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Mouse SNP Summary
Symbol
Name
ID
Tssr26295
transcription start site region 26295
MGI:5954062

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Showing SNP(s) 1 - 57 of 57

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214737976
MGI SNP Detail
Chr2:130264484 Pced1a within coordinates of
Tssr26295 1678 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs233206897
MGI SNP Detail
Chr2:130264610 Pced1a within coordinates of
Tssr26295 1552 bp downstream
SNP A/G A A A A A A G G A A A A A A A A A A A G A A A G A A A A A A A A A A A A A A G A A A A A G A A A A A A A
rs252150076
MGI SNP Detail
Chr2:130264641 Pced1a within coordinates of
Tssr26295 1521 bp downstream
SNP A/C C C C C C C A A C C C C C C C C A C C C A C C C C C C C C C C C C C A A C C C C A C C C C C C C
rs27260632
MGI SNP Detail
Chr2:130264900 Pced1a within coordinates of
Tssr26295 1262 bp downstream
SNP A/G G G G G G G G G G G G G G A
rs243254442
MGI SNP Detail
Chr2:130264954 Pced1a within coordinates of
Tssr26295 1208 bp downstream
SNP A/T T T T T T T A A T T T T T T T T T T T A T T T A T T T T T T T T T T T T T T T A T T T T T A T T T T T T T
rs255708927
MGI SNP Detail
Chr2:130265183 Pced1a within coordinates of
Tssr26295 979 bp downstream
SNP C/T C C C C C C T T C C C C C C C C C C C T C C C T C C C T C T C C C T T C C C C T T T C C T T C C T C C T C
rs221163250
MGI SNP Detail
Chr2:130265274 Pced1a within coordinates of
Tssr26295 888 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243271944
MGI SNP Detail
Chr2:130265977 Cpgi12264 within coordinates of
Pced1a within coordinates of
Tssr26295 185 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27260631
MGI SNP Detail
Chr2:130265983 Cpgi12264 within coordinates of
Pced1a within coordinates of
Tssr26295 179 bp downstream
SNP A/G A A A G A A A G A A G
rs220972399
MGI SNP Detail
Chr2:130266014 Cpgi12264 within coordinates of
Pced1a within coordinates of
Tssr26295 148 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241248622
MGI SNP Detail
Chr2:130266029 Cpgi12264 within coordinates of
Pced1a within coordinates of
Tssr26295 133 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T A T T A T T T T T T T T
rs27260630
MGI SNP Detail
Chr2:130266041 Cpgi12264 within coordinates of
Pced1a within coordinates of
Tssr26295 121 bp downstream
SNP C/T C T C C C C T C T C C C C C
rs229155146
MGI SNP Detail
Chr2:130266066 Cpgi12264 within coordinates of
Pced1a within coordinates of
Tssr26295 96 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C
rs27260629
MGI SNP Detail
Chr2:130266094 Cpgi12264 within coordinates of
Pced1a within coordinates of
Tssr26295 68 bp downstream
SNP A/G G G G A G G A G G G G G G G
rs27260628
MGI SNP Detail
Chr2:130266196 Cpgi12264 within coordinates of
Pced1a within coordinates of
Tssr26295 within coordinates of
SNP A/T T T T T T A T T T A T A
rs27260627
MGI SNP Detail
Chr2:130266203 Cpgi12264 within coordinates of
Pced1a within coordinates of
Tssr26295 within coordinates of
SNP G/T G G G G T G G T G
rs27260626
MGI SNP Detail
Chr2:130266308 Cpgi12264 within coordinates of
Pced1a within coordinates of
Tssr20210 within coordinates of
Tssr26295 95 bp upstream
Vps16 within coordinates of
SNP A/T A A A A A A A A A A A A T
rs251145566
MGI SNP Detail
Chr2:130266319 Cpgi12264 within coordinates of
Pced1a within coordinates of
Tssr26295 106 bp upstream
Vps16 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A
rs256860881
MGI SNP Detail
Chr2:130266329 Cpgi12264 within coordinates of
Pced1a within coordinates of
Tssr26295 116 bp upstream
Vps16 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs227143588
MGI SNP Detail
Chr2:130266366 Cpgi12264 within coordinates of
Pced1a within coordinates of
Tssr26295 153 bp upstream
Vps16 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A C A A A A
rs246354252
MGI SNP Detail
Chr2:130266380 Cpgi12264 within coordinates of
Pced1a within coordinates of
Tssr26295 167 bp upstream
Vps16 within coordinates of
SNP A/C A A A A A A C C A A A A A A A A A A A C A A A C A A A C A A A A A C A A A A A C C A A A A C A A C A A A A
rs216920032
MGI SNP Detail
Chr2:130266389 Cpgi12264 within coordinates of
Pced1a within coordinates of
Tssr26295 176 bp upstream
Vps16 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240633415
MGI SNP Detail
Chr2:130266517 Cpgi12264 within coordinates of
Pced1a within coordinates of
Tssr26295 304 bp upstream
Vps16 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs252926664
MGI SNP Detail
Chr2:130266600 Cpgi12264 within coordinates of
Pced1a within coordinates of
Tssr26295 387 bp upstream
Tssr26297 within coordinates of
Vps16 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27260625
MGI SNP Detail
Chr2:130266628 Cpgi12264 within coordinates of
Pced1a within coordinates of
Tssr26295 415 bp upstream
Tssr26297 within coordinates of
Vps16 within coordinates of
SNP C/T C C T C C C C C T C C T C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs238330138
MGI SNP Detail
Chr2:130266722 Cpgi12264 within coordinates of
Tssr26295 509 bp upstream
Vps16 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs252087062
MGI SNP Detail
Chr2:130266772 Cpgi12264 within coordinates of
Tssr26295 559 bp upstream
Vps16 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221117728
MGI SNP Detail
Chr2:130266777 Cpgi12264 within coordinates of
Tssr26295 564 bp upstream
Vps16 within coordinates of
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs582673142
MGI SNP Detail
Chr2:130266788 Cpgi12264 within coordinates of
Tssr26295 575 bp upstream
Vps16 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs585711308
MGI SNP Detail
Chr2:130266789 Cpgi12264 within coordinates of
Tssr26295 576 bp upstream
Vps16 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs234747502
MGI SNP Detail
Chr2:130266822 Cpgi12264 within coordinates of
Tssr26295 609 bp upstream
Vps16 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs254412117
MGI SNP Detail
Chr2:130266861 Tssr26295 648 bp upstream
Vps16 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs226975704
MGI SNP Detail
Chr2:130266975 Tssr26295 762 bp upstream
Vps16 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240968989
MGI SNP Detail
Chr2:130266995 Tssr26295 782 bp upstream
Vps16 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs264834089
MGI SNP Detail
Chr2:130267014 Tssr26295 801 bp upstream
Vps16 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222299325
MGI SNP Detail
Chr2:130267094 Tssr26295 881 bp upstream
Vps16 within coordinates of
SNP C/T C C C C C C T T C C C C C C C C C C C T C C C T C C C T C C C C C C C C C C C T T C C C C T C C C C C C C
rs246622473
MGI SNP Detail
Chr2:130267125 Tssr26295 912 bp upstream
Vps16 within coordinates of
SNP A/G G G G G G G A A G G G G G G G G G G G A G G G A G G G A G G G G G G G G G G G A A G G G G A G G G G G G G
rs256853334
MGI SNP Detail
Chr2:130267151 Tssr26295 938 bp upstream
Vps16 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227315650
MGI SNP Detail
Chr2:130267177 Tssr26295 964 bp upstream
Vps16 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A G A A G A A A A A A G A
rs246298361
MGI SNP Detail
Chr2:130267208 Tssr26295 995 bp upstream
Vps16 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27260624
MGI SNP Detail
Chr2:130267251 Tssr26295 1038 bp upstream
Vps16 within coordinates of
SNP A/G A A A A A A A A A A G A A A
rs259467924
MGI SNP Detail
Chr2:130267292 Tssr26295 1079 bp upstream
Vps16 within coordinates of
SNP A/C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C T C C C C
rs249339243
MGI SNP Detail
Chr2:130267428 Tssr26295 1215 bp upstream
Vps16 within coordinates of
SNP C/G C C C C C C G G C C C C C C C C C C C G C C C G C C C G C C C C G C C C C C G G C C C C G C C G C C C C
rs213598906
MGI SNP Detail
Chr2:130267441 Tssr26295 1228 bp upstream
Vps16 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G A G G A G G G G G G A G
rs236361425
MGI SNP Detail
Chr2:130267547 Tssr26295 1334 bp upstream
Vps16 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs580098435
MGI SNP Detail
Chr2:130267573 Tssr26295 1360 bp upstream
Vps16 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs245924532
MGI SNP Detail
Chr2:130267638 Tssr26295 1425 bp upstream
Vps16 within coordinates of
SNP A/G G G G G G G A A G G G G G G G G G G G A G G A A G G G A G G G G A A G G G G A A A G G A A G G G G A G
rs582357778
MGI SNP Detail
Chr2:130267706 Tssr26295 1493 bp upstream
Vps16 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C
rs215234872
MGI SNP Detail
Chr2:130267709 Tssr26295 1496 bp upstream
Vps16 within coordinates of
SNP A/G G G G G G G A A G G G G G G G G G G G A G G G A G G G A G G G G A G G G G A A A G G A A G G G G A G
rs234884597
MGI SNP Detail
Chr2:130267715 Tssr26295 1502 bp upstream
Vps16 within coordinates of
SNP C/T T T T T T T C C T T T T T T T T T T T C T T C C T T T C T T T T C T T T T C C C T T C C T T T T C T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs585788968
MGI SNP Detail
Chr2:130267740 Tssr26295 1527 bp upstream
Vps16 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A A C A A C A A A A A C A
rs3703264
MGI SNP Detail
Chr2:130267759 Tssr26295 1546 bp upstream
Vps16 within coordinates of
SNP A/C C C A A A A C
rs27260623
MGI SNP Detail
Chr2:130267879 Tssr26295 1666 bp upstream
Vps16 within coordinates of
SNP C/T C C C C C C C C C C T C C
rs4135935
MGI SNP Detail
Chr2:130267912 Tssr26295 1699 bp upstream
Vps16 within coordinates of
SNP C/T C T C C C T C T C C T C C C C C
rs236196856
MGI SNP Detail
Chr2:130267956 Tssr26295 1743 bp upstream
Vps16 within coordinates of
SNP A/G G G G G G G A A G G G G G G G G G G G A G G G A G G G G G G G G G G G G G G G A A G G G G A G G G G G G G
rs256100768
MGI SNP Detail
Chr2:130267980 Tssr26295 1767 bp upstream
Vps16 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs222007979
MGI SNP Detail
Chr2:130268148 Tssr26295 1935 bp upstream
Vps16 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
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Showing SNP(s) 1 - 57 of 57

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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory

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