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Mouse SNP Summary
Symbol
Name
ID
Tssr23347
transcription start site region 23347
MGI:5951114

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Showing SNP(s) 1 - 75 of 75

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257828829
MGI SNP Detail
Chr2:29981664 Tssr23347 1990 bp downstream
Zdhhc12 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229524894
MGI SNP Detail
Chr2:29981816 Tssr23347 1838 bp downstream
Zdhhc12 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249266493
MGI SNP Detail
Chr2:29981915 Tssr23347 1739 bp downstream
Zdhhc12 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219376843
MGI SNP Detail
Chr2:29981939 Tssr23347 1715 bp downstream
Zdhhc12 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs246083449
MGI SNP Detail
Chr2:29981952 Tssr23347 1702 bp downstream
Zdhhc12 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs215239236
MGI SNP Detail
Chr2:29981971 Tssr23347 1683 bp downstream
Zdhhc12 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232844773
MGI SNP Detail
Chr2:29982022 Tssr23347 1632 bp downstream
Zdhhc12 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250422030
MGI SNP Detail
Chr2:29982035 Tssr23347 1619 bp downstream
Zdhhc12 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213622322
MGI SNP Detail
Chr2:29982056 Tssr23347 1598 bp downstream
Zdhhc12 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237174366
MGI SNP Detail
Chr2:29982085 Tssr23347 1569 bp downstream
Zdhhc12 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255372780
MGI SNP Detail
Chr2:29982088 Tssr23347 1566 bp downstream
Zdhhc12 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226919161
MGI SNP Detail
Chr2:29982113 Tssr23347 1541 bp downstream
Zdhhc12 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27179943
MGI SNP Detail
Chr2:29982157 Tssr23347 1497 bp downstream
Zdhhc12 within coordinates of
SNP C/T T T T T T T C T T T C T T C T
rs253332717
MGI SNP Detail
Chr2:29982163 Tssr23347 1491 bp downstream
Zdhhc12 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C T C C C C
rs220688786
MGI SNP Detail
Chr2:29982210 Tssr23347 1444 bp downstream
Zdhhc12 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240105524
MGI SNP Detail
Chr2:29982237 Tssr23347 1417 bp downstream
Zdhhc12 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265158170
MGI SNP Detail
Chr2:29982257 Tssr23347 1397 bp downstream
Zdhhc12 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229293719
MGI SNP Detail
Chr2:29982349 Tssr23347 1305 bp downstream
Zdhhc12 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A
rs244412456
MGI SNP Detail
Chr2:29982365 Tssr23347 1289 bp downstream
Zdhhc12 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C T T C C C C C C T C C C T C C C T C C T T
rs264551078
MGI SNP Detail
Chr2:29982381 Tssr23347 1273 bp downstream
Zdhhc12 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C
rs228683200
MGI SNP Detail
Chr2:29982489 Tssr23347 1165 bp downstream
Zdhhc12 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246110959
MGI SNP Detail
Chr2:29982534 Tssr23347 1120 bp downstream
Zdhhc12 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215271005
MGI SNP Detail
Chr2:29982592 Tssr23347 1062 bp downstream
Zdhhc12 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G
rs226108797
MGI SNP Detail
Chr2:29982619 Tssr23347 1035 bp downstream
Zdhhc12 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A G A A A A A A G A A A A A A G A A A A
rs581796236
MGI SNP Detail
Chr2:29982621 Tssr23347 1033 bp downstream
Zdhhc12 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A G G G G G G A G G G G G G G G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243896475
MGI SNP Detail
Chr2:29982663 Tssr23347 991 bp downstream
Zdhhc12 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C G C C C C
rs214226440
MGI SNP Detail
Chr2:29982768 Tssr23347 886 bp downstream
Zdhhc12 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27179942
MGI SNP Detail
Chr2:29982827 Tssr23347 827 bp downstream
Zdhhc12 within coordinates of
SNP A/T A A A A A A A A A A T A A T A
rs27179941
MGI SNP Detail
Chr2:29982898 Tssr23347 756 bp downstream
Zdhhc12 within coordinates of
SNP C/T C C C C C C T C C C C C C C C
rs27179940
MGI SNP Detail
Chr2:29982919 Tssr23347 735 bp downstream
Zdhhc12 within coordinates of
SNP A/G G G G G G G G G G G A G G A G
rs235361902
MGI SNP Detail
Chr2:29983010 Tssr23347 644 bp downstream
Zdhhc12 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G G A A A A A A G A A A G A A A G A A A G
rs253368203
MGI SNP Detail
Chr2:29983016 Tssr23347 638 bp downstream
Zdhhc12 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs220727596
MGI SNP Detail
Chr2:29983087 Tssr23347 567 bp downstream
Zdhhc12 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs27179939
MGI SNP Detail
Chr2:29983096 Tssr23347 558 bp downstream
Zdhhc12 within coordinates of
SNP C/T T T T T T T C T T T C T T C C
rs27179938
MGI SNP Detail
Chr2:29983155 Tssr23347 499 bp downstream
Zdhhc12 within coordinates of
SNP A/C C C C C C C C C C C A C C A C
rs221600616
MGI SNP Detail
Chr2:29983217 Tssr23347 437 bp downstream
Zdhhc12 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs241633817
MGI SNP Detail
Chr2:29983372 Cpgi11425 within coordinates of
Tssr23347 282 bp downstream
Zdhhc12 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T
rs6390890
MGI SNP Detail
Chr2:29983420 Cpgi11425 within coordinates of
Tssr23347 234 bp downstream
Zdhhc12 within coordinates of
SNP C/T C T
rs27179937
MGI SNP Detail
Chr2:29983514 Cpgi11425 within coordinates of
Tssr23347 140 bp downstream
Zdhhc12 within coordinates of
SNP A/G G G G G G G G A G
rs240210152
MGI SNP Detail
Chr2:29983613 Cpgi11425 within coordinates of
Rr396857 within coordinates of
Tssr23345 within coordinates of
Tssr23347 41 bp downstream
Zdhhc12 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs257475366
MGI SNP Detail
Chr2:29983641 Cpgi11425 within coordinates of
Rr396857 within coordinates of
Tssr23346 within coordinates of
Tssr23347 13 bp downstream
Zdhhc12 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226245310
MGI SNP Detail
Chr2:29983878 Cpgi11425 within coordinates of
Tssr23347 187 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C
rs27179936
MGI SNP Detail
Chr2:29983925 Cpgi11425 within coordinates of
Tssr23347 234 bp upstream
SNP C/T C C T C C C C C C
rs27179935
MGI SNP Detail
Chr2:29984002 Cpgi11425 within coordinates of
Tssr23347 311 bp upstream
SNP G/T T T T G T G T
rs229227575
MGI SNP Detail
Chr2:29984021 Cpgi11425 within coordinates of
Tssr23347 330 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs249094440
MGI SNP Detail
Chr2:29984081 Cpgi11425 within coordinates of
Tssr23347 390 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217306815
MGI SNP Detail
Chr2:29984211 Tssr23347 520 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs235392676
MGI SNP Detail
Chr2:29984290 Tssr23347 599 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs27179934
MGI SNP Detail
Chr2:29984318 Tssr23347 627 bp upstream
SNP C/G G G C G G C G C
rs27179933
MGI SNP Detail
Chr2:29984374 Tssr23347 683 bp upstream
SNP A/T A A A T A T A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232499073
MGI SNP Detail
Chr2:29984380 Tssr23347 689 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27179932
MGI SNP Detail
Chr2:29984390 Tssr23347 699 bp upstream
SNP A/T T T T T A T A T
rs221020761
MGI SNP Detail
Chr2:29984405 Tssr23347 714 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs236729850
MGI SNP Detail
Chr2:29984428 Tssr23347 737 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261140383
MGI SNP Detail
Chr2:29984441 Tssr23347 750 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs585479689
MGI SNP Detail
Chr2:29984448 Tssr23347 757 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222277950
MGI SNP Detail
Chr2:29984500 Tssr23347 809 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs240349120
MGI SNP Detail
Chr2:29984502 Tssr23347 811 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs257519034
MGI SNP Detail
Chr2:29984581 Tssr23347 890 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs220208072
MGI SNP Detail
Chr2:29984582 Tssr23347 891 bp upstream
SNP A/C/G C C C C C C C C C C C C C C C C C C C A C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs243312254
MGI SNP Detail
Chr2:29984583 Tssr23347 892 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs264884380
MGI SNP Detail
Chr2:29984641 Tssr23347 950 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs227678972
MGI SNP Detail
Chr2:29984727 Tssr23347 1036 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs252543711
MGI SNP Detail
Chr2:29984818 Tssr23347 1127 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs261289542
MGI SNP Detail
Chr2:29984835 Tssr23347 1144 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs228527578
MGI SNP Detail
Chr2:29984851 Tssr23347 1160 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247171284
MGI SNP Detail
Chr2:29984908 Tssr23347 1217 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs215041850
MGI SNP Detail
Chr2:29984930 Tssr23347 1239 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs238849501
MGI SNP Detail
Chr2:29985003 Tssr23347 1312 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs250443268
MGI SNP Detail
Chr2:29985042 Tssr23347 1351 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs212856704
MGI SNP Detail
Chr2:29985064 Tssr23347 1373 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234366340
MGI SNP Detail
Chr2:29985068 Tssr23347 1377 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264027494
MGI SNP Detail
Chr2:29985098 Tssr23347 1407 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs222319470
MGI SNP Detail
Chr2:29985596 Tssr23347 1905 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs233884783
MGI SNP Detail
Chr2:29985684 Tssr23347 1993 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
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Showing SNP(s) 1 - 75 of 75

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory

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