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Mouse SNP Summary
Symbol
Name
ID
Tssr21141
transcription start site region 21141
MGI:5948908

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs225505652
MGI SNP Detail
Chr2:155983955 Nfs1 within coordinates of
Tssr21141 1988 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245536071
MGI SNP Detail
Chr2:155983981 Nfs1 within coordinates of
Tssr21141 1962 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs266180131
MGI SNP Detail
Chr2:155984005 Nfs1 within coordinates of
Tssr21141 1938 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27308488
MGI SNP Detail
Chr2:155984203 Nfs1 within coordinates of
Tssr21141 1740 bp upstream
SNP C/T T T T T T T C T T T T T T T T
rs238100615
MGI SNP Detail
Chr2:155984291 Nfs1 within coordinates of
Tssr21141 1652 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs581249259
MGI SNP Detail
Chr2:155984376 Nfs1 within coordinates of
Tssr21141 1567 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs27308487
MGI SNP Detail
Chr2:155984434 Nfs1 within coordinates of
Tssr21141 1509 bp upstream
SNP C/G C G G C G C C G C G G C C G C
rs578845329
MGI SNP Detail
Chr2:155984500 Nfs1 within coordinates of
Tssr21141 1443 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs256094604
MGI SNP Detail
Chr2:155984534 Nfs1 within coordinates of
Tssr21141 1409 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226572354
MGI SNP Detail
Chr2:155984596 Nfs1 within coordinates of
Tssr21141 1347 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs244963461
MGI SNP Detail
Chr2:155984614 Nfs1 within coordinates of
Tssr21141 1329 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs216562725
MGI SNP Detail
Chr2:155984634 Nfs1 within coordinates of
Tssr21141 1309 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs580924036
MGI SNP Detail
Chr2:155984683 Nfs1 within coordinates of
Tssr21141 1260 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231942457
MGI SNP Detail
Chr2:155984796 Nfs1 within coordinates of
Tssr21141 1147 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs254507315
MGI SNP Detail
Chr2:155984797 Nfs1 within coordinates of
Tssr21141 1146 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs217780948
MGI SNP Detail
Chr2:155984837 Nfs1 within coordinates of
Rr39723 within coordinates of
Rr55928 within coordinates of
Tssr21141 1106 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230426239
MGI SNP Detail
Chr2:155984853 Nfs1 within coordinates of
Rr39723 within coordinates of
Rr55928 within coordinates of
Tssr21141 1090 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T T
rs227508589
MGI SNP Detail
Chr2:155984877 Nfs1 within coordinates of
Rr39723 within coordinates of
Rr55928 within coordinates of
Tssr21141 1066 bp upstream
SNP C/G C G
rs214078910
MGI SNP Detail
Chr2:155984910 Nfs1 within coordinates of
Rr39723 within coordinates of
Rr55928 within coordinates of
Tssr21141 1033 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G
rs232504150
MGI SNP Detail
Chr2:155984940 Nfs1 within coordinates of
Rr39723 within coordinates of
Rr55928 within coordinates of
Tssr21141 1003 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T T G G T G G T G T G G G G G G
rs262200169
MGI SNP Detail
Chr2:155984943 Nfs1 within coordinates of
Rr39723 within coordinates of
Rr55928 within coordinates of
Tssr21141 1000 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27308486
MGI SNP Detail
Chr2:155985002 Nfs1 within coordinates of
Rr55928 within coordinates of
Tssr21141 941 bp upstream
SNP C/T C C T T C T C T C T C T T T C C T C C
rs248214467
MGI SNP Detail
Chr2:155985045 Nfs1 within coordinates of
Rr55928 within coordinates of
Tssr21141 898 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27308485
MGI SNP Detail
Chr2:155985065 Nfs1 within coordinates of
Rr55928 within coordinates of
Tssr21141 878 bp upstream
