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Mouse SNP Summary
Symbol
Name
ID 		Tssr26402
transcription start site region 26402
MGI:5954169

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Showing SNP(s) 1 - 66 of 66

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs246006833
MGI SNP Detail		 Chr2:131402505 Adra1d within coordinates of
Rr55657 within coordinates of
Tssr26402 1930 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs213988192
MGI SNP Detail		 Chr2:131402506 Adra1d within coordinates of
Rr55657 within coordinates of
Tssr26402 1929 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs231089530
MGI SNP Detail		 Chr2:131402520 Adra1d within coordinates of
Rr55657 within coordinates of
Tssr26402 1915 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs249488278
MGI SNP Detail		 Chr2:131402587 Adra1d within coordinates of
Rr55657 within coordinates of
Tssr26402 1848 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A
rs211699425
MGI SNP Detail		 Chr2:131402727 Adra1d within coordinates of
Rr55657 within coordinates of
Tssr26402 1708 bp downstream
 SNP C/G/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T
rs239992311
MGI SNP Detail		 Chr2:131402818 Adra1d within coordinates of
Rr55657 within coordinates of
Tssr26402 1617 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33037725
MGI SNP Detail		 Chr2:131402865 Adra1d within coordinates of
Rr55657 within coordinates of
Tssr26402 1570 bp downstream
 SNP C/G G G G C
rs33027863
MGI SNP Detail		 Chr2:131402870 Adra1d within coordinates of
Rr55657 within coordinates of
Tssr26402 1565 bp downstream
 SNP G/T G G G T
rs232724849
MGI SNP Detail		 Chr2:131402920 Adra1d within coordinates of
Rr55657 within coordinates of
Tssr26402 1515 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C C C T C T T T T T T C T T T T T C C T T T T T T T T T T T T
rs250399224
MGI SNP Detail		 Chr2:131402985 Adra1d within coordinates of
Cpgi12295 within coordinates of
Rr55657 within coordinates of
Tssr26402 1450 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs219289456
MGI SNP Detail		 Chr2:131403105 Adra1d within coordinates of
Cpgi12295 within coordinates of
Rr55657 within coordinates of
Tssr26402 1330 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs244964185
MGI SNP Detail		 Chr2:131403150 Adra1d within coordinates of
Cpgi12295 within coordinates of
Rr55657 within coordinates of
Tssr26402 1285 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33655363
MGI SNP Detail		 Chr2:131403237 Adra1d within coordinates of
Cpgi12295 within coordinates of
Rr55657 within coordinates of
Tssr26402 1198 bp downstream
 SNP C/T C C C T
rs47950347
MGI SNP Detail		 Chr2:131403434 Adra1d within coordinates of
Cpgi12295 within coordinates of
Rr55657 within coordinates of
Tssr26402 1001 bp downstream
 SNP A/G A A G
rs33487737
MGI SNP Detail		 Chr2:131403690 Adra1d within coordinates of
Cpgi12295 within coordinates of
Rr55657 within coordinates of
Tssr26402 745 bp downstream
 SNP C/T T T C
rs6240589
MGI SNP Detail		 Chr2:131403762 Adra1d within coordinates of
Cpgi12295 within coordinates of
Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 673 bp downstream
 SNP A/C A A A A A A A A A A A A A A C A A C C C A A C A A A A C A C C A A A A A C C A A C A A C A A A A
rs6254449
MGI SNP Detail		 Chr2:131404041 Adra1d within coordinates of
Cpgi12295 within coordinates of
Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 394 bp downstream
 SNP C/T C T
rs227568178
MGI SNP Detail		 Chr2:131404278 Cpgi12295 within coordinates of
Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 157 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs245899492
MGI SNP Detail		 Chr2:131404280 Cpgi12295 within coordinates of
Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 155 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C
rs6256098
MGI SNP Detail		 Chr2:131404301 Cpgi12295 within coordinates of
Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 134 bp downstream
 SNP C/G G C
rs229160844
MGI SNP Detail		 Chr2:131404331 Cpgi12295 within coordinates of
Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 104 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs6257189
MGI SNP Detail		 Chr2:131404502 Cpgi12295 within coordinates of
Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 47 bp upstream
 SNP A/G G A
rs219820169
MGI SNP Detail		 Chr2:131404528 Cpgi12295 within coordinates of
Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 73 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs6257325
MGI SNP Detail		 Chr2:131404577 Cpgi12295 within coordinates of
Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 122 bp upstream
 SNP C/T C T
rs253652638
MGI SNP Detail		 Chr2:131404804 Cpgi12295 within coordinates of
Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 349 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A T A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs215696599
MGI SNP Detail		 Chr2:131404839 Cpgi12295 within coordinates of
Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 384 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G
rs232622603
MGI SNP Detail		 Chr2:131404895 Cpgi12295 within coordinates of
Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 440 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs250285962
MGI SNP Detail		 Chr2:131404955 Cpgi12295 within coordinates of
Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 500 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A A A G A G G G G G G A G G G G G A A G G G G G G G G G G G G
rs6271670
MGI SNP Detail		 Chr2:131404979 Cpgi12295 within coordinates of
Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 524 bp upstream
 SNP A/G G A
rs235358456
MGI SNP Detail		 Chr2:131404998 Cpgi12295 within coordinates of
Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 543 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260861193
MGI SNP Detail		 Chr2:131405020 Cpgi12295 within coordinates of
Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 565 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A A A G A G G G G G G A G G G G G A A G G G G G G G A G G G G
rs226708548
MGI SNP Detail		 Chr2:131405021 Cpgi12295 within coordinates of
Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 566 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250239348
MGI SNP Detail		 Chr2:131405135 Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 680 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs259965498
MGI SNP Detail		 Chr2:131405207 Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 752 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C C C T C T T T T T T C T T T T T C C T T T T T T T C T T T T
rs221106600
MGI SNP Detail		 Chr2:131405234 Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 779 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C C C T C T T T T T T C T T T T T C C T T T T T T T T T T T T
rs239845253
MGI SNP Detail		 Chr2:131405250 Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 795 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257722500
MGI SNP Detail		 Chr2:131405277 Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 822 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs229567051
MGI SNP Detail		 Chr2:131405297 Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 842 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs241603087
MGI SNP Detail		 Chr2:131405319 Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 864 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A A A T A T T T T T T A T T T T T A A T T T T T T T T T T T T
rs266236824
MGI SNP Detail		 Chr2:131405363 Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 908 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs233497472
MGI SNP Detail		 Chr2:131405387 Gm14285 within coordinates of
Rr55657 within coordinates of
Tssr26402 932 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs580765257
MGI SNP Detail		 Chr2:131405551 Gm14285 within coordinates of
Tssr26402 1096 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246329722
MGI SNP Detail		 Chr2:131405604 Gm14285 within coordinates of
Tssr26402 1149 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T C T T T T T T C T T T T T T T T T T T T
rs215602899
MGI SNP Detail		 Chr2:131405651 Gm14285 within coordinates of
Tssr26402 1196 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226532944
MGI SNP Detail		 Chr2:131405668 Gm14285 within coordinates of
Tssr26402 1213 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244327590
MGI SNP Detail		 Chr2:131405711 Gm14285 within coordinates of
Tssr26402 1256 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs33052668
MGI SNP Detail		 Chr2:131405760 Gm14285 within coordinates of
Tssr26402 1305 bp upstream
 SNP A/G A A A A G
rs33574065
MGI SNP Detail		 Chr2:131405770 Gm14285 within coordinates of
Tssr26402 1315 bp upstream
 SNP C/T T T T T C
rs255416715
MGI SNP Detail		 Chr2:131405827 Gm14285 within coordinates of
Tssr26402 1372 bp upstream
 SNP A/G/T A A A A A A A A A A A A A A A A A A A G A A G G G A G A A A A A A G A A A A A G G A A A A A A A T A A A A
rs218964351
MGI SNP Detail		 Chr2:131405831 Gm14285 within coordinates of
Tssr26402 1376 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33361791
MGI SNP Detail		 Chr2:131405929 Gm14285 within coordinates of
Tssr26402 1474 bp upstream
 SNP C/T T T T T C
rs33606215
MGI SNP Detail		 Chr2:131405938 Gm14285 within coordinates of
Tssr26402 1483 bp upstream
 SNP A/G G G G G A
rs221052067
MGI SNP Detail		 Chr2:131405988 Gm14285 within coordinates of
Tssr26402 1533 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs33126145
MGI SNP Detail		 Chr2:131406005 Gm14285 within coordinates of
Tssr26402 1550 bp upstream
 SNP A/G G G G A
rs251374346
MGI SNP Detail		 Chr2:131406023 Gm14285 within coordinates of
Tssr26402 1568 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29556222
MGI SNP Detail		 Chr2:131406045 Gm14285 within coordinates of
Tssr26402 1590 bp upstream
 SNP A/G G G G A
rs49285720
MGI SNP Detail		 Chr2:131406063 Gm14285 within coordinates of
Tssr26402 1608 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G G G A G G A A A A A G A A A A A G G A A A A A A A A A A A A
rs29498748
MGI SNP Detail		 Chr2:131406078 Gm14285 within coordinates of
Tssr26402 1623 bp upstream
 SNP C/T C C C T
rs234416836
MGI SNP Detail		 Chr2:131406147 Gm14285 within coordinates of
Tssr26402 1692 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240362445
MGI SNP Detail		 Chr2:131406152 Gm14285 within coordinates of
Tssr26402 1697 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs257653144
MGI SNP Detail		 Chr2:131406190 Gm14285 within coordinates of
Tssr26402 1735 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs226521619
MGI SNP Detail		 Chr2:131406201 Gm14285 within coordinates of
Tssr26402 1746 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244315716
MGI SNP Detail		 Chr2:131406295 Gm14285 within coordinates of
Tssr26402 1840 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs29628057
MGI SNP Detail		 Chr2:131406348 Gm14285 within coordinates of
Tssr26402 1893 bp upstream
 SNP A/T A A A T
rs228404033
MGI SNP Detail		 Chr2:131406375 Tssr26402 1920 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs252231097
MGI SNP Detail		 Chr2:131406391 Tssr26402 1936 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
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Showing SNP(s) 1 - 66 of 66
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory
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