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Mouse SNP Summary
Symbol
Name
ID 		Tssr21283
transcription start site region 21283
MGI:5949050

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Showing SNP(s) 1 - 50 of 50

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27338077
MGI SNP Detail		 Chr2:157402295 Blcap within coordinates of
Cpgi12575 within coordinates of
Nnat within coordinates of
Tssr21283 1919 bp upstream
 SNP A/G A A A A G A A A A G G A A G A
rs50105938
MGI SNP Detail		 Chr2:157402552 Blcap within coordinates of
Nnat within coordinates of
Tssr21283 1662 bp upstream
 SNP A/C C A A
rs27338076
MGI SNP Detail		 Chr2:157402615 Blcap within coordinates of
Nnat within coordinates of
Tssr21283 1599 bp upstream
 SNP A/T A A A A A A A A A A T A A A A
rs246460349
MGI SNP Detail		 Chr2:157402629 Blcap within coordinates of
Nnat within coordinates of
Tssr21283 1585 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263078134
MGI SNP Detail		 Chr2:157402650 Blcap within coordinates of
Nnat within coordinates of
Tssr21283 1564 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs224869628
MGI SNP Detail		 Chr2:157402669 Blcap within coordinates of
Nnat within coordinates of
Tssr21283 1545 bp upstream
 SNP A/T A A A A A A A A T A A A A A A A A A A A A A T A A A A T T A A A A A A A A A A A T A A A T A T A A A A A A
rs240749692
MGI SNP Detail		 Chr2:157402883 Blcap within coordinates of
Nnat within coordinates of
Tssr21283 1331 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G
rs221553028
MGI SNP Detail		 Chr2:157402950 Blcap within coordinates of
Nnat within coordinates of
Tssr21283 1264 bp upstream
 SNP A/G G A
rs27338075
MGI SNP Detail		 Chr2:157403036 Blcap within coordinates of
Nnat within coordinates of
Tssr21283 1178 bp upstream
 SNP A/G G G G G G G G G G G G G G A G
rs223516249
MGI SNP Detail		 Chr2:157403057 Blcap within coordinates of
Nnat within coordinates of
Tssr21283 1157 bp upstream
 SNP C/T T T T T T T T T C T T T T T T T T T T T T T C T T T T C C T T T T T T T T T T T C T T T C T C T T T T T T
rs236675224
MGI SNP Detail		 Chr2:157403192 Blcap within coordinates of
Nnat within coordinates of
Tssr21283 1022 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs265052010
MGI SNP Detail		 Chr2:157403416 Blcap within coordinates of
Cpgi12576 within coordinates of
Nnat within coordinates of
Tssr21283 798 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27338074
MGI SNP Detail		 Chr2:157403862 Blcap within coordinates of
Nnat within coordinates of
Tssr21278 within coordinates of
Tssr21283 352 bp upstream
 SNP A/G G G G G A G G G G A G G G A G
rs257301334
MGI SNP Detail		 Chr2:157403897 Blcap within coordinates of
Nnat within coordinates of
Tssr21283 317 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216983059
MGI SNP Detail		 Chr2:157403959 Blcap within coordinates of
Nnat within coordinates of
Tssr21283 255 bp upstream
 SNP A/G A A A A A A A A G A A A A A A A A A A A A A G A A A A G G A A A A G A A A A A A G A A A G A G A G A A A A
rs27338073
MGI SNP Detail		 Chr2:157403960 Blcap within coordinates of
Nnat within coordinates of
Tssr21283 254 bp upstream
 SNP A/C C C C C A C C C C A A C C A C
rs27338072
MGI SNP Detail		 Chr2:157403991 Blcap within coordinates of
Nnat within coordinates of
Tssr21283 223 bp upstream
 SNP C/T T T T T C T T T T C C T T C T
rs27338071
MGI SNP Detail		 Chr2:157404197 Blcap within coordinates of
Nnat within coordinates of
Tssr21283 17 bp upstream
 SNP A/T A A A A T A A A A T A A A T A
rs230943904
MGI SNP Detail		 Chr2:157404207 Blcap within coordinates of
Nnat within coordinates of
Tssr21282 within coordinates of
Tssr21283 7 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs257452045
MGI SNP Detail		 Chr2:157404564 Blcap within coordinates of
Rr568544 within coordinates of
Tssr21283 324 bp downstream
 SNP C/T T T T T T T T T C T T T T T T T T T T T T T C T T T T C C T T T T C T T T T T T C T T T C T C T C T T T T
rs27338070
MGI SNP Detail		 Chr2:157404569 Blcap within coordinates of
Rr568544 within coordinates of
Tssr21283 329 bp downstream
 SNP C/T T T T T C T T T T C T T C T
rs236682128
MGI SNP Detail		 Chr2:157404797 Blcap within coordinates of
Rr568544 within coordinates of
Tssr21283 557 bp downstream
 SNP C/T T T T T T T T T C T T T T T T T T T T T T T C T T T T C C T T T T T T T T T T T C T T T C T C T T T T T T
rs262708711
MGI SNP Detail		 Chr2:157404802 Blcap within coordinates of
Rr568544 within coordinates of
Tssr21283 562 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs240601907
MGI SNP Detail		 Chr2:157404932 Blcap within coordinates of
Rr568544 within coordinates of
Tssr21283 692 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252982986
MGI SNP Detail		 Chr2:157404953 Blcap within coordinates of
Rr568544 within coordinates of
Tssr21283 713 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217853727
MGI SNP Detail		 Chr2:157404988 Blcap within coordinates of
Rr568544 within coordinates of
Tssr21283 748 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236536707
MGI SNP Detail		 Chr2:157405072 Blcap within coordinates of
Rr568544 within coordinates of
Tssr21283 832 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262362699
MGI SNP Detail		 Chr2:157405136 Blcap within coordinates of
Rr568544 within coordinates of
Tssr21283 896 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231120866
MGI SNP Detail		 Chr2:157405226 Blcap within coordinates of
Rr568544 within coordinates of
Tssr21283 986 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245387764
MGI SNP Detail		 Chr2:157405309 Blcap within coordinates of
Tssr21283 1069 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265733227
MGI SNP Detail		 Chr2:157405393 Blcap within coordinates of
Tssr21283 1153 bp downstream
 SNP C/T T T T T T T T T C T T T T T T T T T T T T T C T T T T C C T T T T C T T T T T T C T T T C T C T T T T T T
rs228704704
MGI SNP Detail		 Chr2:157405432 Blcap within coordinates of
Tssr21283 1192 bp downstream
 SNP C/T C C C C C C C C T C C C C C C C C C C C C C T C C C C T T C C C C C C C C C C C T C C C T C T C C C C C C
rs248985555
MGI SNP Detail		 Chr2:157405433 Blcap within coordinates of
Tssr21283 1193 bp downstream
 SNP A/T A A A A A A A A T A A A A A A A A A A A A A T A A A A T T A A A A A A A A A A A T A A A T A T A A A A A A
rs212195239
MGI SNP Detail		 Chr2:157405447 Blcap within coordinates of
Tssr21283 1207 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs255569630
MGI SNP Detail		 Chr2:157405516 Blcap within coordinates of
Tssr21283 1276 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215227619
MGI SNP Detail		 Chr2:157405581 Blcap within coordinates of
Tssr21283 1341 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240415085
MGI SNP Detail		 Chr2:157405735 Blcap within coordinates of
Tssr21283 1495 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258363472
MGI SNP Detail		 Chr2:157405803 Blcap within coordinates of
Tssr21283 1563 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215631901
MGI SNP Detail		 Chr2:157405813 Blcap within coordinates of
Tssr21283 1573 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233949820
MGI SNP Detail		 Chr2:157405823 Blcap within coordinates of
Tssr21283 1583 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253026203
MGI SNP Detail		 Chr2:157405828 Blcap within coordinates of
Tssr21283 1588 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217739149
MGI SNP Detail		 Chr2:157405896 Blcap within coordinates of
Tssr21283 1656 bp downstream
 SNP C/T C C C C C C C C T C C C C C C C C C C C C C T C C C C T T C C C C C C C C C C C T C C C T C T C C C C C C
rs236603778
MGI SNP Detail		 Chr2:157405903 Blcap within coordinates of
Tssr21283 1663 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261932079
MGI SNP Detail		 Chr2:157405917 Blcap within coordinates of
Tssr21283 1677 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs223443208
MGI SNP Detail		 Chr2:157405949 Blcap within coordinates of
Tssr21283 1709 bp downstream
 SNP C/T T T T T T T T T C T T T T T T T T T T T T T C T T T T C C T T T T C T T T T T T C T T T C T C T C T T T T
rs247759283
MGI SNP Detail		 Chr2:157405960 Blcap within coordinates of
Tssr21283 1720 bp downstream
 SNP A/G G G G G G G G G A G G G G G G G G G G G G G A G G G G A A G G G G G G G G G G G A G G G A G A G G G G G G
rs263537906
MGI SNP Detail		 Chr2:157406039 Blcap within coordinates of
Tssr21283 1799 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222753407
MGI SNP Detail		 Chr2:157406061 Blcap within coordinates of
Tssr21283 1821 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242809969
MGI SNP Detail		 Chr2:157406124 Blcap within coordinates of
Tssr21283 1884 bp downstream
 SNP C/T T T T T T T T T C T T T T T T T T T T T T T C T T T T C C T T T T C T T T T T T C T T T C T C T C T T T T
rs256207010
MGI SNP Detail		 Chr2:157406207 Blcap within coordinates of
Tssr21283 1967 bp downstream
 SNP A/C A A A A A A A A C A A A A A A A A A A A A A C A A A A C C A A A A C A A A A A A C A A A C A C A C A A A A
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Showing SNP(s) 1 - 50 of 50
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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