SNP A/T T T A A T A T A A A A A T T T T T
rs222807842
MGI SNP Detail
Chr2:155985075 Nfs1 within coordinates of
Rr55928 within coordinates of
Tssr21141 868 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238227506
MGI SNP Detail
Chr2:155985121 Nfs1 within coordinates of
Rr55928 within coordinates of
Tssr21141 822 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs256130396
MGI SNP Detail
Chr2:155985167 Nfs1 within coordinates of
Rr55928 within coordinates of
Tssr21141 776 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27308484
MGI SNP Detail
Chr2:155985274 Nfs1 within coordinates of
Rr55928 within coordinates of
Tssr21141 669 bp upstream
SNP A/T A A T T A T A T T T A T T T A A T A T
rs243132787
MGI SNP Detail
Chr2:155985348 Nfs1 within coordinates of
Rr55928 within coordinates of
Tssr21141 595 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs265698430
MGI SNP Detail
Chr2:155985355 Nfs1 within coordinates of
Rr55928 within coordinates of
Tssr21141 588 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs231545567
MGI SNP Detail
Chr2:155985366 Nfs1 within coordinates of
Rr55928 within coordinates of
Tssr21141 577 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs259964471
MGI SNP Detail
Chr2:155985390 Nfs1 within coordinates of
Rr55928 within coordinates of
Tssr21141 553 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs27308483
MGI SNP Detail
Chr2:155985392 Nfs1 within coordinates of
Rr55928 within coordinates of
Tssr21141 551 bp upstream
SNP A/G G G G G G G G G G G G G G A G
rs27308482
MGI SNP Detail
Chr2:155985402 Nfs1 within coordinates of
Rr55928 within coordinates of
Tssr21141 541 bp upstream
SNP A/T T T A A A A A A A A A A A A A A A
rs242091112
MGI SNP Detail
Chr2:155985616 Cpgi12543 within coordinates of
Nfs1 within coordinates of
Rr55928 within coordinates of
Tssr21141 327 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs214116295
MGI SNP Detail
Chr2:155985696 Cpgi12543 within coordinates of
Nfs1 within coordinates of
Rr55928 within coordinates of
Tssr21141 247 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs231108552
MGI SNP Detail
Chr2:155985730 Cpgi12543 within coordinates of
Nfs1 within coordinates of
Rr55928 within coordinates of
Tssr21141 213 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27308481
MGI SNP Detail
Chr2:155985768 Cpgi12543 within coordinates of
Nfs1 within coordinates of
Rr55928 within coordinates of
Tssr21141 175 bp upstream
SNP G/T G T T G T G G T G T T T G G G G G
rs217557871
MGI SNP Detail
Chr2:155985816 Cpgi12543 within coordinates of
Nfs1 within coordinates of
Rr55928 within coordinates of
Tssr21141 127 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238161861
MGI SNP Detail
Chr2:155985825 Cpgi12543 within coordinates of
Nfs1 within coordinates of
Rr55928 within coordinates of
Tssr21141 118 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs27308480
MGI SNP Detail
Chr2:155985841 Cpgi12543 within coordinates of
Nfs1 within coordinates of
Rr55928 within coordinates of
Tssr21141 102 bp upstream
SNP A/C C C A A C A C A C A C A A A A C C C C C
rs222946333
MGI SNP Detail
Chr2:155985882 Cpgi12543 within coordinates of
Nfs1 within coordinates of
Rr55928 within coordinates of
Tssr21141 61 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27308479
MGI SNP Detail
Chr2:155985919 Cpgi12543 within coordinates of
Nfs1 within coordinates of
Rr55928 within coordinates of
Tssr21141 24 bp upstream
SNP C/G C C C C C C C C C C C C C C G
rs249756485
MGI SNP Detail
Chr2:155986065 Cpgi12543 within coordinates of
Nfs1 within coordinates of
Rr55928 within coordinates of
Tssr21141 110 bp downstream
Tssr27032 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs220358614
MGI SNP Detail
Chr2:155986109 Cpgi12543 within coordinates of
Romo1 within coordinates of
Rr55928 within coordinates of
Tssr21141 154 bp downstream
Tssr27032 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27308478
MGI SNP Detail
Chr2:155986190 Cpgi12543 within coordinates of
Romo1 within coordinates of
Rr55928 within coordinates of
Tssr21141 235 bp downstream
SNP A/C C C C C C C C C C C C C C C A
rs263561305
MGI SNP Detail
Chr2:155986218 Cpgi12543 within coordinates of
Romo1 within coordinates of
Rr55928 within coordinates of
Tssr21141 263 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224227782
MGI SNP Detail
Chr2:155986340 Cpgi12543 within coordinates of
Romo1 within coordinates of
Rr55928 within coordinates of
Tssr21141 385 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27308477
MGI SNP Detail
Chr2:155986366 Cpgi12543 within coordinates of
Romo1 within coordinates of
Rr55928 within coordinates of
Tssr21141 411 bp downstream
SNP A/C C C A A C A C A A A C A A A C C A C C
rs258889735
MGI SNP Detail
Chr2:155986735 Romo1 within coordinates of
Rr55928 within coordinates of
Tssr21141 780 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27308476
MGI SNP Detail
Chr2:155986782 Romo1 within coordinates of
Rr55928 within coordinates of
Tssr21141 827 bp downstream
SNP A/G G G G G G G A G G G G G G G G
rs242126881
MGI SNP Detail
Chr2:155986796 Romo1 within coordinates of
Rr55928 within coordinates of
Tssr21141 841 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs256010456
MGI SNP Detail
Chr2:155986898 Romo1 within coordinates of
Rr55928 within coordinates of
Tssr21141 943 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs229441861
MGI SNP Detail
Chr2:155986976 Romo1 within coordinates of
Rr55928 within coordinates of
Tssr21141 1021 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs257803966
MGI SNP Detail
Chr2:155986979 Romo1 within coordinates of
Rr55928 within coordinates of
Tssr21141 1024 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs3711077
MGI SNP Detail
Chr2:155986998 Romo1 within coordinates of
Rr55928 within coordinates of
Tssr21141 1043 bp downstream
SNP A/G A A G G G G A
rs240481640
MGI SNP Detail
Chr2:155987292 Romo1 within coordinates of
Rr55928 within coordinates of
Tssr21141 1337 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27308475
MGI SNP Detail
Chr2:155987338 Romo1 within coordinates of
Rr55928 within coordinates of
Tssr21141 1383 bp downstream
SNP A/G G G A A A G A G A G A A A G G G G G
rs216945965
MGI SNP Detail
Chr2:155987362 Romo1 within coordinates of
Rr55928 within coordinates of
Tssr21141 1407 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs230959872
MGI SNP Detail
Chr2:155987422 Romo1 within coordinates of
Tssr21141 1467 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249793335
MGI SNP Detail
Chr2:155987431 Romo1 within coordinates of
Tssr21141 1476 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220406779
MGI SNP Detail
Chr2:155987432 Romo1 within coordinates of
Tssr21141 1477 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs584349007
MGI SNP Detail
Chr2:155987443 Romo1 within coordinates of
Tssr21141 1488 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs578337005
MGI SNP Detail
Chr2:155987459 Romo1 within coordinates of
Tssr21141 1504 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs27308474
MGI SNP Detail
Chr2:155987484 Romo1 within coordinates of
Tssr21141 1529 bp downstream
SNP A/T T T A A T A T T A T A A A T T A T T
rs263423298
MGI SNP Detail
Chr2:155987509 Romo1 within coordinates of
Tssr21141 1554 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs224261444
MGI SNP Detail
Chr2:155987916 Tssr21141 1961 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251316891
MGI SNP Detail
Chr2:155987931 Tssr21141 1976 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
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Showing SNP(s) 1 - 68 of 68

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory

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