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Mouse SNP Summary
Symbol
Name
ID
Tssr26287
transcription start site region 26287
MGI:5954054

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Showing SNP(s) 1 - 57 of 57

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217640512
MGI SNP Detail
Chr2:130119411 Nop56 within coordinates of
Tssr26287 1884 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27275801
MGI SNP Detail
Chr2:130119525 Nop56 within coordinates of
Tssr26287 1770 bp downstream
SNP A/G A A A A A A G A A A G A A A A
rs583647189
MGI SNP Detail
Chr2:130119583 Nop56 within coordinates of
Tssr26287 1712 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs586044057
MGI SNP Detail
Chr2:130119597 Nop56 within coordinates of
Tssr26287 1698 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs27275800
MGI SNP Detail
Chr2:130119845 Nop56 within coordinates of
Tssr26287 1450 bp downstream
SNP A/G G G G G G G A G G G A G G G G
rs27275799
MGI SNP Detail
Chr2:130119912 Nop56 within coordinates of
Tssr26287 1383 bp downstream
SNP A/G G G G G G G A G G G A G G G
rs27275798
MGI SNP Detail
Chr2:130120049 Nop56 within coordinates of
Tssr26287 1246 bp downstream
SNP G/T G G G T G G G G G G G G T
rs27275797
MGI SNP Detail
Chr2:130120100 Nop56 within coordinates of
Tssr26287 1195 bp downstream
SNP A/G A A A A A G A A G A A A A A A
rs27275796
MGI SNP Detail
Chr2:130120123 Nop56 within coordinates of
Tssr26287 1172 bp downstream
SNP A/G G G G A G G G G G G G G G A
rs27275795
MGI SNP Detail
Chr2:130120204 Nop56 within coordinates of
Tssr26287 1091 bp downstream
SNP A/G G G G G G G G G G G G G G A G
rs27275794
MGI SNP Detail
Chr2:130120572 Nop56 within coordinates of
Tssr26287 723 bp downstream
SNP A/T A A A T A T A T A T A A T
rs226170866
MGI SNP Detail
Chr2:130120573 Nop56 within coordinates of
Tssr26287 722 bp downstream
SNP A/T A A A A A A A A A A T T A A A A A A A A T A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs27275793
MGI SNP Detail
Chr2:130120707 Nop56 within coordinates of
Tssr26287 588 bp downstream
SNP A/G A A A A A G A A G A A A A A A
rs27275792
MGI SNP Detail
Chr2:130120796 Nop56 within coordinates of
Tssr26287 499 bp downstream
SNP C/T C C C C C C C C C C C C T C
rs27275791
MGI SNP Detail
Chr2:130120797 Nop56 within coordinates of
Tssr26287 498 bp downstream
SNP A/G G G G G G A G G A G G G G G G
rs580003952
MGI SNP Detail
Chr2:130120879 Nop56 within coordinates of
Tssr26287 416 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs583418927
MGI SNP Detail
Chr2:130121146 Nop56 within coordinates of
Tssr26287 149 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs587009011
MGI SNP Detail
Chr2:130121239 Idh3b within coordinates of
Tssr26287 56 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G G G G G G G G G G G G G G G G G G
rs238611799
MGI SNP Detail
Chr2:130121397 Idh3b within coordinates of
Tssr26287 54 bp upstream
Tssr26288 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C T C C C C C C C C C C C C C C C C C C C
rs258158686
MGI SNP Detail
Chr2:130121398 Idh3b within coordinates of
Tssr26287 55 bp upstream
Tssr26288 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27275790
MGI SNP Detail
Chr2:130121399 Idh3b within coordinates of
Tssr26287 56 bp upstream
Tssr26288 within coordinates of
SNP C/G C C C G C C C C C C C C C G C
rs13469604
MGI SNP Detail
Chr2:130121413 Idh3b within coordinates of
Tssr26287 70 bp upstream
SNP A/C A A A A A A C C A A C A A A A A A A C C A C C A C A C A A A A A C A A A A A C C A A A A C A A C A A A A
rs263802842
MGI SNP Detail
Chr2:130121415 Idh3b within coordinates of
Tssr26287 72 bp upstream
SNP A/G G G G G G G A A G G G G G G G G G G G G G G A A G G G G G G G G G G G G G G G A A G G G G A G G G G G G G
rs27275789
MGI SNP Detail
Chr2:130121445 Idh3b within coordinates of
Tssr26287 102 bp upstream
SNP A/G G G G A G G A G G G A G G A G
rs254947627
MGI SNP Detail
Chr2:130121518 Idh3b within coordinates of
Tssr26287 175 bp upstream
SNP A/G A A A A A A G G A A A A A A A A A A A A A A G G A A A A A A A A A A A A A A A G G A A A A G A A A A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs587584632
MGI SNP Detail
Chr2:130121710 Idh3b within coordinates of
Tssr26287 367 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C T C C C C C C C C C C C C C C C C C C
rs581635490
MGI SNP Detail
Chr2:130121748 Idh3b within coordinates of
Tssr26287 405 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G G G G G G G G G G G G G G G G G
rs27275788
MGI SNP Detail
Chr2:130121816 Idh3b within coordinates of
Tssr26287 473 bp upstream
SNP C/T T T T T T T T T T C T
rs254128143
MGI SNP Detail
Chr2:130121862 Idh3b within coordinates of
Tssr26287 519 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27275787
MGI SNP Detail
Chr2:130121897 Idh3b within coordinates of
Tssr26287 554 bp upstream
SNP A/G A A A A G A G A A A A A
rs243985382
MGI SNP Detail
Chr2:130121910 Idh3b within coordinates of
Tssr26287 567 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs214619804
MGI SNP Detail
Chr2:130121922 Idh3b within coordinates of
Tssr26287 579 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232877171
MGI SNP Detail
Chr2:130121923 Idh3b within coordinates of
Tssr26287 580 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T T C T T T T T T T T T T T T T T T T T T T
rs258358591
MGI SNP Detail
Chr2:130122000 Idh3b within coordinates of
Tssr26287 657 bp upstream
SNP G/T T T T T T T G G T T T T T T T T T T T G T T G G T T T G T T T T T G T T T T T G G T T T T G T T G T T T T
rs217925983
MGI SNP Detail
Chr2:130122001 Idh3b within coordinates of
Tssr26287 658 bp upstream
SNP C/T T T T T T T C C T T T T T T T T T T T C T T C C T T T C T T T T T C T T T T T C C T T T T C T T C T T T T
rs242989674
MGI SNP Detail
Chr2:130122156 Idh3b within coordinates of
Tssr26287 813 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255502707
MGI SNP Detail
Chr2:130122174 Idh3b within coordinates of
Tssr26287 831 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218744820
MGI SNP Detail
Chr2:130122258 Idh3b within coordinates of
Tssr26287 915 bp upstream
SNP A/G G G G G G G G G G G A G G G G G G G G A G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs231631233
MGI SNP Detail
Chr2:130122276 Idh3b within coordinates of
Tssr26287 933 bp upstream
SNP C/T C C C C C C T T C C C C C C C C C C C C C C T T C C C C C C C C C C C C C C C T C C C C C T C C C C C C C
rs251736131
MGI SNP Detail
Chr2:130122321 Idh3b within coordinates of
Tssr26287 978 bp upstream
SNP C/T C C C C C C T T C C C C C C C C C C C C C C T T C C C C C C C C C C C C C C C T T C C C C T C C C C C C
rs220830197
MGI SNP Detail
Chr2:130122349 Idh3b within coordinates of
Tssr26287 1006 bp upstream
SNP C/G G G G G G G C C G G G G G G G G G G G G G G C C G G G G G G G G G G G G G G C C G G G G C G C G G G G
rs245915027
MGI SNP Detail
Chr2:130122367 Idh3b within coordinates of
Tssr26287 1024 bp upstream
SNP C/T T T T T T T C C T T T T T T T T T T T T T T C C T T T T T T T T T T T T T T C C T T T T C T T T T T T
rs27275786
MGI SNP Detail
Chr2:130122403 Idh3b within coordinates of
Tssr26287 1060 bp upstream
SNP C/T C C C C C T C C T C C C
rs579082225
MGI SNP Detail
Chr2:130122515 Idh3b within coordinates of
Tssr26287 1172 bp upstream
SNP C/T C C C C C C T T C C C C C C C C C C C T C C T T C C C T C C C C C T C C C C C T T C C C C T C C C C C C
rs27275785
MGI SNP Detail
Chr2:130122587 Idh3b within coordinates of
Tssr26287 1244 bp upstream
SNP C/T T T T T C C T C T T T
rs251841034
MGI SNP Detail
Chr2:130122756 Idh3b within coordinates of
Tssr26287 1413 bp upstream
SNP C/T T T T T T T C C T T T T T T T T T T T C T T C C T T T C T T T T T C T T T T T C C T T T T C T T C T T T T
rs254270866
MGI SNP Detail
Chr2:130122757 Idh3b within coordinates of
Tssr26287 1414 bp upstream
SNP A/G G G G G G G A A G G G G G G G G G G G G G G A A G G G G G G G G G G G G G G G A A G G G G A G G G G G G G
rs224696324
MGI SNP Detail
Chr2:130122827 Idh3b within coordinates of
Tssr26287 1484 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27275784
MGI SNP Detail
Chr2:130122853 Idh3b within coordinates of
Tssr26287 1510 bp upstream
SNP A/G G G G G G A G G A G G G
rs256465845
MGI SNP Detail
Chr2:130122939 Idh3b within coordinates of
Tssr26287 1596 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27275783
MGI SNP Detail
Chr2:130122963 Idh3b within coordinates of
Tssr26287 1620 bp upstream
SNP A/T T T T T A T T A T T T
rs27275782
MGI SNP Detail
Chr2:130122990 Idh3b within coordinates of
Tssr26287 1647 bp upstream
SNP A/G G G G G G A G G A G G G
rs218176700
MGI SNP Detail
Chr2:130123096 Idh3b within coordinates of
Tssr26287 1753 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27275781
MGI SNP Detail
Chr2:130123229 Idh3b within coordinates of
Tssr26287 1886 bp upstream
SNP A/T T T T T T A T T A T T T
rs252528604
MGI SNP Detail
Chr2:130123250 Idh3b within coordinates of
Tssr26287 1907 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212850377
MGI SNP Detail
Chr2:130123269 Idh3b within coordinates of
Tssr26287 1926 bp upstream
SNP C/T T T T T T T C C T T T T T T T T T T T C T T C C T T T C T T T T T C T T T T T C C T T T T C T T C T T T T
rs231507373
MGI SNP Detail
Chr2:130123274 Idh3b within coordinates of
Tssr26287 1931 bp upstream
SNP C/T T T T T T T C C T T T T T T T T T T T C T T C C T T T C T T T T T C T T T T T C C T T T T C T T T T T T T
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Showing SNP(s) 1 - 57 of 57

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory