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Mouse SNP Summary
Symbol
Name
ID
Tssr25955
transcription start site region 25955
MGI:5953722

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Showing SNP(s) 1 - 65 of 65

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263542625
MGI SNP Detail
Chr2:121979565 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 1826 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27425704
MGI SNP Detail
Chr2:121979583 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 1808 bp downstream
SNP C/T C C T C T C T T C C C C C T C
rs248631671
MGI SNP Detail
Chr2:121979613 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 1778 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216564468
MGI SNP Detail
Chr2:121979655 B2m within coordinates of
Patl2 within coordinates of
Tssr19807 within coordinates of
Tssr25955 1736 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29813515
MGI SNP Detail
Chr2:121979736 B2m within coordinates of
Patl2 within coordinates of
Tssr19808 within coordinates of
Tssr25955 1655 bp downstream
SNP A/T T T A T A T
rs243295188
MGI SNP Detail
Chr2:121979751 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 1640 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs214798221
MGI SNP Detail
Chr2:121979876 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 1515 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235858868
MGI SNP Detail
Chr2:121979998 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 1393 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs387564088
MGI SNP Detail
Chr2:121980145 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 1246 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A
rs212672676
MGI SNP Detail
Chr2:121980182 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 1209 bp downstream
SNP C/T C T
rs262225120
MGI SNP Detail
Chr2:121980234 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 1157 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs217193160
MGI SNP Detail
Chr2:121980315 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 1076 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233181484
MGI SNP Detail
Chr2:121980474 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 917 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs50151522
MGI SNP Detail
Chr2:121980529 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 862 bp downstream
SNP A/G A G G A G
rs222168473
MGI SNP Detail
Chr2:121980551 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 840 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236905648
MGI SNP Detail
Chr2:121980596 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 795 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs255626708
MGI SNP Detail
Chr2:121980597 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 794 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223246216
MGI SNP Detail
Chr2:121980603 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 788 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243183107
MGI SNP Detail
Chr2:121980633 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 758 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs265710642
MGI SNP Detail
Chr2:121980657 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 734 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs227355156
MGI SNP Detail
Chr2:121980666 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 725 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242734788
MGI SNP Detail
Chr2:121980667 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 724 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260560245
MGI SNP Detail
Chr2:121980719 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 672 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27425703
MGI SNP Detail
Chr2:121980781 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 610 bp downstream
SNP C/T C C C C C C T T C C T T T C C T C C
rs27425702
MGI SNP Detail
Chr2:121980864 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 527 bp downstream
SNP A/G G A G A G A G A G G G G G G G A G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214468777
MGI SNP Detail
Chr2:121980879 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 512 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229814272
MGI SNP Detail
Chr2:121981016 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 375 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27425701
MGI SNP Detail
Chr2:121981031 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 360 bp downstream
SNP A/C A C A C A C C C C A C C A C A
rs214877434
MGI SNP Detail
Chr2:121981045 B2m within coordinates of
Patl2 within coordinates of
Tssr19810 within coordinates of
Tssr25955 346 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs233215359
MGI SNP Detail
Chr2:121981112 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 279 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs253503738
MGI SNP Detail
Chr2:121981328 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 63 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216931391
MGI SNP Detail
Chr2:121981356 B2m within coordinates of
Patl2 within coordinates of
Tssr19811 within coordinates of
Tssr25955 35 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs230937796
MGI SNP Detail
Chr2:121981357 B2m within coordinates of
Patl2 within coordinates of
Tssr19811 within coordinates of
Tssr25955 34 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs27425700
MGI SNP Detail
Chr2:121981448 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 45 bp upstream
SNP A/C C C C C C C A C C C C C C C C
rs223589753
MGI SNP Detail
Chr2:121981476 B2m within coordinates of
Patl2 within coordinates of
Tssr19816 within coordinates of
Tssr25955 73 bp upstream
Tssr25956 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246158680
MGI SNP Detail
Chr2:121981480 B2m within coordinates of
Patl2 within coordinates of
Tssr19816 within coordinates of
Tssr25955 77 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs259590631
MGI SNP Detail
Chr2:121981506 B2m within coordinates of
Patl2 within coordinates of
Tssr19817 within coordinates of
Tssr25955 103 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs221069981
MGI SNP Detail
Chr2:121981575 B2m within coordinates of
Patl2 within coordinates of
Tssr19819 within coordinates of
Tssr25955 172 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs242770828
MGI SNP Detail
Chr2:121981576 B2m within coordinates of
Patl2 within coordinates of
Tssr19819 within coordinates of
Tssr25955 173 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs260588408
MGI SNP Detail
Chr2:121981595 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 192 bp upstream
Tssr25957 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs13467835
MGI SNP Detail
Chr2:121981600 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 197 bp upstream
Tssr25957 within coordinates of
SNP A/C A A A A A A A C A A C C C A A C A A
rs240959835
MGI SNP Detail
Chr2:121981609 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 206 bp upstream
Tssr25957 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs265249340
MGI SNP Detail
Chr2:121981611 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 208 bp upstream
Tssr25957 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229660257
MGI SNP Detail
Chr2:121981618 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 215 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs257936237
MGI SNP Detail
Chr2:121981625 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 222 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs256896813
MGI SNP Detail
Chr2:121981626 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 223 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27425699
MGI SNP Detail
Chr2:121981668 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 265 bp upstream
SNP C/T C C C C C C T C C C C C C C C
rs247804919
MGI SNP Detail
Chr2:121982208 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 805 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216967018
MGI SNP Detail
Chr2:121982230 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 827 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs579991631
MGI SNP Detail
Chr2:121982477 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 1074 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237479421
MGI SNP Detail
Chr2:121982524 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 1121 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs249406097
MGI SNP Detail
Chr2:121982541 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 1138 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215494335
MGI SNP Detail
Chr2:121982594 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 1191 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27425698
MGI SNP Detail
Chr2:121982739 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 1336 bp upstream
SNP A/G A A G A G A G G G G A G G A A G A
rs27425697
MGI SNP Detail
Chr2:121982779 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 1376 bp upstream
SNP A/G G G A G A G A G G A G G G G G G G A G
rs27425696
MGI SNP Detail
Chr2:121982872 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 1469 bp upstream
SNP A/G A A G A G A G G G G A G G A A G A
rs236431702
MGI SNP Detail
Chr2:121982886 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 1483 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs254385603
MGI SNP Detail
Chr2:121982910 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 1507 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218877395
MGI SNP Detail
Chr2:121982953 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 1550 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48130350
MGI SNP Detail
Chr2:121983124 B2m within coordinates of
Patl2 within coordinates of
Tssr19821 within coordinates of
Tssr25955 1721 bp upstream
SNP C/T T C C
rs13467843
MGI SNP Detail
Chr2:121983199 B2m within coordinates of
Patl2 within coordinates of
Tssr19821 within coordinates of
Tssr25955 1796 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs221938401
MGI SNP Detail
Chr2:121983204 B2m within coordinates of
Patl2 within coordinates of
Tssr19821 within coordinates of
Tssr25955 1801 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246112905
MGI SNP Detail
Chr2:121983228 B2m within coordinates of
Patl2 within coordinates of
Tssr19821 within coordinates of
Tssr25955 1825 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs13467836
MGI SNP Detail
Chr2:121983252 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 1849 bp upstream
SNP A/G G G A G A G
rs584056560
MGI SNP Detail
Chr2:121983333 B2m within coordinates of
Patl2 within coordinates of
Tssr25955 1930 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
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Showing SNP(s) 1 - 65 of 65

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory