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Mouse SNP Summary
Symbol
Name
ID 		Tssr25138
transcription start site region 25138
MGI:5952905

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Showing SNP(s) 1 - 70 of 70

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs240125637
MGI SNP Detail		 Chr2:90723829 Rr560592 within coordinates of
Tssr25138 1856 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs259478886
MGI SNP Detail		 Chr2:90723874 Rr560592 within coordinates of
Tssr25138 1811 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs228157785
MGI SNP Detail		 Chr2:90723888 Rr560592 within coordinates of
Tssr25138 1797 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs248087379
MGI SNP Detail		 Chr2:90723908 Rr560592 within coordinates of
Tssr25138 1777 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs264511749
MGI SNP Detail		 Chr2:90723943 Rr560592 within coordinates of
Tssr25138 1742 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs228387559
MGI SNP Detail		 Chr2:90724030 Rr560592 within coordinates of
Tssr25138 1655 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs249054462
MGI SNP Detail		 Chr2:90724061 Rr560592 within coordinates of
Tssr25138 1624 bp downstream
 SNP A/C/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs213061170
MGI SNP Detail		 Chr2:90724167 Rr560592 within coordinates of
Tssr25138 1518 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs231292185
MGI SNP Detail		 Chr2:90724256 Rr560592 within coordinates of
Tssr25138 1429 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs244572137
MGI SNP Detail		 Chr2:90724272 Rr560592 within coordinates of
Tssr25138 1413 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs215156842
MGI SNP Detail		 Chr2:90724285 Rr560592 within coordinates of
Tssr25138 1400 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs233330703
MGI SNP Detail		 Chr2:90724290 Rr560592 within coordinates of
Tssr25138 1395 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs579296432
MGI SNP Detail		 Chr2:90724351 Rr560592 within coordinates of
Tssr25138 1334 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs582646660
MGI SNP Detail		 Chr2:90724362 Rr560592 within coordinates of
Tssr25138 1323 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263600219
MGI SNP Detail		 Chr2:90724373 Rr560592 within coordinates of
Tssr25138 1312 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs584132818
MGI SNP Detail		 Chr2:90724409 Rr560592 within coordinates of
Tssr25138 1276 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs578454791
MGI SNP Detail		 Chr2:90724410 Rr560592 within coordinates of
Tssr25138 1275 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs582204916
MGI SNP Detail		 Chr2:90724411 Rr560592 within coordinates of
Tssr25138 1274 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs585728022
MGI SNP Detail		 Chr2:90724412 Rr560592 within coordinates of
Tssr25138 1273 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs226454749
MGI SNP Detail		 Chr2:90724524 Rr560592 within coordinates of
Tssr25138 1161 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs235951388
MGI SNP Detail		 Chr2:90724700 Rr560592 within coordinates of
Tssr25138 985 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs256025896
MGI SNP Detail		 Chr2:90724728 Rr560592 within coordinates of
Tssr25138 957 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46722113
MGI SNP Detail		 Chr2:90724805 Rr560592 within coordinates of
Tssr25138 880 bp downstream
 SNP A/G G A A A A
rs239984711
MGI SNP Detail		 Chr2:90724885 Rr560592 within coordinates of
Tssr25138 800 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs253262054
MGI SNP Detail		 Chr2:90724913 Rr560592 within coordinates of
Tssr25138 772 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27368622
MGI SNP Detail		 Chr2:90725242 Ndufs3 within coordinates of
Tssr25138 443 bp downstream
 SNP C/G G G G G G G G G G C G G C G
rs266150404
MGI SNP Detail		 Chr2:90725252 Ndufs3 within coordinates of
Tssr25138 433 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227916551
MGI SNP Detail		 Chr2:90725261 Ndufs3 within coordinates of
Tssr25138 424 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33530283
MGI SNP Detail		 Chr2:90725262 Ndufs3 within coordinates of
Tssr25138 423 bp downstream
 SNP C/T T C T C C C
rs27368621
MGI SNP Detail		 Chr2:90725341 Ndufs3 within coordinates of
Tssr25138 344 bp downstream
 SNP G/T G G T G G G T G G T T T T T T T
rs225198123
MGI SNP Detail		 Chr2:90725373 Ndufs3 within coordinates of
Tssr25138 312 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27368620
MGI SNP Detail		 Chr2:90725413 Ndufs3 within coordinates of
Tssr25138 272 bp downstream
 SNP C/T T T C T T T T T T T C T C T T C C
rs27368619
MGI SNP Detail		 Chr2:90725450 Ndufs3 within coordinates of
Tssr25138 235 bp downstream
 SNP A/G G G G A G A G
rs227511851
MGI SNP Detail		 Chr2:90725456 Ndufs3 within coordinates of
Tssr25138 229 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253644513
MGI SNP Detail		 Chr2:90725486 Ndufs3 within coordinates of
Tssr25138 199 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs218727456
MGI SNP Detail		 Chr2:90725645 Ndufs3 within coordinates of
Tssr25138 40 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234309578
MGI SNP Detail		 Chr2:90725655 Ndufs3 within coordinates of
Tssr25138 30 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs261400337
MGI SNP Detail		 Chr2:90725660 Ndufs3 within coordinates of
Tssr25138 25 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs213434281
MGI SNP Detail		 Chr2:90725761 Ndufs3 within coordinates of
Tssr25138 73 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs233205301
MGI SNP Detail		 Chr2:90725785 Ndufs3 within coordinates of
Tssr25138 97 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs253089011
MGI SNP Detail		 Chr2:90725848 Ndufs3 within coordinates of
Tssr25138 160 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs222238939
MGI SNP Detail		 Chr2:90725919 Ndufs3 within coordinates of
Tssr25138 231 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs250591771
MGI SNP Detail		 Chr2:90726068 Ndufs3 within coordinates of
Tssr25138 380 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs261161085
MGI SNP Detail		 Chr2:90726079 Ndufs3 within coordinates of
Tssr25138 391 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220249868
MGI SNP Detail		 Chr2:90726120 Ndufs3 within coordinates of
Tssr25138 432 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242261279
MGI SNP Detail		 Chr2:90726152 Ndufs3 within coordinates of
Tssr25138 464 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs255650277
MGI SNP Detail		 Chr2:90726168 Ndufs3 within coordinates of
Tssr25138 480 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs226212032
MGI SNP Detail		 Chr2:90726227 Ndufs3 within coordinates of
Tssr25138 539 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238272565
MGI SNP Detail		 Chr2:90726322 Ndufs3 within coordinates of
Tssr25138 634 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257053365
MGI SNP Detail		 Chr2:90726346 Ndufs3 within coordinates of
Tssr25138 658 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs232238455
MGI SNP Detail		 Chr2:90726408 Ndufs3 within coordinates of
Tssr25138 720 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs259218322
MGI SNP Detail		 Chr2:90726494 Ndufs3 within coordinates of
Tssr25138 806 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs219102953
MGI SNP Detail		 Chr2:90726569 Ndufs3 within coordinates of
Tssr25138 881 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs227739123
MGI SNP Detail		 Chr2:90726647 Ndufs3 within coordinates of
Tssr25138 959 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs27368618
MGI SNP Detail		 Chr2:90726704 Ndufs3 within coordinates of
Tssr25138 1016 bp upstream
 SNP A/T A A A A A A A T A A T A
rs213476342
MGI SNP Detail		 Chr2:90726819 Ndufs3 within coordinates of
Tssr25138 1131 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs232497623
MGI SNP Detail		 Chr2:90726877 Ndufs3 within coordinates of
Tssr25138 1189 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs253156106
MGI SNP Detail		 Chr2:90726895 Ndufs3 within coordinates of
Tssr25138 1207 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216205929
MGI SNP Detail		 Chr2:90726941 Ndufs3 within coordinates of
Tssr25138 1253 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs239737137
MGI SNP Detail		 Chr2:90726975 Ndufs3 within coordinates of
Tssr25138 1287 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs264432051
MGI SNP Detail		 Chr2:90727050 Ndufs3 within coordinates of
Tssr25138 1362 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs582484072
MGI SNP Detail		 Chr2:90727078 Ndufs3 within coordinates of
Tssr25138 1390 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs220846004
MGI SNP Detail		 Chr2:90727101 Ndufs3 within coordinates of
Tssr25138 1413 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs237370684
MGI SNP Detail		 Chr2:90727267 Ndufs3 within coordinates of
Tssr25138 1579 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249754674
MGI SNP Detail		 Chr2:90727306 Ndufs3 within coordinates of
Tssr25138 1618 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs220212407
MGI SNP Detail		 Chr2:90727410 Ndufs3 within coordinates of
Tssr25138 1722 bp upstream
 SNP C/G/T G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G G T G G G G
rs239430085
MGI SNP Detail		 Chr2:90727496 Ndufs3 within coordinates of
Tssr25138 1808 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs258257777
MGI SNP Detail		 Chr2:90727588 Ndufs3 within coordinates of
Tssr25138 1900 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs49162849
MGI SNP Detail		 Chr2:90727611 Ndufs3 within coordinates of
Tssr25138 1923 bp upstream
 SNP A/G A G G G G
rs51082048
MGI SNP Detail		 Chr2:90727612 Ndufs3 within coordinates of
Tssr25138 1924 bp upstream
 SNP A/G A G G G G
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Showing SNP(s) 1 - 70 of 70
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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