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Mouse SNP Summary
Symbol
Name
ID 		Tssr21384
transcription start site region 21384
MGI:5949151

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Showing SNP(s) 1 - 37 of 37

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs220265099
MGI SNP Detail		 Chr2:160206300 Gm57434 within coordinates of
Mafb within coordinates of
Rr55988 within coordinates of
Tssr21384 1874 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239451073
MGI SNP Detail		 Chr2:160206315 Gm57434 within coordinates of
Mafb within coordinates of
Rr55988 within coordinates of
Tssr21384 1859 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs29502520
MGI SNP Detail		 Chr2:160206352 Gm57434 within coordinates of
Mafb within coordinates of
Rr55988 within coordinates of
Tssr21384 1822 bp upstream
 SNP C/T C C T T C
rs234234747
MGI SNP Detail		 Chr2:160206358 Gm57434 within coordinates of
Mafb within coordinates of
Rr55988 within coordinates of
Tssr21384 1816 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs254776042
MGI SNP Detail		 Chr2:160206425 Gm57434 within coordinates of
Mafb within coordinates of
Rr55988 within coordinates of
Tssr21384 1749 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs264664016
MGI SNP Detail		 Chr2:160206585 Gm57434 within coordinates of
Mafb within coordinates of
Rr180 within coordinates of
Rr55988 within coordinates of
Tssr21384 1589 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs32975145
MGI SNP Detail		 Chr2:160207386 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Mafb within coordinates of
Rr180 within coordinates of
Rr55988 within coordinates of
Tssr21384 788 bp upstream
 SNP C/T C C T T T C
rs244238316
MGI SNP Detail		 Chr2:160207405 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Mafb within coordinates of
Rr180 within coordinates of
Rr55988 within coordinates of
Tssr21384 769 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs213555442
MGI SNP Detail		 Chr2:160207475 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Mafb within coordinates of
Rr180 within coordinates of
Rr55988 within coordinates of
Tssr21384 699 bp upstream
 SNP G/T T T T T G G T T G T T T G G T T T T G T T T T G G T T T G T G T G T T T G G G G T G G G T T G T T T T T
rs232638314
MGI SNP Detail		 Chr2:160207991 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Mafb within coordinates of
Rr55988 within coordinates of
Tssr21384 183 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs246289924
MGI SNP Detail		 Chr2:160208127 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Mafb within coordinates of
Rr55988 within coordinates of
Tssr21384 47 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T G T T T T T T G T T T T T T G T T T T
rs216423342
MGI SNP Detail		 Chr2:160208492 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Mafb within coordinates of
Rr55988 within coordinates of
Tssr21384 288 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G T G G G G G G T G G G G G G T G G G G
rs241764121
MGI SNP Detail		 Chr2:160208552 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Mafb within coordinates of
Rr55988 within coordinates of
Tssr21384 348 bp downstream
 SNP C/T C C T C C T T C T T T C C C C C C C C T C C C C T T C C C C C C T T C C C C C C C C T T C T C T T C C
rs585962471
MGI SNP Detail		 Chr2:160208603 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Mafb within coordinates of
Rr55988 within coordinates of
Tssr21384 399 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs260654555
MGI SNP Detail		 Chr2:160208699 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Mafb within coordinates of
Rr55988 within coordinates of
Tssr21384 495 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G A G G G G G G G G G G G G
rs580147932
MGI SNP Detail		 Chr2:160208899 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Mafb within coordinates of
Rr55988 within coordinates of
Tssr21384 695 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs219656662
MGI SNP Detail		 Chr2:160209001 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Rr55988 within coordinates of
Tssr21384 797 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
rs231077080
MGI SNP Detail		 Chr2:160209040 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Rr55988 within coordinates of
Tssr21384 836 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G A G G G G G G G G G G G
rs250074750
MGI SNP Detail		 Chr2:160209233 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Gm74788 within coordinates of
Rr55988 within coordinates of
Tssr21384 1029 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A
rs220310275
MGI SNP Detail		 Chr2:160209239 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Gm74788 within coordinates of
Rr55988 within coordinates of
Tssr21384 1035 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs239512284
MGI SNP Detail		 Chr2:160209376 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Gm74788 within coordinates of
Rr55988 within coordinates of
Tssr21384 1172 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs265772849
MGI SNP Detail		 Chr2:160209470 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Gm74788 within coordinates of
Rr55988 within coordinates of
Tssr21384 1266 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs225978839
MGI SNP Detail		 Chr2:160209497 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Gm74788 within coordinates of
Rr55988 within coordinates of
Tssr21384 1293 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G C G G G G G C G G G G G G G G G G G G G C G G G G
rs251551794
MGI SNP Detail		 Chr2:160209568 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Gm74788 within coordinates of
Rr55988 within coordinates of
Tssr21384 1364 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs261587408
MGI SNP Detail		 Chr2:160209583 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Gm74788 within coordinates of
Rr55988 within coordinates of
Tssr21384 1379 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229294879
MGI SNP Detail		 Chr2:160209630 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Gm74788 within coordinates of
Rr55988 within coordinates of
Tssr21384 1426 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244301075
MGI SNP Detail		 Chr2:160209668 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Gm74788 within coordinates of
Rr55988 within coordinates of
Tssr21384 1464 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257509730
MGI SNP Detail		 Chr2:160209714 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Gm74788 within coordinates of
Rr55988 within coordinates of
Tssr21384 1510 bp downstream
 SNP A/C C A A C A A A A A A A A A A A A C A A A A A A C A A A A A A A A A A C C
rs29565520
MGI SNP Detail		 Chr2:160209716 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Gm74788 within coordinates of
Rr55988 within coordinates of
Tssr21384 1512 bp downstream
 SNP A/C C A A
rs246350310
MGI SNP Detail		 Chr2:160209760 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Gm74788 within coordinates of
Rr55988 within coordinates of
Tssr21384 1556 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs216984551
MGI SNP Detail		 Chr2:160209813 Cpgi12607 within coordinates of
Gm57434 within coordinates of
Gm74788 within coordinates of
Rr55988 within coordinates of
Tssr21384 1609 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs239283081
MGI SNP Detail		 Chr2:160210042 Cpgi12607 within coordinates of
Gm74788 within coordinates of
Rr55988 within coordinates of
Tssr21384 1838 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T C C T T T T C T T T T C T T T T T T C T T T T T T C T T T T
rs259880389
MGI SNP Detail		 Chr2:160210047 Cpgi12607 within coordinates of
Gm74788 within coordinates of
Rr55988 within coordinates of
Tssr21384 1843 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T C T T T T T T C T T T T
rs211774366
MGI SNP Detail		 Chr2:160210079 Cpgi12607 within coordinates of
Gm74788 within coordinates of
Rr55988 within coordinates of
Tssr21384 1875 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C G G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs50534665
MGI SNP Detail		 Chr2:160210109 Cpgi12607 within coordinates of
Gm74788 within coordinates of
Rr55988 within coordinates of
Tssr21384 1905 bp downstream
 SNP C/T T T C
rs249337812
MGI SNP Detail		 Chr2:160210118 Cpgi12607 within coordinates of
Gm74788 within coordinates of
Rr55988 within coordinates of
Tssr21384 1914 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A G G A A A A G A A A A A G A A A A A A G A A A A A A G A A A A
rs214775139
MGI SNP Detail		 Chr2:160210189 Cpgi12607 within coordinates of
Gm74788 within coordinates of
Rr55988 within coordinates of
Tssr21384 1985 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
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Showing SNP(s) 1 - 37 of 37
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory