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Mouse SNP Summary
Symbol
Name
ID
Tssr26888
transcription start site region 26888
MGI:5954655

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Showing SNP(s) 1 - 65 of 65

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs579614863
MGI SNP Detail
Chr2:153065469 Tspyl3 within coordinates of
Tssr26888 1828 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs28283242
MGI SNP Detail
Chr2:153065471 Tspyl3 within coordinates of
Tssr26888 1826 bp downstream
SNP A/G A A G A A A G A A G G A
rs587127676
MGI SNP Detail
Chr2:153065473 Tspyl3 within coordinates of
Tssr26888 1824 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs581196041
MGI SNP Detail
Chr2:153065579 Tspyl3 within coordinates of
Tssr26888 1718 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs28283241
MGI SNP Detail
Chr2:153065609 Tspyl3 within coordinates of
Tssr26888 1688 bp downstream
SNP C/T C C T C C C C T C C T T C
rs587279198
MGI SNP Detail
Chr2:153065611 Tspyl3 within coordinates of
Tssr26888 1686 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs50852755
MGI SNP Detail
Chr2:153065640 Tspyl3 within coordinates of
Tssr26888 1657 bp downstream
SNP A/G A G G
rs51964229
MGI SNP Detail
Chr2:153065646 Tspyl3 within coordinates of
Tssr26888 1651 bp downstream
SNP A/G G A A
rs581788412
MGI SNP Detail
Chr2:153065662 Tspyl3 within coordinates of
Tssr26888 1635 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs51762396
MGI SNP Detail
Chr2:153065694 Tspyl3 within coordinates of
Tssr26888 1603 bp downstream
SNP C/T T C C
rs579224982
MGI SNP Detail
Chr2:153065719 Tspyl3 within coordinates of
Tssr26888 1578 bp downstream
SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs582921382
MGI SNP Detail
Chr2:153065781 Tspyl3 within coordinates of
Tssr26888 1516 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585641879
MGI SNP Detail
Chr2:153065799 Tspyl3 within coordinates of
Tssr26888 1498 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47846913
MGI SNP Detail
Chr2:153065838 Tspyl3 within coordinates of
Tssr26888 1459 bp downstream
SNP A/G G A A
rs48278043
MGI SNP Detail
Chr2:153065849 Tspyl3 within coordinates of
Tssr26888 1448 bp downstream
SNP A/G G A A
rs48487917
MGI SNP Detail
Chr2:153065888 Tspyl3 within coordinates of
Tssr26888 1409 bp downstream
SNP A/G A G G
rs28283238
MGI SNP Detail
Chr2:153065991 Tspyl3 within coordinates of
Tssr26888 1306 bp downstream
SNP A/C A A C A A A A C A C C A
rs223006519
MGI SNP Detail
Chr2:153066047 Tspyl3 within coordinates of
Tssr26888 1250 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230962319
MGI SNP Detail
Chr2:153066152 Tspyl3 within coordinates of
Tssr26888 1145 bp downstream
SNP C/T T T T C T T T T C T T T T T T T T T C T T T C C C T C C T T T T T C C T T T T T C T T C T T T T T T T T
rs582946654
MGI SNP Detail
Chr2:153066352 Tspyl3 within coordinates of
Tssr26888 945 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs586770714
MGI SNP Detail
Chr2:153066432 Tspyl3 within coordinates of
Tssr26888 865 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs28283237
MGI SNP Detail
Chr2:153066487 Tspyl3 within coordinates of
Tssr26888 810 bp downstream
SNP G/T G G T G G G G G G T T G
rs584047713
MGI SNP Detail
Chr2:153066498 Tspyl3 within coordinates of
Tssr26888 799 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs587111696
MGI SNP Detail
Chr2:153066510 Tspyl3 within coordinates of
Tssr26888 787 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs581475628
MGI SNP Detail
Chr2:153066699 Tspyl3 within coordinates of
Tssr26888 598 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs584491431
MGI SNP Detail
Chr2:153066733 Tspyl3 within coordinates of
Tssr26888 564 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs28283236
MGI SNP Detail
Chr2:153066862 Tspyl3 within coordinates of
Tssr26888 435 bp downstream
SNP A/C C C C C C C A C C C C C C
rs243553703
MGI SNP Detail
Chr2:153066895 Tspyl3 within coordinates of
Tssr26888 402 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs265629884
MGI SNP Detail
Chr2:153066896 Tspyl3 within coordinates of
Tssr26888 401 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs33313544
MGI SNP Detail
Chr2:153066959 Cpgi12481 within coordinates of
Tspyl3 within coordinates of
Tssr26887 within coordinates of
Tssr26888 338 bp downstream
SNP A/T A T A T
rs250955728
MGI SNP Detail
Chr2:153067001 Cpgi12481 within coordinates of
Tspyl3 within coordinates of
Tssr26888 296 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28283235
MGI SNP Detail
Chr2:153067071 Cpgi12481 within coordinates of
Tspyl3 within coordinates of
Tssr26888 226 bp downstream
SNP C/T C C T C C T C C T C C T T C T C
rs224272490
MGI SNP Detail
Chr2:153067083 Cpgi12481 within coordinates of
Tspyl3 within coordinates of
Tssr26888 214 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242188409
MGI SNP Detail
Chr2:153067149 Cpgi12481 within coordinates of
Tspyl3 within coordinates of
Tssr26888 148 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs256115263
MGI SNP Detail
Chr2:153067156 Cpgi12481 within coordinates of
Tspyl3 within coordinates of
Tssr26888 141 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230179315
MGI SNP Detail
Chr2:153067230 Cpgi12481 within coordinates of
Tspyl3 within coordinates of
Tssr26888 67 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A
rs253115568
MGI SNP Detail
Chr2:153067316 Cpgi12481 within coordinates of
Tspyl3 within coordinates of
Tssr26888 2 bp upstream
Tssr26889 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217270292
MGI SNP Detail
Chr2:153067336 Cpgi12481 within coordinates of
Tspyl3 within coordinates of
Tssr26888 22 bp upstream
Tssr26889 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs28283234
MGI SNP Detail
Chr2:153067478 Tssr26888 164 bp upstream
SNP A/T T T T T T T A T T T T T T T
rs237938722
MGI SNP Detail
Chr2:153067485 Tssr26888 171 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249003463
MGI SNP Detail
Chr2:153067512 Tssr26888 198 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs581126242
MGI SNP Detail
Chr2:153067567 Tssr26888 253 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs216839385
MGI SNP Detail
Chr2:153067589 Tssr26888 275 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231055143
MGI SNP Detail
Chr2:153067658 Tssr26888 344 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs28283233
MGI SNP Detail
Chr2:153067708 Tssr26888 394 bp upstream
SNP A/G A A G A A G A A G G A A G G A G A
rs223712021
MGI SNP Detail
Chr2:153067733 Tssr26888 419 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs28283232
MGI SNP Detail
Chr2:153067737 Tssr26888 423 bp upstream
SNP A/G G G A G G A G G A A G G A A G G
rs28283231
MGI SNP Detail
Chr2:153067739 Tssr26888 425 bp upstream
SNP A/T A A A A A A A A T A
rs259802716
MGI SNP Detail
Chr2:153067801 Tssr26888 487 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33011068
MGI SNP Detail
Chr2:153067875 Tssr26888 561 bp upstream
SNP G/T T G T G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs241252826
MGI SNP Detail
Chr2:153067879 Tssr26888 565 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs252491212
MGI SNP Detail
Chr2:153067924 Tssr26888 610 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28283230
MGI SNP Detail
Chr2:153068006 Tssr26888 692 bp upstream
SNP C/T T C T T C T T C C T T C C T C T
rs235642028
MGI SNP Detail
Chr2:153068043 Tssr26888 729 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs28283229
MGI SNP Detail
Chr2:153068051 Tssr26888 737 bp upstream
SNP A/G A G A A G A A G A A A G A
rs229683374
MGI SNP Detail
Chr2:153068065 Tssr26888 751 bp upstream
SNP C/T T T T T T T T C T T T T T T T T T C T T C T T T T T T C T T T T T T T T T T T T T T T
rs248998360
MGI SNP Detail
Chr2:153068136 Tssr26888 822 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248875606
MGI SNP Detail
Chr2:153068265 Tssr26888 951 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs28283228
MGI SNP Detail
Chr2:153068435 Tssr26888 1121 bp upstream
SNP A/G A A G A A G A A G G A A G G A G A
rs33113540
MGI SNP Detail
Chr2:153068641 Tssr26888 1327 bp upstream
SNP G/T T T G T G
rs28283227
MGI SNP Detail
Chr2:153068651 Tssr26888 1337 bp upstream
SNP C/T T T C T T C T T C C T T C T C T
rs215515171
MGI SNP Detail
Chr2:153068951 Tssr26888 1637 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs236451284
MGI SNP Detail
Chr2:153068990 Tssr26888 1676 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263583141
MGI SNP Detail
Chr2:153069030 Tssr26888 1716 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs28283226
MGI SNP Detail
Chr2:153069034 Tssr26888 1720 bp upstream
SNP C/T C C T C C T C C T T C C T T C T C
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Showing SNP(s) 1 - 65 of 65

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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory