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Mouse SNP Summary
Symbol
Name
ID 		Tssr26508
transcription start site region 26508
MGI:5954275

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs212801662
MGI SNP Detail		 Chr2:134484023 Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 1948 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs579791515
MGI SNP Detail		 Chr2:134484055 Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 1916 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs229688460
MGI SNP Detail		 Chr2:134484104 Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 1867 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs249140161
MGI SNP Detail		 Chr2:134484124 Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 1847 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs235067034
MGI SNP Detail		 Chr2:134484151 Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 1820 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs583307942
MGI SNP Detail		 Chr2:134484246 Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 1725 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253176121
MGI SNP Detail		 Chr2:134484353 Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 1618 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T
rs223765678
MGI SNP Detail		 Chr2:134484408 Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 1563 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs238246736
MGI SNP Detail		 Chr2:134484614 Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 1357 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs256475183
MGI SNP Detail		 Chr2:134484747 Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 1224 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs220162872
MGI SNP Detail		 Chr2:134484748 Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 1223 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G T G G G G G G T G G G G G G G T G G G G
rs241657295
MGI SNP Detail		 Chr2:134484763 Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 1208 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259823720
MGI SNP Detail		 Chr2:134484863 Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 1108 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs221962097
MGI SNP Detail		 Chr2:134484968 Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 1003 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239894173
MGI SNP Detail		 Chr2:134485054 Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 917 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265457778
MGI SNP Detail		 Chr2:134485096 Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 875 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230791654
MGI SNP Detail		 Chr2:134485143 Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 828 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs245667843
MGI SNP Detail		 Chr2:134485146 Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 825 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs261844154
MGI SNP Detail		 Chr2:134485174 Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 797 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs223902332
MGI SNP Detail		 Chr2:134485289 Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 682 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs248516719
MGI SNP Detail		 Chr2:134485392 Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 579 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs217014483
MGI SNP Detail		 Chr2:134485607 Cpgi12319 within coordinates of
Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 364 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G A G G G G G G G G G G G
rs228284809
MGI SNP Detail		 Chr2:134485845 Cpgi12319 within coordinates of
Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 126 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C
rs252712413
MGI SNP Detail		 Chr2:134485904 Cpgi12319 within coordinates of
Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 67 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215456928
MGI SNP Detail		 Chr2:134485934 Cpgi12319 within coordinates of
Rr55684 within coordinates of
Tmx4 within coordinates of
Tssr26508 37 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C T C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236481313
MGI SNP Detail		 Chr2:134486048 Cpgi12319 within coordinates of
Rr397337 within coordinates of
Rr55684 within coordinates of
Tssr26508 70 bp upstream
Tssr26510 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G C G G G G G G C G G G G
rs47363093
MGI SNP Detail		 Chr2:134486115 Cpgi12319 within coordinates of
Rr397337 within coordinates of
Rr55684 within coordinates of
Tssr26508 137 bp upstream
 SNP A/C C A
rs212291928
MGI SNP Detail		 Chr2:134486185 Cpgi12319 within coordinates of
Rr397337 within coordinates of
Rr55684 within coordinates of
Tssr26508 207 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs235254199
MGI SNP Detail		 Chr2:134486317 Rr55684 within coordinates of
Tssr26508 339 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs252712348
MGI SNP Detail		 Chr2:134486371 Rr55684 within coordinates of
Tssr26508 393 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs29869310
MGI SNP Detail		 Chr2:134486438 Rr55684 within coordinates of
Tssr26508 460 bp upstream
 SNP G/T G T T T G G
rs583764407
MGI SNP Detail		 Chr2:134486443 Rr55684 within coordinates of
Tssr26508 465 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239959573
MGI SNP Detail		 Chr2:134486483 Rr55684 within coordinates of
Tssr26508 505 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T A T T T T
rs258636454
MGI SNP Detail		 Chr2:134486510 Rr55684 within coordinates of
Tssr26508 532 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222974533
MGI SNP Detail		 Chr2:134486600 Rr55684 within coordinates of
Tssr26508 622 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243034176
MGI SNP Detail		 Chr2:134486671 Tssr26508 693 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs264800716
MGI SNP Detail		 Chr2:134486771 Tssr26508 793 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224063292
MGI SNP Detail		 Chr2:134486772 Tssr26508 794 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242560255
MGI SNP Detail		 Chr2:134486804 Tssr26508 826 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C C C C G C C C C C C C G C C C C
rs260340134
MGI SNP Detail		 Chr2:134486878 Tssr26508 900 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs227839436
MGI SNP Detail		 Chr2:134486929 Tssr26508 951 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs257695417
MGI SNP Detail		 Chr2:134486962 Tssr26508 984 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs215216421
MGI SNP Detail		 Chr2:134486963 Tssr26508 985 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs230518859
MGI SNP Detail		 Chr2:134487004 Tssr26508 1026 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250204889
MGI SNP Detail		 Chr2:134487017 Tssr26508 1039 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs212256059
MGI SNP Detail		 Chr2:134487023 Tssr26508 1045 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs235309707
MGI SNP Detail		 Chr2:134487127 Tssr26508 1149 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252756854
MGI SNP Detail		 Chr2:134487143 Tssr26508 1165 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs587352896
MGI SNP Detail		 Chr2:134487175 Tssr26508 1197 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215964816
MGI SNP Detail		 Chr2:134487182 Tssr26508 1204 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237986297
MGI SNP Detail		 Chr2:134487291 Tssr26508 1313 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs27252454
MGI SNP Detail		 Chr2:134487292 Tssr26508 1314 bp upstream
 SNP C/T C C C C C C T C C C C C C
rs223434274
MGI SNP Detail		 Chr2:134487293 Tssr26508 1315 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs245817194
MGI SNP Detail		 Chr2:134487386 Tssr26508 1408 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs32933634
MGI SNP Detail		 Chr2:134487423 Tssr26508 1445 bp upstream
 SNP A/G A G G G
rs33541994
MGI SNP Detail		 Chr2:134487426 Tssr26508 1448 bp upstream
 SNP C/G G C C C
rs33758605
MGI SNP Detail		 Chr2:134487429 Tssr26508 1451 bp upstream
 SNP A/T A T T T
rs581772202
MGI SNP Detail		 Chr2:134487462 Tssr26508 1484 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A A C A A A A A A C A A A A A A A A A A A A
rs260467055
MGI SNP Detail		 Chr2:134487498 Tssr26508 1520 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs221462326
MGI SNP Detail		 Chr2:134487591 Tssr26508 1613 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs244826086
MGI SNP Detail		 Chr2:134487599 Tssr26508 1621 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs27252453
MGI SNP Detail		 Chr2:134487685 Tssr26508 1707 bp upstream
 SNP C/T C C T T T C T T T T C T T C C
rs583090617
MGI SNP Detail		 Chr2:134487686 Tssr26508 1708 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs230559996
MGI SNP Detail		 Chr2:134487728 Tssr26508 1750 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254677175
MGI SNP Detail		 Chr2:134487734 Tssr26508 1756 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254111651
MGI SNP Detail		 Chr2:134487752 Tssr26508 1774 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs229489605
MGI SNP Detail		 Chr2:134487784 Tssr26508 1806 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G G G G G G G G G G G C G G G G
rs246831467
MGI SNP Detail		 Chr2:134487823 Tssr26508 1845 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C C C C C C C C T C C C C
rs29673148
MGI SNP Detail		 Chr2:134487851 Tssr26508 1873 bp upstream
 SNP A/G A A G A A
rs27252452
MGI SNP Detail		 Chr2:134487858 Tssr26508 1880 bp upstream
 SNP A/G G G A A A G A G A A G A A G G
rs251637174
MGI SNP Detail		 Chr2:134487875 Tssr26508 1897 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
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Showing SNP(s) 1 - 71 of 71
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory