Detail		 Chr2:118493128 Gm75659 within coordinates of
Tssr19567 1075 bp upstream
 SNP A/C A A A A C C A A A A A C A A C
rs3149728
MGI SNP Detail		 Chr2:118493213 Gm75659 within coordinates of
Rr55423 within coordinates of
Tssr19567 990 bp upstream
 SNP C/T T T T C T C T
rs3149729
MGI SNP Detail		 Chr2:118493237 Gm75659 within coordinates of
Rr55423 within coordinates of
Tssr19567 966 bp upstream
 SNP C/G C C C G C G C
rs3149730
MGI SNP Detail		 Chr2:118493305 Gm75659 within coordinates of
Rr55423 within coordinates of
Tssr19567 898 bp upstream
 SNP G/T T T T T T G G G T T G G G G T G T G
rs216065725
MGI SNP Detail		 Chr2:118493386 Gm75659 within coordinates of
Rr55423 within coordinates of
Tssr19567 817 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs3149731
MGI SNP Detail		 Chr2:118493433 Gm75659 within coordinates of
Rr55423 within coordinates of
Tssr19567 770 bp upstream
 SNP C/G C C C G C G C
rs247664671
MGI SNP Detail		 Chr2:118493476 Gm75659 within coordinates of
Rr55423 within coordinates of
Tssr19567 727 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs3149732
MGI SNP Detail		 Chr2:118493548 Gm75659 within coordinates of
Rr55423 within coordinates of
Tssr19567 655 bp upstream
 SNP A/T T T T T T A A A A T T A A A A T A T A
rs237530367
MGI SNP Detail		 Chr2:118493590 Gm75659 within coordinates of
Rr55423 within coordinates of
Tssr19567 613 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs3144513
MGI SNP Detail		 Chr2:118493680 Gm75659 within coordinates of
Rr55423 within coordinates of
Tssr19567 523 bp upstream
 SNP A/G G G G A A A A G G A A A A G A G A
rs3149733
MGI SNP Detail		 Chr2:118493800 Cpgi12085 within coordinates of
Gm75659 within coordinates of
Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19566 within coordinates of
Tssr19567 403 bp upstream
 SNP A/T A A A A A A T A A A T T T A A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs235860847
MGI SNP Detail		 Chr2:118493862 Cpgi12085 within coordinates of
Gm75659 within coordinates of
Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 341 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs27423794
MGI SNP Detail		 Chr2:118493900 Cpgi12085 within coordinates of
Gm75659 within coordinates of
Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 303 bp upstream
 SNP C/G G G G G G G C G G G G G G G G
rs27423793
MGI SNP Detail		 Chr2:118493934 Cpgi12085 within coordinates of
Gm75659 within coordinates of
Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 269 bp upstream
 SNP A/C C C C C C C C C C A C C A
rs27423792
MGI SNP Detail		 Chr2:118493942 Cpgi12085 within coordinates of
Gm75659 within coordinates of
Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 261 bp upstream
 SNP A/G G G G G A A G G G G G A G G G
rs260518985
MGI SNP Detail		 Chr2:118494103 Gm75659 within coordinates of
Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 100 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27423791
MGI SNP Detail		 Chr2:118494265 Gm75659 within coordinates of
Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 22 bp downstream
 SNP A/G G G G G G G A G G G G G G G G
rs3149734
MGI SNP Detail		 Chr2:118494337 Gm75659 within coordinates of
Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 94 bp downstream
 SNP A/G A A A A A G G G G A A G G G G A G A G
rs261585660
MGI SNP Detail		 Chr2:118494387 Gm75659 within coordinates of
Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 144 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231291056
MGI SNP Detail		 Chr2:118494433 Gm75659 within coordinates of
Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 190 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs243870143
MGI SNP Detail		 Chr2:118494457 Gm75659 within coordinates of
Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 214 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27423790
MGI SNP Detail		 Chr2:118494497 Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 254 bp downstream
 SNP A/C A C C C C C C C C C C C C C
rs3149735
MGI SNP Detail		 Chr2:118494517 Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 274 bp downstream
 SNP A/G A A A A A G G G A A A G G G G A G A G
rs226984536
MGI SNP Detail		 Chr2:118494524 Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 281 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs3144516
MGI SNP Detail		 Chr2:118494573 Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 330 bp downstream
 SNP C/G G G G G G C C C C G G C C C C G C G C
rs218426997
MGI SNP Detail		 Chr2:118494648 Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 405 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs3144517
MGI SNP Detail		 Chr2:118494778 Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 535 bp downstream
 SNP C/G G G G G G C C C C G G C C C C G C G C
rs3144518
MGI SNP Detail		 Chr2:118494801 Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 558 bp downstream
 SNP C/T T T T T C C C C T T C C C C T C T C
rs215149473
MGI SNP Detail		 Chr2:118494911 Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 668 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs231279334
MGI SNP Detail		 Chr2:118494958 Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 715 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253268652
MGI SNP Detail		 Chr2:118494970 Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 727 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs3144519
MGI SNP Detail		 Chr2:118495005 Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 762 bp downstream
 SNP C/T T T C T C T
rs236144947
MGI SNP Detail		 Chr2:118495153 Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 910 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254302936
MGI SNP Detail		 Chr2:118495276 Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 1033 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs3149736
MGI SNP Detail		 Chr2:118495303 Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 1060 bp downstream
 SNP A/G G G G G G A G G A A G G G G G G
rs240979724
MGI SNP Detail		 Chr2:118495306 Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 1063 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265284065
MGI SNP Detail		 Chr2:118495319 Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 1076 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs27423789
MGI SNP Detail		 Chr2:118495357 Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 1114 bp downstream
 SNP A/C C C C C C C C C C C A C C C C
rs222514239
MGI SNP Detail		 Chr2:118495364 Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 1121 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237700948
MGI SNP Detail		 Chr2:118495448 Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 1205 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs258170165
MGI SNP Detail		 Chr2:118495470 Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 1227 bp downstream
 SNP A/C A A A A C A A A A A C C C C C C A A A A A A A C C A C A A C A A A A A A A A A A A A A A C A A A A
rs227021309
MGI SNP Detail		 Chr2:118495474 Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 1231 bp downstream
 SNP A/C A A A A C A A A A A C C C C C C A C A A C A A A A C C C A A C A A A A A A C A A A A A A A A A A A A
rs586710601
MGI SNP Detail		 Chr2:118495489 Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 1246 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs49875161
MGI SNP Detail		 Chr2:118495491 Pak6 within coordinates of
Rr55423 within coordinates of
Tssr19567 1248 bp downstream
 SNP A A A
rs27423788
MGI SNP Detail		 Chr2:118495610 Pak6 within coordinates of
Tssr19567 1367 bp downstream
 SNP C/T T T T T T T T T T C C C T T C T T
rs229594268
MGI SNP Detail		 Chr2:118495651 Pak6 within coordinates of
Tssr19567 1408 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249325780
MGI SNP Detail		 Chr2:118495654 Pak6 within coordinates of
Tssr19567 1411 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs3144520
MGI SNP Detail		 Chr2:118495664 Pak6 within coordinates of
Tssr19567 1421 bp downstream
 SNP C/G G G G G G G C G G G C C C G G C G G
rs226147219
MGI SNP Detail		 Chr2:118495711 Pak6 within coordinates of
Tssr19567 1468 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247000319
MGI SNP Detail		 Chr2:118495853 Pak6 within coordinates of
Tssr19567 1610 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs214846463
MGI SNP Detail		 Chr2:118495934 Pak6 within coordinates of
Tssr19567 1691 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236187153
MGI SNP Detail		 Chr2:118496007 Pak6 within coordinates of
Tssr19567 1764 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs3144521
MGI SNP Detail		 Chr2:118496013 Pak6 within coordinates of
Tssr19567 1770 bp downstream
 SNP A/G A A G A G A
rs212568135
MGI SNP Detail		 Chr2:118496043 Pak6 within coordinates of
Tssr19567 1800 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs3144522
MGI SNP Detail		 Chr2:118496098 Pak6 within coordinates of
Tssr19567 1855 bp downstream
 SNP C/T C C T C T C
rs580566476
MGI SNP Detail		 Chr2:118496140 Pak6 within coordinates of
Tssr19567 1897 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs3149737
MGI SNP Detail		 Chr2:118496187 Pak6 within coordinates of
Tssr19567 1944 bp downstream
 SNP A/C A A A A C C C C A A C C C C A C A C
rs27423787
MGI SNP Detail		 Chr2:118496192 Pak6 within coordinates of
Tssr19567 1949 bp downstream
 SNP A/C C C C A A A C C C C A C C A
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Showing SNP(s) 1 - 72 of 72
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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