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Mouse SNP Summary
Symbol
Name
ID 		Tssr25161
transcription start site region 25161
MGI:5952928

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Showing SNP(s) 1 - 69 of 69

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF
MOLF/EiJ
MRL/MpJ
MSM
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PERA
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213201974
MGI SNP Detail		 Chr2:91011225 Madd within coordinates of
Tssr25161 1988 bp downstream
 SNP A/G A G
rs218164918
MGI SNP Detail		 Chr2:91011249 Madd within coordinates of
Tssr25161 1964 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs27387024
MGI SNP Detail		 Chr2:91011275 Madd within coordinates of
Tssr25161 1938 bp downstream
 SNP A/G A G G G A G G G G G G
rs48760926
MGI SNP Detail		 Chr2:91011311 Madd within coordinates of
Tssr25161 1902 bp downstream
 SNP C C C C
rs213056746
MGI SNP Detail		 Chr2:91011345 Madd within coordinates of
Tssr25161 1868 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs230632722
MGI SNP Detail		 Chr2:91011354 Madd within coordinates of
Tssr25161 1859 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs585334837
MGI SNP Detail		 Chr2:91011396 Madd within coordinates of
Tssr25161 1817 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs256958266
MGI SNP Detail		 Chr2:91011530 Madd within coordinates of
Tssr25161 1683 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs578360000
MGI SNP Detail		 Chr2:91011559 Madd within coordinates of
Tssr25161 1654 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs27387023
MGI SNP Detail		 Chr2:91011640 Madd within coordinates of
Tssr25161 1573 bp downstream
 SNP C/T C C T T C C T C T T C T
rs237870278
MGI SNP Detail		 Chr2:91011772 Madd within coordinates of
Tssr25161 1441 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs263320873
MGI SNP Detail		 Chr2:91011774 Madd within coordinates of
Tssr25161 1439 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T C T T T T T T C T T T T T T T C T T T T
rs222368717
MGI SNP Detail		 Chr2:91011784 Madd within coordinates of
Tssr25161 1429 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs582017604
MGI SNP Detail		 Chr2:91011821 Madd within coordinates of
Tssr25161 1392 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs584320807
MGI SNP Detail		 Chr2:91011828 Madd within coordinates of
Tssr25161 1385 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs578725688
MGI SNP Detail		 Chr2:91011835 Madd within coordinates of
Tssr25161 1378 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs582457306
MGI SNP Detail		 Chr2:91011892 Madd within coordinates of
Tssr25161 1321 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs16822038
MGI SNP Detail		 Chr2:91012060 Madd within coordinates of
Tssr25161 1153 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G A
rs16822039
MGI SNP Detail		 Chr2:91012073 Madd within coordinates of
Tssr25161 1140 bp downstream
 SNP C/T C T T C C T T C C C C C T C C T C T C C C T T C C C C T C T
rs16822040
MGI SNP Detail		 Chr2:91012097 Madd within coordinates of
Tssr25161 1116 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G C
rs16822041
MGI SNP Detail		 Chr2:91012110 Madd within coordinates of
Tssr25161 1103 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T
rs16822042
MGI SNP Detail		 Chr2:91012122 Madd within coordinates of
Tssr25161 1091 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G
rs16822043
MGI SNP Detail		 Chr2:91012147 Madd within coordinates of
Tssr25161 1066 bp downstream
 SNP C/T C C C C C C C C C C C C C C T C T C C C C C
rs16822044
MGI SNP Detail		 Chr2:91012166 Madd within coordinates of
Tssr25161 1047 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G
rs16822045
MGI SNP Detail		 Chr2:91012275 Madd within coordinates of
Tssr25161 938 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF
MOLF/EiJ
MRL/MpJ
MSM
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PERA
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs16822046
MGI SNP Detail		 Chr2:91012371 Madd within coordinates of
Tssr25161 842 bp downstream
 SNP C/T T T T T T T T T T C T T T T T T T T T T T T
rs16822047
MGI SNP Detail		 Chr2:91012426 Madd within coordinates of
Tssr25161 787 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T
rs16822048
MGI SNP Detail		 Chr2:91012456 Madd within coordinates of
Tssr25161 757 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T
rs16822049
MGI SNP Detail		 Chr2:91012476 Cpgi11898 within coordinates of
Madd within coordinates of
Tssr25161 737 bp downstream
 SNP A/T A T T A A T T A A A A T A A T A A A T A A T A
rs256455951
MGI SNP Detail		 Chr2:91012638 Cpgi11898 within coordinates of
Gm74571 within coordinates of
Madd within coordinates of
Tssr25161 575 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs214648538
MGI SNP Detail		 Chr2:91012654 Cpgi11898 within coordinates of
Gm74571 within coordinates of
Madd within coordinates of
Tssr25161 559 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227093381
MGI SNP Detail		 Chr2:91012677 Cpgi11898 within coordinates of
Gm74571 within coordinates of
Madd within coordinates of
Tssr25161 536 bp downstream
 SNP C/T T C
rs586141934
MGI SNP Detail		 Chr2:91012773 Cpgi11898 within coordinates of
Gm74571 within coordinates of
Madd within coordinates of
Tssr25161 440 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259478037
MGI SNP Detail		 Chr2:91012959 Cpgi11898 within coordinates of
Madd within coordinates of
Tssr25161 254 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216656088
MGI SNP Detail		 Chr2:91013064 Cpgi11898 within coordinates of
Madd within coordinates of
Tssr25161 149 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs236105031
MGI SNP Detail		 Chr2:91013158 Cpgi11898 within coordinates of
Madd within coordinates of
Tssr25161 55 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs29958693
MGI SNP Detail		 Chr2:91013177 Cpgi11898 within coordinates of
Madd within coordinates of
Tssr25161 36 bp downstream
 SNP C/T C T T C T
rs218545055
MGI SNP Detail		 Chr2:91013296 Cpgi11898 within coordinates of
Madd within coordinates of
Tssr25161 18 bp upstream
Tssr25162 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs235983010
MGI SNP Detail		 Chr2:91013393 Cpgi11898 within coordinates of
Madd within coordinates of
Tssr25161 115 bp upstream
Tssr25163 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs262309744
MGI SNP Detail		 Chr2:91013490 Cpgi11898 within coordinates of
Rr397125 within coordinates of
Tssr25161 212 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs16822050
MGI SNP Detail		 Chr2:91013584 Cpgi11898 within coordinates of
Rr397125 within coordinates of
Tssr25161 306 bp upstream
 SNP A/C C C C C C C C C C C C C C A C A C C C C C
rs16822051
MGI SNP Detail		 Chr2:91013594 Cpgi11898 within coordinates of
Rr397125 within coordinates of
Tssr25161 316 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T
rs259475176
MGI SNP Detail		 Chr2:91013679 Cpgi11898 within coordinates of
Rr397125 within coordinates of
Tssr25161 401 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs16822052
MGI SNP Detail		 Chr2:91013736 Cpgi11898 within coordinates of
Rr397125 within coordinates of
Tssr25161 458 bp upstream
 SNP A/G G G G G G G G G G G G G G A G A G G G G G
rs16822053
MGI SNP Detail		 Chr2:91013830 Tssr25161 552 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A G
rs254705465
MGI SNP Detail		 Chr2:91013919 Tssr25161 641 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A
rs580447751
MGI SNP Detail		 Chr2:91014027 Tssr25161 749 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs230264846
MGI SNP Detail		 Chr2:91014126 Tssr25161 848 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs16822054
MGI SNP Detail		 Chr2:91014189 Tssr25161 911 bp upstream
Tssr25165 within coordinates of
 SNP A/G A A A A A A A A A A A A A A G A G A A A A
rs16822055
MGI SNP Detail		 Chr2:91014237 Rr367225 within coordinates of
Tssr25161 959 bp upstream
Tssr25165 within coordinates of
 SNP A/G G G G G G G A G G A G G A G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/HeJ
A/J
AKR/J
B10.D2-Hc<0> H2<d> H2-T18<c>/oSnJ
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF
MOLF/EiJ
MRL/MpJ
MSM
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/Lac
NZW/LacJ
PERA
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs16822056
MGI SNP Detail		 Chr2:91014493 Nr1h3 within coordinates of
Rr367225 within coordinates of
Tssr25161 1215 bp upstream
 SNP A/G A A A A A A A A A A A A A G A G A A A A A
rs16822057
MGI SNP Detail		 Chr2:91014514 Nr1h3 within coordinates of
Rr367225 within coordinates of
Tssr25161 1236 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C T
rs216521944
MGI SNP Detail		 Chr2:91014561 Nr1h3 within coordinates of
Tssr25161 1283 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236364941
MGI SNP Detail		 Chr2:91014583 Nr1h3 within coordinates of
Tssr25161 1305 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs16822058
MGI SNP Detail		 Chr2:91014600 Nr1h3 within coordinates of
Tssr25161 1322 bp upstream
 SNP C/T C C C C C C C C C C C C C C T C T C C C C C
rs16822059
MGI SNP Detail		 Chr2:91014673 Nr1h3 within coordinates of
Tssr25161 1395 bp upstream
 SNP C/G/T C C T C T T C C C G T T C C
rs16822060
MGI SNP Detail		 Chr2:91014717 Nr1h3 within coordinates of
Tssr25161 1439 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A
rs16822061
MGI SNP Detail		 Chr2:91014762 Nr1h3 within coordinates of
Tssr25161 1484 bp upstream
 SNP A/G A A A A A A G A A A A A G A A A A A A A A A
rs16822062
MGI SNP Detail		 Chr2:91014780 Nr1h3 within coordinates of
Tssr25161 1502 bp upstream
 SNP A/C A A A A A A A A A C A A A A C A C A A A A C
rs16822063
MGI SNP Detail		 Chr2:91014810 Nr1h3 within coordinates of
Tssr25161 1532 bp upstream
 SNP A/C/T T T T T T T T T T A T T T T A T A T T T T C
rs16822064
MGI SNP Detail		 Chr2:91014836 Nr1h3 within coordinates of
Tssr25161 1558 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A
rs16822065
MGI SNP Detail		 Chr2:91014890 Nr1h3 within coordinates of
Tssr25161 1612 bp upstream
 SNP A/G G G G G G G G G G G G G G G A G A G G G G A
rs258890412
MGI SNP Detail		 Chr2:91015056 Nr1h3 within coordinates of
Tssr25161 1778 bp upstream
 SNP A/G A G
rs222943741
MGI SNP Detail		 Chr2:91015172 Nr1h3 within coordinates of
Tssr25161 1894 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs16822072
MGI SNP Detail		 Chr2:91015210 Nr1h3 within coordinates of
Tssr25161 1932 bp upstream
 SNP A/T A A T T A T T T T A T T A T T T A T T A T
rs16822073
MGI SNP Detail		 Chr2:91015218 Nr1h3 within coordinates of
Tssr25161 1940 bp upstream
 SNP A/G G G G G G G G G G A G G G G G G G G G G G G
rs222678642
MGI SNP Detail		 Chr2:91015249 Nr1h3 within coordinates of
Tssr25161 1971 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs586446518
MGI SNP Detail		 Chr2:91015261 Nr1h3 within coordinates of
Tssr25161 1983 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs246947941
MGI SNP Detail		 Chr2:91015274 Nr1h3 within coordinates of
Tssr25161 1996 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory