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Mouse SNP Summary
Symbol
Name
ID 		Tssr20369
transcription start site region 20369
MGI:5948136

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Showing SNP(s) 1 - 50 of 50

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216262060
MGI SNP Detail		 Chr2:135499171 Tssr20369 1908 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C
rs232592532
MGI SNP Detail		 Chr2:135499255 Tssr20369 1824 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257507059
MGI SNP Detail		 Chr2:135499274 Tssr20369 1805 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs213943340
MGI SNP Detail		 Chr2:135499344 Tssr20369 1735 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs235213528
MGI SNP Detail		 Chr2:135499452 Tssr20369 1627 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs260701479
MGI SNP Detail		 Chr2:135499521 Tssr20369 1558 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs223395985
MGI SNP Detail		 Chr2:135499589 Tssr20369 1490 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241866665
MGI SNP Detail		 Chr2:135499785 Tssr20369 1294 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs253608285
MGI SNP Detail		 Chr2:135499846 Tssr20369 1233 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs236636336
MGI SNP Detail		 Chr2:135499862 Tssr20369 1217 bp upstream
 SNP C/T C T
rs220972272
MGI SNP Detail		 Chr2:135499883 Tssr20369 1196 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs47658270
MGI SNP Detail		 Chr2:135499959 Tssr20369 1120 bp upstream
 SNP T T T T
rs247917886
MGI SNP Detail		 Chr2:135500042 Rr55690 within coordinates of
Tssr20369 1037 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs262794930
MGI SNP Detail		 Chr2:135500114 Rr55690 within coordinates of
Tssr20369 965 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs230431307
MGI SNP Detail		 Chr2:135500160 Rr55690 within coordinates of
Tssr20369 919 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs579558709
MGI SNP Detail		 Chr2:135500172 Rr55690 within coordinates of
Tssr20369 907 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254049350
MGI SNP Detail		 Chr2:135500267 Rr55690 within coordinates of
Tssr20369 812 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs229508753
MGI SNP Detail		 Chr2:135500329 Rr55690 within coordinates of
Tssr20369 750 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs246931181
MGI SNP Detail		 Chr2:135500466 Cpgi12321 within coordinates of
Rr55690 within coordinates of
Tssr20369 613 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T C C C T T T C T T T T T T C T T T T T T T C C T C
rs216286263
MGI SNP Detail		 Chr2:135500517 Cpgi12321 within coordinates of
Rr55690 within coordinates of
Tssr20369 562 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231956316
MGI SNP Detail		 Chr2:135500566 Cpgi12321 within coordinates of
Rr55690 within coordinates of
Tssr20369 513 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs255872381
MGI SNP Detail		 Chr2:135500663 Cpgi12321 within coordinates of
Rr55690 within coordinates of
Tssr20369 416 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213406641
MGI SNP Detail		 Chr2:135500740 Cpgi12321 within coordinates of
Rr55690 within coordinates of
Tssr20369 339 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A G G A A A A G A A A A A A G A A A A A A A G A A A A
rs236828497
MGI SNP Detail		 Chr2:135500907 Cpgi12321 within coordinates of
Rr55690 within coordinates of
Tssr20369 172 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G C C C G G G G C G G G G G G C G G G G G G G C C G C
rs582937979
MGI SNP Detail		 Chr2:135501095 Cpgi12321 within coordinates of
Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 1 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G T G T G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255317677
MGI SNP Detail		 Chr2:135501119 Cpgi12321 within coordinates of
Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 25 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G T G T
rs586610240
MGI SNP Detail		 Chr2:135501291 Cpgi12321 within coordinates of
Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 197 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T
rs581012534
MGI SNP Detail		 Chr2:135501383 Cpgi12321 within coordinates of
Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 289 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A
rs217183223
MGI SNP Detail		 Chr2:135501385 Cpgi12321 within coordinates of
Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 291 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C
rs584582702
MGI SNP Detail		 Chr2:135501453 Cpgi12321 within coordinates of
Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 359 bp downstream
 SNP C/T C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C
rs235445904
MGI SNP Detail		 Chr2:135501459 Cpgi12321 within coordinates of
Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 365 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C
rs587280733
MGI SNP Detail		 Chr2:135501473 Cpgi12321 within coordinates of
Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 379 bp downstream
Tssr20371 within coordinates of
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T
rs253464329
MGI SNP Detail		 Chr2:135501495 Cpgi12321 within coordinates of
Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 401 bp downstream
Tssr20371 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G A G A
rs221007512
MGI SNP Detail		 Chr2:135501640 Cpgi12321 within coordinates of
Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 546 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
rs236927346
MGI SNP Detail		 Chr2:135501768 Cpgi12321 within coordinates of
Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 674 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs262001747
MGI SNP Detail		 Chr2:135501913 Cpgi12321 within coordinates of
Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 819 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs6331693
MGI SNP Detail		 Chr2:135502057 Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 963 bp downstream
 SNP A/C A C
rs245106806
MGI SNP Detail		 Chr2:135502171 Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 1077 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs6332690
MGI SNP Detail		 Chr2:135502189 Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 1095 bp downstream
 SNP C/T C T
rs254079651
MGI SNP Detail		 Chr2:135502324 Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 1230 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T A A T T T T A T T T T T T T T T T T T T T A T T T T
rs222847377
MGI SNP Detail		 Chr2:135502368 Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 1274 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241090952
MGI SNP Detail		 Chr2:135502409 Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 1315 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs258345093
MGI SNP Detail		 Chr2:135502474 Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 1380 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs232443954
MGI SNP Detail		 Chr2:135502504 Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 1410 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251904615
MGI SNP Detail		 Chr2:135502635 Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 1541 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs265166535
MGI SNP Detail		 Chr2:135502671 Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 1577 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T
rs228342276
MGI SNP Detail		 Chr2:135502808 Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 1714 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243182655
MGI SNP Detail		 Chr2:135502851 Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 1757 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217217582
MGI SNP Detail		 Chr2:135502918 Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 1824 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs235314904
MGI SNP Detail		 Chr2:135503027 Plcb4 within coordinates of
Rr55690 within coordinates of
Tssr20369 1933 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G T G G G G
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Showing SNP(s) 1 - 50 of 50
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory