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Mouse SNP Summary
Symbol
Name
ID 		Tssr27527
transcription start site region 27527
MGI:5955294

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Showing SNP(s) 1 - 64 of 64

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs29825717
MGI SNP Detail		 Chr2:164585839 Tssr27527 1977 bp downstream
Wfdc3 within coordinates of
 SNP A/C A C C A C A
rs256268085
MGI SNP Detail		 Chr2:164585840 Tssr27527 1976 bp downstream
Wfdc3 within coordinates of
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs229585357
MGI SNP Detail		 Chr2:164585882 Tssr27527 1934 bp downstream
Wfdc3 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G G G G G G G G A G G G G G G G G G G G G
rs248348517
MGI SNP Detail		 Chr2:164585923 Tssr27527 1893 bp downstream
Wfdc3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51059024
MGI SNP Detail		 Chr2:164585950 Tssr27527 1866 bp downstream
Wfdc3 within coordinates of
 SNP A/G G A
rs232662700
MGI SNP Detail		 Chr2:164585977 Tssr27527 1839 bp downstream
Wfdc3 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252054155
MGI SNP Detail		 Chr2:164585978 Tssr27527 1838 bp downstream
Wfdc3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214929237
MGI SNP Detail		 Chr2:164586025 Tssr27527 1791 bp downstream
Wfdc3 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs231209106
MGI SNP Detail		 Chr2:164586039 Tssr27527 1777 bp downstream
Wfdc3 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs29624239
MGI SNP Detail		 Chr2:164586075 Tssr27527 1741 bp downstream
Wfdc3 within coordinates of
 SNP A/G A A G G G A
rs211913831
MGI SNP Detail		 Chr2:164586165 Tssr27527 1651 bp downstream
Wfdc3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs235189349
MGI SNP Detail		 Chr2:164586175 Tssr27527 1641 bp downstream
Wfdc3 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33458279
MGI SNP Detail		 Chr2:164586467 Tssr27527 1349 bp downstream
Wfdc3 within coordinates of
 SNP A/C A A C A C A
rs225055550
MGI SNP Detail		 Chr2:164586468 Tssr27527 1348 bp downstream
Wfdc3 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs247941009
MGI SNP Detail		 Chr2:164586473 Tssr27527 1343 bp downstream
Wfdc3 within coordinates of
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs257928710
MGI SNP Detail		 Chr2:164586582 Tssr27527 1234 bp downstream
Wfdc3 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs29720906
MGI SNP Detail		 Chr2:164586608 Tssr27527 1208 bp downstream
Wfdc3 within coordinates of
 SNP C/T T C T C T
rs238220298
MGI SNP Detail		 Chr2:164586633 Tssr27527 1183 bp downstream
Wfdc3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29716642
MGI SNP Detail		 Chr2:164586670 Tssr27527 1146 bp downstream
Wfdc3 within coordinates of
 SNP A/G A G A
rs584292161
MGI SNP Detail		 Chr2:164586737 Tssr27527 1079 bp downstream
Wfdc3 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs29673937
MGI SNP Detail		 Chr2:164586798 Tssr27527 1018 bp downstream
Wfdc3 within coordinates of
 SNP C/T C T C T C
rs242373111
MGI SNP Detail		 Chr2:164586803 Tssr27527 1013 bp downstream
Wfdc3 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs265799690
MGI SNP Detail		 Chr2:164586928 Tssr27527 888 bp downstream
Wfdc3 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs33521250
MGI SNP Detail		 Chr2:164586945 Tssr27527 871 bp downstream
Wfdc3 within coordinates of
 SNP C/T T C C T C T
rs256895013
MGI SNP Detail		 Chr2:164587107 Tssr27527 709 bp downstream
Wfdc3 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs214369077
MGI SNP Detail		 Chr2:164587120 Tssr27527 696 bp downstream
Wfdc3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225071528
MGI SNP Detail		 Chr2:164587128 Tssr27527 688 bp downstream
Wfdc3 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs242826800
MGI SNP Detail		 Chr2:164587152 Tssr27527 664 bp downstream
Wfdc3 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs211952530
MGI SNP Detail		 Chr2:164587200 Tssr27527 616 bp downstream
Wfdc3 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs235018576
MGI SNP Detail		 Chr2:164587347 Tssr27527 469 bp downstream
Wfdc3 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs260137811
MGI SNP Detail		 Chr2:164587352 Tssr27527 464 bp downstream
Wfdc3 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217196298
MGI SNP Detail		 Chr2:164587405 Tssr27527 411 bp downstream
Wfdc3 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G G G G G G G G A G G G G G G G G G G G G
rs237841791
MGI SNP Detail		 Chr2:164587433 Tssr27527 383 bp downstream
Wfdc3 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262507557
MGI SNP Detail		 Chr2:164587440 Tssr27527 376 bp downstream
Wfdc3 within coordinates of
 SNP A/G A A A G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G
rs222616270
MGI SNP Detail		 Chr2:164587470 Tssr27527 346 bp downstream
Wfdc3 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230875037
MGI SNP Detail		 Chr2:164587481 Tssr27527 335 bp downstream
Wfdc3 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs249743832
MGI SNP Detail		 Chr2:164587560 Cpgi12667 within coordinates of
Tssr27527 256 bp downstream
Wfdc3 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223710530
MGI SNP Detail		 Chr2:164587566 Cpgi12667 within coordinates of
Tssr27527 250 bp downstream
Wfdc3 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T T C C C C C C C C C C C T C C C C C C C C C C C C
rs242308215
MGI SNP Detail		 Chr2:164587609 Cpgi12667 within coordinates of
Tssr27527 207 bp downstream
Wfdc3 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs263765419
MGI SNP Detail		 Chr2:164587613 Cpgi12667 within coordinates of
Tssr27527 203 bp downstream
Wfdc3 within coordinates of
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs224698786
MGI SNP Detail		 Chr2:164587683 Cpgi12667 within coordinates of
Tssr27527 133 bp downstream
Wfdc3 within coordinates of
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G G C C C C C C C C C C C G C C C C C C C C C C C C
rs244575873
MGI SNP Detail		 Chr2:164587800 Cpgi12667 within coordinates of
Tssr27527 16 bp downstream
Wfdc3 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A A C C C C C C C C C C A C C C C C C C C C C C C
rs265202497
MGI SNP Detail		 Chr2:164587834 Cpgi12667 within coordinates of
Tssr27527 within coordinates of
Wfdc3 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs224880667
MGI SNP Detail		 Chr2:164588177 Cpgi12667 within coordinates of
Dnttip1 within coordinates of
Tssr27527 343 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs242864051
MGI SNP Detail		 Chr2:164588182 Cpgi12667 within coordinates of
Dnttip1 within coordinates of
Tssr27527 348 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs253742971
MGI SNP Detail		 Chr2:164588204 Cpgi12667 within coordinates of
Dnttip1 within coordinates of
Tssr27527 370 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs229021310
MGI SNP Detail		 Chr2:164588207 Cpgi12667 within coordinates of
Dnttip1 within coordinates of
Tssr27527 373 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs259152838
MGI SNP Detail		 Chr2:164588483 Cpgi12667 within coordinates of
Dnttip1 within coordinates of
Tssr27527 649 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs578837634
MGI SNP Detail		 Chr2:164588734 Dnttip1 within coordinates of
Tssr27527 900 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216513940
MGI SNP Detail		 Chr2:164588803 Dnttip1 within coordinates of
Tssr27527 969 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs239964346
MGI SNP Detail		 Chr2:164588845 Dnttip1 within coordinates of
Tssr27527 1011 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251454007
MGI SNP Detail		 Chr2:164588875 Dnttip1 within coordinates of
Tssr27527 1041 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs581028918
MGI SNP Detail		 Chr2:164588941 Dnttip1 within coordinates of
Tssr27527 1107 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs213729440
MGI SNP Detail		 Chr2:164588976 Dnttip1 within coordinates of
Tssr27527 1142 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A A G G G G G G G G G G G A G G G G G G G A G G G A
rs230615232
MGI SNP Detail		 Chr2:164589045 Dnttip1 within coordinates of
Tssr27527 1211 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T T G G G G G G G G G G G T G G G G G G G G G G G G
rs249678429
MGI SNP Detail		 Chr2:164589046 Dnttip1 within coordinates of
Tssr27527 1212 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T T C C C C C C C C C C C T C C C C C C C C C C C C
rs223663260
MGI SNP Detail		 Chr2:164589176 Dnttip1 within coordinates of
Tssr27527 1342 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239652159
MGI SNP Detail		 Chr2:164589233 Dnttip1 within coordinates of
Tssr27527 1399 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs263529085
MGI SNP Detail		 Chr2:164589547 Dnttip1 within coordinates of
Tssr27527 1713 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224436183
MGI SNP Detail		 Chr2:164589549 Dnttip1 within coordinates of
Tssr27527 1715 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G G G G G G G A G G G G G G A G G G G
rs247317316
MGI SNP Detail		 Chr2:164589554 Dnttip1 within coordinates of
Tssr27527 1720 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs262541200
MGI SNP Detail		 Chr2:164589614 Dnttip1 within coordinates of
Tssr27527 1780 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs219003308
MGI SNP Detail		 Chr2:164589775 Dnttip1 within coordinates of
Tssr27527 1941 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs236399464
MGI SNP Detail		 Chr2:164589786 Dnttip1 within coordinates of
Tssr27527 1952 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
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Showing SNP(s) 1 - 64 of 64
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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