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Mouse SNP Summary
Symbol
Name
ID 		Tssr25214
transcription start site region 25214
MGI:5952981

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Showing SNP(s) 1 - 47 of 47

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/Sv
129X1/SvJ
A
A/J
AKR
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cBy
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/He
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs256352261
MGI SNP Detail		 Chr2:91759839 Gm75422 within coordinates of
Tssr25214 1957 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs214245909
MGI SNP Detail		 Chr2:91759864 Gm75422 within coordinates of
Tssr25214 1932 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs237083188
MGI SNP Detail		 Chr2:91759877 Gm75422 within coordinates of
Tssr25214 1919 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262420615
MGI SNP Detail		 Chr2:91759917 Gm75422 within coordinates of
Tssr25214 1879 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G A A
rs224211891
MGI SNP Detail		 Chr2:91760045 Gm75422 within coordinates of
Tssr25214 1751 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs234635736
MGI SNP Detail		 Chr2:91760084 Gm75422 within coordinates of
Tssr25214 1712 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs248270395
MGI SNP Detail		 Chr2:91760102 Gm75422 within coordinates of
Tssr25214 1694 bp downstream
 SNP C/T T C
rs223260679
MGI SNP Detail		 Chr2:91760110 Gm75422 within coordinates of
Tssr25214 1686 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs236918348
MGI SNP Detail		 Chr2:91760113 Gm75422 within coordinates of
Tssr25214 1683 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs261831991
MGI SNP Detail		 Chr2:91760212 Gm75422 within coordinates of
Mdk within coordinates of
Tssr25214 1584 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221648949
MGI SNP Detail		 Chr2:91760242 Gm75422 within coordinates of
Mdk within coordinates of
Tssr25212 within coordinates of
Tssr25214 1554 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243758845
MGI SNP Detail		 Chr2:91760273 Gm75422 within coordinates of
Mdk within coordinates of
Tssr25214 1523 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs265597694
MGI SNP Detail		 Chr2:91760354 Gm75422 within coordinates of
Mdk within coordinates of
Tssr25214 1442 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G A G G G G G G A G G G G G G G G G G G G
rs227939209
MGI SNP Detail		 Chr2:91760509 Gm75422 within coordinates of
Mdk within coordinates of
Tssr25214 1287 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs246944740
MGI SNP Detail		 Chr2:91760519 Gm75422 within coordinates of
Mdk within coordinates of
Tssr25214 1277 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs260196539
MGI SNP Detail		 Chr2:91760532 Gm75422 within coordinates of
Mdk within coordinates of
Tssr25214 1264 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T A T T T T T T A T T T T T T T A T T T T
rs223729581
MGI SNP Detail		 Chr2:91760593 Gm75422 within coordinates of
Mdk within coordinates of
Tssr25214 1203 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G A G G G G G G A G G G G G G G G G G G G
rs29965420
MGI SNP Detail		 Chr2:91760621 Gm75422 within coordinates of
Mdk within coordinates of
Tssr25214 1175 bp downstream
 SNP A/G A A A A G A G
rs586362893
MGI SNP Detail		 Chr2:91760656 Gm75422 within coordinates of
Mdk within coordinates of
Tssr25214 1140 bp downstream
 SNP C/G G G C G G G G G G G G G G G G G G G G G G G G G G G C
rs214047206
MGI SNP Detail		 Chr2:91760814 Gm75422 within coordinates of
Mdk within coordinates of
Tssr25214 982 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C C C C C C
rs27368515
MGI SNP Detail		 Chr2:91761004 Gm75422 within coordinates of
Mdk within coordinates of
Tssr25214 792 bp downstream
 SNP A/G G G A G A G G G A A A G A A A A A
rs252374259
MGI SNP Detail		 Chr2:91761075 Gm75422 within coordinates of
Mdk within coordinates of
Tssr25214 721 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215146546
MGI SNP Detail		 Chr2:91761311 Gm75422 within coordinates of
Mdk within coordinates of
Tssr25214 485 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs234800309
MGI SNP Detail		 Chr2:91761369 Gm75422 within coordinates of
Mdk within coordinates of
Tssr25214 427 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A A A C A A A A A A C A A A A
rs254380047
MGI SNP Detail		 Chr2:91761556 Cpgi11916 within coordinates of
Gm75422 within coordinates of
Mdk within coordinates of
Tssr25214 240 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/Sv
129X1/SvJ
A
A/J
AKR
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cBy
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/He
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs223316915
MGI SNP Detail		 Chr2:91761708 Cpgi11916 within coordinates of
Gm75422 within coordinates of
Mdk within coordinates of
Tssr25214 88 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T C T T T T
rs234564832
MGI SNP Detail		 Chr2:91761746 Cpgi11916 within coordinates of
Gm75422 within coordinates of
Mdk within coordinates of
Tssr25214 50 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A A A A A A
rs261342202
MGI SNP Detail		 Chr2:91761796 Cpgi11916 within coordinates of
Gm75422 within coordinates of
Mdk within coordinates of
Tssr25214 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222374335
MGI SNP Detail		 Chr2:91761931 Cpgi11916 within coordinates of
Gm39876 within coordinates of
Gm75422 within coordinates of
Mdk within coordinates of
Tssr25214 52 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs27368514
MGI SNP Detail		 Chr2:91762045 Cpgi11916 within coordinates of
Gm39876 within coordinates of
Gm75422 within coordinates of
Mdk within coordinates of
Tssr25214 166 bp upstream
Tssr25217 within coordinates of
 SNP A/G A A A A A G G G
rs263036056
MGI SNP Detail		 Chr2:91762206 Cpgi11916 within coordinates of
Gm39876 within coordinates of
Gm75422 within coordinates of
Mdk within coordinates of
Tssr25214 327 bp upstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs221684628
MGI SNP Detail		 Chr2:91762264 Cpgi11916 within coordinates of
D2Mit1007 within coordinates of
Gm39876 within coordinates of
Gm75422 within coordinates of
Mdk within coordinates of
Tssr25214 385 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs241128111
MGI SNP Detail		 Chr2:91762296 Cpgi11916 within coordinates of
D2Mit1007 within coordinates of
Gm39876 within coordinates of
Gm75422 within coordinates of
Mdk within coordinates of
Tssr25214 417 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs260256945
MGI SNP Detail		 Chr2:91762304 Cpgi11916 within coordinates of
D2Mit1007 within coordinates of
Gm39876 within coordinates of
Gm75422 within coordinates of
Mdk within coordinates of
Tssr25214 425 bp upstream
Tssr25220 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs3090413
MGI SNP Detail		 Chr2:91762349 Cpgi11916 within coordinates of
D2Mit1008 within coordinates of
Gm39876 within coordinates of
Gm75422 within coordinates of
Tssr25214 470 bp upstream
Tssr25221 within coordinates of
 SNP C/G C C C C C C G C
rs250186848
MGI SNP Detail		 Chr2:91762409 Cpgi11916 within coordinates of
D2Mit1008 within coordinates of
Gm39876 within coordinates of
Gm75422 within coordinates of
Tssr25214 530 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs265113923
MGI SNP Detail		 Chr2:91762475 Cpgi11916 within coordinates of
D2Mit1008 within coordinates of
Gm39876 within coordinates of
Gm75422 within coordinates of
Tssr25214 596 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs231110379
MGI SNP Detail		 Chr2:91762631 Gm39876 within coordinates of
Gm75422 within coordinates of
Tssr25214 752 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs257337371
MGI SNP Detail		 Chr2:91762669 Gm39876 within coordinates of
Gm75422 within coordinates of
Tssr25214 790 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs215935436
MGI SNP Detail		 Chr2:91762756 Gm39876 within coordinates of
Gm75422 within coordinates of
Tssr25214 877 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs247945409
MGI SNP Detail		 Chr2:91762977 Gm39876 within coordinates of
Gm75422 within coordinates of
Tssr25214 1098 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs217406257
MGI SNP Detail		 Chr2:91763006 Gm39876 within coordinates of
Gm75422 within coordinates of
Tssr25214 1127 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs236050768
MGI SNP Detail		 Chr2:91763046 Gm39876 within coordinates of
Gm75422 within coordinates of
Tssr25214 1167 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs256185223
MGI SNP Detail		 Chr2:91763532 Dgkz within coordinates of
Gm39876 within coordinates of
Gm75422 within coordinates of
Tssr25214 1653 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs213927600
MGI SNP Detail		 Chr2:91763543 Dgkz within coordinates of
Gm39876 within coordinates of
Gm75422 within coordinates of
Tssr25214 1664 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs236819543
MGI SNP Detail		 Chr2:91763823 Dgkz within coordinates of
Gm39876 within coordinates of
Gm75422 within coordinates of
Tssr25214 1944 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G T G G G G
rs251030337
MGI SNP Detail		 Chr2:91763850 Dgkz within coordinates of
Gm39876 within coordinates of
Gm75422 within coordinates of
Tssr25214 1971 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
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Showing SNP(s) 1 - 47 of 47
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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