Tssr28056 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Tssr28056
transcription start site region 28056
MGI:5955823

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Showing SNP(s) 1 - 82 of 82

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs245335510 MGI SNP Detail	Chr2:178009189	Sycp2 within coordinates of Tssr28056 1976 bp downstream	SNP	A/G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs260506317 MGI SNP Detail	Chr2:178009190	Sycp2 within coordinates of Tssr28056 1975 bp downstream	SNP	A/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs227594824 MGI SNP Detail	Chr2:178009262	Sycp2 within coordinates of Tssr28056 1903 bp downstream	SNP	A/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	A	G	G	G	G	G	A	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs27685348 MGI SNP Detail	Chr2:178009278	Sycp2 within coordinates of Tssr28056 1887 bp downstream	SNP	A/T		T		T	T		T		T			T								T					T	T			T					T	T				T		A												T
rs27685347 MGI SNP Detail	Chr2:178009359	Sycp2 within coordinates of Tssr28056 1806 bp downstream	SNP	A/G		G		G	G		G					G								G					G	G								G	G				G		G												A
rs225438137 MGI SNP Detail	Chr2:178009438	Sycp2 within coordinates of Tssr28056 1727 bp downstream	SNP	G/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	G	T	T	T	T	G	T	T	T	T	T	G	T	T	T	T	T	T		G	T	T	T	T	T	T	T	G	T	T	T	T
rs239431092 MGI SNP Detail	Chr2:178009446	Sycp2 within coordinates of Tssr28056 1719 bp downstream	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	T	C	C	C	C	T	C	C	C	C	C	T	C	C	C	C	C	C		T	C	C	C	C	C	C	C		C	C	C	C
rs264541621 MGI SNP Detail	Chr2:178009448	Sycp2 within coordinates of Tssr28056 1717 bp downstream	SNP	A/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	A	T	T	A	T	T	T	T	A	T	T	T	T	T		T	T	T	T	T	T		A	T	T	T	T	T	T	T		T	T	T	T
rs228501717 MGI SNP Detail	Chr2:178009542	Sycp2 within coordinates of Tssr28056 1623 bp downstream	SNP	C/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T		C	T	T	T	T
rs259067112 MGI SNP Detail	Chr2:178009591	Sycp2 within coordinates of Tssr28056 1574 bp downstream	SNP	A/T	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	T	A	A	A	A	A	A	A	T	A	A	A	A	A	T	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A
rs219037319 MGI SNP Detail	Chr2:178009594	Sycp2 within coordinates of Tssr28056 1571 bp downstream	SNP	G/T	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G	G	G	G	T	G	G	G	G	G	T	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs27685346 MGI SNP Detail	Chr2:178009626	Sycp2 within coordinates of Tssr28056 1539 bp downstream	SNP	A/C		A		A	A		A		A			A								A					A	A			A					A	A				A		C												A
rs27685345 MGI SNP Detail	Chr2:178009650	Sycp2 within coordinates of Tssr28056 1515 bp downstream	SNP	A/G		G		G	G		G		G			G								A					G	G			G					A	G				G		G												G
rs215951402 MGI SNP Detail	Chr2:178009670	Sycp2 within coordinates of Tssr28056 1495 bp downstream	SNP	A/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	A	G	G	G	G	G	A	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs231480013 MGI SNP Detail	Chr2:178009695	Sycp2 within coordinates of Tssr28056 1470 bp downstream	SNP	G/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	G	T	T	T	T
rs257977175 MGI SNP Detail	Chr2:178009755	Sycp2 within coordinates of Tssr28056 1410 bp downstream	SNP	C/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G	G	G	G	G	G	G	C	G	G	G	G	G	C	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs212441802 MGI SNP Detail	Chr2:178009760	Sycp2 within coordinates of Tssr28056 1405 bp downstream	SNP	A/C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		A	C	C	C	C	C	C	C	C	C	C	C	C
rs235607649 MGI SNP Detail	Chr2:178009797	Sycp2 within coordinates of Tssr28056 1368 bp downstream	SNP	C/G	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		G	C	C	C	C	C	C	C	C	C	C	C	C
rs263904167 MGI SNP Detail	Chr2:178009843	Sycp2 within coordinates of Tssr28056 1322 bp downstream	SNP	A/G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs27685344 MGI SNP Detail	Chr2:178009844	Sycp2 within coordinates of Tssr28056 1321 bp downstream	SNP	C/T		C		C	C		C		C			C								T					C	C			C					T	C				C		T												C
rs27685343 MGI SNP Detail	Chr2:178009968	Sycp2 within coordinates of Tssr28056 1197 bp downstream	SNP	A/T		T		T			T													T					T	T													T		A												T
rs253948639 MGI SNP Detail	Chr2:178009990	Sycp2 within coordinates of Tssr28056 1175 bp downstream	SNP	A/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	A	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		A	T	T	T	T	T	T	T	T	T	T	T	T
rs219921819 MGI SNP Detail	Chr2:178010065	Sycp2 within coordinates of Tssr28056 1100 bp downstream	SNP	A/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs246489981 MGI SNP Detail	Chr2:178010086	Sycp2 within coordinates of Tssr28056 1079 bp downstream	SNP	G/T	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		T	G	G	G	G	G	G	G	G	G	G	G	G
rs261273426 MGI SNP Detail	Chr2:178010101	Sycp2 within coordinates of Tssr28056 1064 bp downstream	SNP	G/T	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs228935457 MGI SNP Detail	Chr2:178010111	Sycp2 within coordinates of Tssr28056 1054 bp downstream	SNP	A/C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs247163057 MGI SNP Detail	Chr2:178010117	Sycp2 within coordinates of Tssr28056 1048 bp downstream	SNP	A/C	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs266094516 MGI SNP Detail	Chr2:178010124	Sycp2 within coordinates of Tssr28056 1041 bp downstream	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs226731722 MGI SNP Detail	Chr2:178010160	Sycp2 within coordinates of Tssr28056 1005 bp downstream	SNP	A/C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs27685342 MGI SNP Detail	Chr2:178010202	Sycp2 within coordinates of Tssr28056 963 bp downstream	SNP	C/T		C		C	C		C					C								T					C	C								T	C				C		T												C
rs255344422 MGI SNP Detail	Chr2:178010247	Sycp2 within coordinates of Tssr28056 918 bp downstream	SNP	C/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs27685341 MGI SNP Detail	Chr2:178010434	Sycp2 within coordinates of Tssr28056 731 bp downstream	SNP	A/G		A		A	A		A		A											A					A	A			A					A	A				A		G												A
rs256338751 MGI SNP Detail	Chr2:178010471	Sycp2 within coordinates of Tssr28056 694 bp downstream	SNP	C/T	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs27685340 MGI SNP Detail	Chr2:178010540	Sycp2 within coordinates of Tssr28056 625 bp downstream	SNP	A/G		A		A	A		A		A			A								G					A	A			A					G	A				A		A												A
rs237383055 MGI SNP Detail	Chr2:178010603	Sycp2 within coordinates of Tssr28056 562 bp downstream	SNP	G/T	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G		G	G	G	G	G	G	G		T	G	G	G	G
rs27685339 MGI SNP Detail	Chr2:178010627	Sycp2 within coordinates of Tssr28056 538 bp downstream	SNP	C/T		C		C	C		C		C			C								T					C	C			C					T	C				C		T												C
rs217644528 MGI SNP Detail	Chr2:178010661	Sycp2 within coordinates of Tssr28056 504 bp downstream	SNP	A/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G		G		A	G	G	G	G
rs234251532 MGI SNP Detail	Chr2:178010723	Sycp2 within coordinates of Tssr28056 442 bp downstream	SNP	A/G	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs253890988 MGI SNP Detail	Chr2:178010770	Sycp2 within coordinates of Tssr28056 395 bp downstream	SNP	A/G	G	G		G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs27685338 MGI SNP Detail	Chr2:178010831	Sycp2 within coordinates of Tssr28056 334 bp downstream	SNP	G/T		T		T	T		T		T			T								G					T	T			T					G	T				T		T												T
rs219870899 MGI SNP Detail	Chr2:178010893	Sycp2 within coordinates of Tssr28056 272 bp downstream	SNP	C/T	T	T		T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T		T	T	T	T	T		T	T	T		T		T	T	C	T	T	T	T
rs27685337 MGI SNP Detail	Chr2:178011013	Sycp2 within coordinates of Tssr28056 152 bp downstream	SNP	C/T		T		T	T		T		T			T								T					T	T			T					T	T				T		C												T
rs27685336 MGI SNP Detail	Chr2:178011137	Sycp2 within coordinates of Tssr28056 28 bp downstream	SNP	C/T		T		T	T		T		T			T								C					T	T			T					C	T				T		T												T
rs221070909 MGI SNP Detail	Chr2:178011246	Sycp2 within coordinates of Tssr28056 71 bp upstream	SNP	G/T	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G
rs27685335 MGI SNP Detail	Chr2:178011276	Sycp2 within coordinates of Tssr28056 101 bp upstream	SNP	A/T		A		A	A		A		A			A								A					A	A			A					A	A				A		T												A
rs578344825 MGI SNP Detail	Chr2:178011283	Sycp2 within coordinates of Tssr28056 108 bp upstream	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs581205593 MGI SNP Detail	Chr2:178011284	Sycp2 within coordinates of Tssr28056 109 bp upstream	SNP	C/G	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	G	C	C	C	C
rs259632011 MGI SNP Detail	Chr2:178011339	Sycp2 within coordinates of Tssr28056 164 bp upstream	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs584291404 MGI SNP Detail	Chr2:178011350	Sycp2 within coordinates of Tssr28056 175 bp upstream	SNP	A/T	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	T	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		T	A	A	A	A	A	A	A	A	A	A	A	A
rs255277893 MGI SNP Detail	Chr2:178011414	Sycp2 within coordinates of Tssr28056 239 bp upstream	SNP	C/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs226030004 MGI SNP Detail	Chr2:178011443	Sycp2 within coordinates of Tssr28056 268 bp upstream	SNP	A/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	A	G	G	G	G	G	A		G	G	G	G	G		G	G	G	G	G	G	G		G	G	G	G	G
rs249131489 MGI SNP Detail	Chr2:178011469	Sycp2 within coordinates of Tssr28056 294 bp upstream	SNP	A/C	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	C	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A		C	A	A	A	A	A	A	A	A	A	A	A	A
rs264660522 MGI SNP Detail	Chr2:178011528	Sycp2 within coordinates of Tssr28056 353 bp upstream	SNP	A/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs228872258 MGI SNP Detail	Chr2:178011627	Sycp2 within coordinates of Tssr28056 452 bp upstream	SNP	A/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs259301379 MGI SNP Detail	Chr2:178011630	Sycp2 within coordinates of Tssr28056 455 bp upstream	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs217574504 MGI SNP Detail	Chr2:178011715	Sycp2 within coordinates of Tssr28056 540 bp upstream	SNP	A/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		A	G	G	G	G	G	G	G	G	G	G	G	G
rs234186139 MGI SNP Detail	Chr2:178011729	Sycp2 within coordinates of Tssr28056 554 bp upstream	SNP	C/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		C	T	T	T	T	T	T	T	T	T	T	T	T
rs247484053 MGI SNP Detail	Chr2:178011767	Sycp2 within coordinates of Tssr28056 592 bp upstream	SNP	C/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs213934811 MGI SNP Detail	Chr2:178011826	Sycp2 within coordinates of Tssr28056 651 bp upstream	SNP	C/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs239387091 MGI SNP Detail	Chr2:178011883	Sycp2 within coordinates of Tssr28056 708 bp upstream	SNP	C/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T	T	T	T	C	C	C	T	T	T	C	T	C	T	T	T	T		C	T	T	T	C	T	T	T	C	T	T	T	C
rs255860778 MGI SNP Detail	Chr2:178011889	Sycp2 within coordinates of Tssr28056 714 bp upstream	SNP	C/G	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	G	C	C	C	C
rs221613337 MGI SNP Detail	Chr2:178011913	Sycp2 within coordinates of Tssr28056 738 bp upstream	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	T	C	C	C	C	C	T	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C
rs27685334 MGI SNP Detail	Chr2:178011981	Sycp2 within coordinates of Tssr28056 806 bp upstream	SNP	A/G		G		G	G		G		G			G								A					G	G			G					A	G				G		A												G
rs252968833 MGI SNP Detail	Chr2:178011998	Sycp2 within coordinates of Tssr28056 823 bp upstream	SNP	A/C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	A	C	C	C	C
rs27685333 MGI SNP Detail	Chr2:178012093	Sycp2 within coordinates of Tssr28056 918 bp upstream	SNP	G/T		T		T	T		T		T			T								G					T	T			T					G	T				T		T												T
rs579154618 MGI SNP Detail	Chr2:178012255	Sycp2 within coordinates of Tssr28056 1080 bp upstream	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs239815459 MGI SNP Detail	Chr2:178012311	Sycp2 within coordinates of Tssr28056 1136 bp upstream	SNP	A/C	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs255203802 MGI SNP Detail	Chr2:178012363	Sycp2 within coordinates of Tssr28056 1188 bp upstream	SNP	A/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		A	G	G	G	G	G	G	G	G	G	G	G	G
rs27685332 MGI SNP Detail	Chr2:178012412	Rr48230 within coordinates of Sycp2 within coordinates of Tssr28056 1237 bp upstream	SNP	A/G		G		G	G		G		G			G								G					G	G			G					G	G				G		G												A
rs243917695 MGI SNP Detail	Chr2:178012424	Rr48230 within coordinates of Sycp2 within coordinates of Tssr28056 1249 bp upstream	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C	C	C	T	C	C	C	C	C	T	C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C
rs261926469 MGI SNP Detail	Chr2:178012538	Rr48230 within coordinates of Sycp2 within coordinates of Tssr28056 1363 bp upstream	SNP	A/C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	A	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		A	C	C	C	C	C	C	C	C	C	C	C	C
rs234090661 MGI SNP Detail	Chr2:178012561	Rr48230 within coordinates of Sycp2 within coordinates of Tssr28056 1386 bp upstream	SNP	A/G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A	A	A	A	G	A	A	A	A	A	G	A	A	A	A	A	A		G	A	A	A	A	A	A	A	G	A	A	A	A
rs242050073 MGI SNP Detail	Chr2:178012627	Rr48230 within coordinates of Sycp2 within coordinates of Tssr28056 1452 bp upstream	SNP	A/T	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	T	A	A	A	A	A	A	A	T	A	A	A	A	A	T	A	A	A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A
rs261344724 MGI SNP Detail	Chr2:178012696	Rr48230 within coordinates of Sycp2 within coordinates of Tssr28056 1521 bp upstream	SNP	A/G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs227492745 MGI SNP Detail	Chr2:178012704	Rr48230 within coordinates of Sycp2 within coordinates of Tssr28056 1529 bp upstream	SNP	A/G	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs247423558 MGI SNP Detail	Chr2:178012707	Rr48230 within coordinates of Sycp2 within coordinates of Tssr28056 1532 bp upstream	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs213871401 MGI SNP Detail	Chr2:178012799	Rr48230 within coordinates of Sycp2 within coordinates of Tssr28056 1624 bp upstream	SNP	A/G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	G	G	G	A	G	G		G	G	A	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs231168158 MGI SNP Detail	Chr2:178012846	Sycp2 within coordinates of Tssr28056 1671 bp upstream	SNP	C/T	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C		T	C	C	C	C
rs253247402 MGI SNP Detail	Chr2:178012853	Sycp2 within coordinates of Tssr28056 1678 bp upstream	SNP	C/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	C	T	T	T	T	C	T	C	T	T	T	C	T	T	T	T	T	T		C	T	T	T	T	T	T		C	T	T	T	T
rs213194407 MGI SNP Detail	Chr2:178012972	Sycp2 within coordinates of Tssr28056 1797 bp upstream	SNP	A/T	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	T	A	A	A	A
rs242576963 MGI SNP Detail	Chr2:178013061	Sycp2 within coordinates of Tssr28056 1886 bp upstream	SNP	C/T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		C	T	T	T	T	T	T	T	T	T	T	T	T
rs252927486 MGI SNP Detail	Chr2:178013093	Sycp2 within coordinates of Tssr28056 1918 bp upstream	SNP	G/T	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	T	G	G	G	G

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Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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