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Mouse SNP Summary
Symbol
Name
ID 		Tssr26391
transcription start site region 26391
MGI:5954158

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs245879652
MGI SNP Detail		 Chr2:131168927 Rnf24 within coordinates of
Tssr26391 1975 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27273707
MGI SNP Detail		 Chr2:131168928 Rnf24 within coordinates of
Tssr26391 1974 bp downstream
 SNP A/G G G G G G G A A G G G G G G G
rs226061116
MGI SNP Detail		 Chr2:131168930 Rnf24 within coordinates of
Tssr26391 1972 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27273706
MGI SNP Detail		 Chr2:131169010 Rnf24 within coordinates of
Tssr26391 1892 bp downstream
 SNP A/G G G G G G G G G G G A G G A G
rs27273705
MGI SNP Detail		 Chr2:131169135 Rnf24 within coordinates of
Tssr26391 1767 bp downstream
 SNP C/T T T T T C T T C T
rs234800156
MGI SNP Detail		 Chr2:131169139 Rnf24 within coordinates of
Tssr26391 1763 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs264307297
MGI SNP Detail		 Chr2:131169163 Rnf24 within coordinates of
Tssr26391 1739 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T T T C T T C C C C C T C C C C C T T C C C C C C C T C C C C
rs49501580
MGI SNP Detail		 Chr2:131169181 Rnf24 within coordinates of
Tssr26391 1721 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C T T C T C C C C C C C C C C C C T C C C C C C C C C C C C C
rs235035320
MGI SNP Detail		 Chr2:131169182 Rnf24 within coordinates of
Tssr26391 1720 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs253152784
MGI SNP Detail		 Chr2:131169247 Rnf24 within coordinates of
Tssr26391 1655 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs220595836
MGI SNP Detail		 Chr2:131169328 Rnf24 within coordinates of
Tssr26391 1574 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27273704
MGI SNP Detail		 Chr2:131169372 Rnf24 within coordinates of
Tssr26391 1530 bp downstream
 SNP A/G A A A A A A G G A G G A A G A
rs47965252
MGI SNP Detail		 Chr2:131169456 Rnf24 within coordinates of
Tssr26391 1446 bp downstream
 SNP C/T C C T
rs220643287
MGI SNP Detail		 Chr2:131169476 Rnf24 within coordinates of
Tssr26391 1426 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs48977331
MGI SNP Detail		 Chr2:131169705 Rnf24 within coordinates of
Tssr26391 1197 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T G G G T G G T T T T T G T T T T T G G T T T T T T T T T T T T
rs27273703
MGI SNP Detail		 Chr2:131169735 Rnf24 within coordinates of
Tssr26391 1167 bp downstream
 SNP A/G A A A A A A G G A A G A A G A
rs27273702
MGI SNP Detail		 Chr2:131169805 Rnf24 within coordinates of
Tssr26391 1097 bp downstream
 SNP A/G A A A A A A A G G A A G A A G A
rs27273701
MGI SNP Detail		 Chr2:131169824 Rnf24 within coordinates of
Tssr26391 1078 bp downstream
 SNP A/G G G G G G G G A A G G G G G G G
rs257096331
MGI SNP Detail		 Chr2:131169845 Rnf24 within coordinates of
Tssr26391 1057 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs27273700
MGI SNP Detail		 Chr2:131169878 Rnf24 within coordinates of
Tssr26391 1024 bp downstream
 SNP A/T A A A A A A A T T A A A A A A A
rs255237483
MGI SNP Detail		 Chr2:131169900 Rnf24 within coordinates of
Tssr26391 1002 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs50273132
MGI SNP Detail		 Chr2:131169912 Rnf24 within coordinates of
Tssr26391 990 bp downstream
 SNP A/G A A G
rs228262654
MGI SNP Detail		 Chr2:131169930 Rnf24 within coordinates of
Tssr26391 972 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T C C T C T T T T T T T T T T T T C T T T T T T T T T T T T T
rs47980803
MGI SNP Detail		 Chr2:131169941 Rnf24 within coordinates of
Tssr26391 961 bp downstream
 SNP A/C A A C
rs48781958
MGI SNP Detail		 Chr2:131169960 Rnf24 within coordinates of
Tssr26391 942 bp downstream
 SNP C/T T T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs46889090
MGI SNP Detail		 Chr2:131169973 Rnf24 within coordinates of
Tssr26391 929 bp downstream
 SNP A/G A A G
rs27273699
MGI SNP Detail		 Chr2:131170056 Rnf24 within coordinates of
Tssr26391 846 bp downstream
 SNP C/T C C C C C C T T C C C C C C C
rs214657944
MGI SNP Detail		 Chr2:131170126 Rnf24 within coordinates of
Tssr26391 776 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs232153506
MGI SNP Detail		 Chr2:131170128 Rnf24 within coordinates of
Tssr26391 774 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261759656
MGI SNP Detail		 Chr2:131170349 Rnf24 within coordinates of
Tssr26391 553 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A G G A G A A A A A A A A A A A A G A A A A A A A A A A A A A
rs49443925
MGI SNP Detail		 Chr2:131170547 Rnf24 within coordinates of
Tssr26391 355 bp downstream
 SNP A/C A C
rs33501454
MGI SNP Detail		 Chr2:131170704 Rnf24 within coordinates of
Tssr26391 198 bp downstream
 SNP C/T C C C C T
rs29670911
MGI SNP Detail		 Chr2:131170816 Rnf24 within coordinates of
Tssr26391 86 bp downstream
 SNP C/T T T T T C
rs221789354
MGI SNP Detail		 Chr2:131170853 Rnf24 within coordinates of
Tssr26391 49 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239787107
MGI SNP Detail		 Chr2:131170875 Rnf24 within coordinates of
Tssr26391 27 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs257028242
MGI SNP Detail		 Chr2:131171050 Rnf24 within coordinates of
Tssr26391 141 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33181635
MGI SNP Detail		 Chr2:131171063 Rnf24 within coordinates of
Tssr26391 154 bp upstream
 SNP A/C A A A C
rs33626986
MGI SNP Detail		 Chr2:131171224 Rnf24 within coordinates of
Tssr26391 315 bp upstream
 SNP A/T A A A T
rs264846678
MGI SNP Detail		 Chr2:131171274 Rnf24 within coordinates of
Tssr26391 365 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs27273698
MGI SNP Detail		 Chr2:131171355 Rnf24 within coordinates of
Tssr26391 446 bp upstream
 SNP C/T T T T T T T T C C T C T T C T
rs260238762
MGI SNP Detail		 Chr2:131171410 Rnf24 within coordinates of
Tssr26391 501 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260686270
MGI SNP Detail		 Chr2:131171428 Rnf24 within coordinates of
Tssr26391 519 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs228160472
MGI SNP Detail		 Chr2:131171438 Rnf24 within coordinates of
Tssr26391 529 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27273697
MGI SNP Detail		 Chr2:131171486 Rnf24 within coordinates of
Tssr26391 577 bp upstream
 SNP A/C C C C C C C C A C C C C A
rs29722230
MGI SNP Detail		 Chr2:131171496 Rnf24 within coordinates of
Tssr26391 587 bp upstream
 SNP A/G G G A
rs29558827
MGI SNP Detail		 Chr2:131171501 Rnf24 within coordinates of
Tssr26391 592 bp upstream
 SNP C/T C C T
rs250184821
MGI SNP Detail		 Chr2:131171530 Rnf24 within coordinates of
Tssr26391 621 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs212660293
MGI SNP Detail		 Chr2:131171622 Rnf24 within coordinates of
Tssr26391 713 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240715919
MGI SNP Detail		 Chr2:131171645 Rnf24 within coordinates of
Tssr26391 736 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs29574463
MGI SNP Detail		 Chr2:131171687 Rnf24 within coordinates of
Tssr26391 778 bp upstream
 SNP A/G G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27273696
MGI SNP Detail		 Chr2:131171695 Rnf24 within coordinates of
Tssr26391 786 bp upstream
 SNP A/G A A A A A A G G A A G A A G A
rs233310508
MGI SNP Detail		 Chr2:131171706 Rnf24 within coordinates of
Tssr26391 797 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs33734307
MGI SNP Detail		 Chr2:131171753 Rnf24 within coordinates of
Tssr26391 844 bp upstream
 SNP A/T A A A T
rs219886679
MGI SNP Detail		 Chr2:131171802 Rnf24 within coordinates of
Tssr26391 893 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs245785736
MGI SNP Detail		 Chr2:131171818 Rnf24 within coordinates of
Tssr26391 909 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs256155091
MGI SNP Detail		 Chr2:131171881 Rnf24 within coordinates of
Tssr26391 972 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs29620387
MGI SNP Detail		 Chr2:131171945 Rnf24 within coordinates of
Tssr26391 1036 bp upstream
 SNP A/C C C C A
rs248305105
MGI SNP Detail		 Chr2:131172119 Rnf24 within coordinates of
Tssr26391 1210 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs582804024
MGI SNP Detail		 Chr2:131172147 Rnf24 within coordinates of
Tssr26391 1238 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs260637145
MGI SNP Detail		 Chr2:131172181 Rnf24 within coordinates of
Tssr26391 1272 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T
rs32888940
MGI SNP Detail		 Chr2:131172185 Rnf24 within coordinates of
Tssr26391 1276 bp upstream
 SNP C/G C C C G
rs240609881
MGI SNP Detail		 Chr2:131172310 Rnf24 within coordinates of
Tssr26391 1401 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27273695
MGI SNP Detail		 Chr2:131172329 Rnf24 within coordinates of
Tssr26391 1420 bp upstream
 SNP A/T A A A A A A A A A A A A A A T
rs27273694
MGI SNP Detail		 Chr2:131172359 Rnf24 within coordinates of
Tssr26391 1450 bp upstream
 SNP C/T T T T T T T C C T T C T T C T
rs585369400
MGI SNP Detail		 Chr2:131172412 Rnf24 within coordinates of
Rr46413 within coordinates of
Tssr26391 1503 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs254480118
MGI SNP Detail		 Chr2:131172495 Rnf24 within coordinates of
Rr46413 within coordinates of
Tssr26391 1586 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs32857520
MGI SNP Detail		 Chr2:131172504 Rnf24 within coordinates of
Rr46413 within coordinates of
Tssr26391 1595 bp upstream
 SNP C/T C C T
rs235667338
MGI SNP Detail		 Chr2:131172516 Rnf24 within coordinates of
Rr46413 within coordinates of
Tssr26391 1607 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T T T C T T C C C C C T C C C C C T T C C C C C C C T C C C C
rs247030153
MGI SNP Detail		 Chr2:131172559 Rnf24 within coordinates of
Rr46413 within coordinates of
Tssr26391 1650 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs216306781
MGI SNP Detail		 Chr2:131172568 Rnf24 within coordinates of
Rr46413 within coordinates of
Tssr26391 1659 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27273693
MGI SNP Detail		 Chr2:131172599 Rnf24 within coordinates of
Rr46413 within coordinates of
Tssr26391 1690 bp upstream
 SNP A/G G G G G G G G G G G A G G G G
rs233254667
MGI SNP Detail		 Chr2:131172608 Rnf24 within coordinates of
Rr46413 within coordinates of
Tssr26391 1699 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs47965311
MGI SNP Detail		 Chr2:131172612 Rnf24 within coordinates of
Rr46413 within coordinates of
Tssr26391 1703 bp upstream
 SNP T T
rs214825025
MGI SNP Detail		 Chr2:131172679 Rnf24 within coordinates of
Rr46413 within coordinates of
Tssr26391 1770 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27273692
MGI SNP Detail		 Chr2:131172867 Rnf24 within coordinates of
Rr46413 within coordinates of
Tssr26391 1958 bp upstream
 SNP A/T A A T T A T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27273691
MGI SNP Detail		 Chr2:131172905 Rnf24 within coordinates of
Rr46413 within coordinates of
Tssr26391 1996 bp upstream
 SNP C/G G G G G G G C C G G C G G C G
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Showing SNP(s) 1 - 76 of 76
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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