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Mouse SNP Summary
Symbol
Name
ID 		Tssr28904
transcription start site region 28904
MGI:5956671

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Showing SNP(s) 1 - 37 of 37

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C57BL/6J
CAST/EiJ
DBA/2J
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs3162595
MGI SNP Detail		 Chr3:37533636 Afg2a within coordinates of
Tssr28904 1929 bp upstream
 SNP A/C C C C A C C C
rs3162596
MGI SNP Detail		 Chr3:37533962 Afg2a within coordinates of
Tssr28904 1603 bp upstream
 SNP A/G A A A A G A G G A G A G A A G A A
rs30260611
MGI SNP Detail		 Chr3:37534145 Afg2a within coordinates of
Tssr28904 1420 bp upstream
 SNP A/T T T A T T T
rs30993575
MGI SNP Detail		 Chr3:37534221 Afg2a within coordinates of
Tssr28904 1344 bp upstream
 SNP C/T T C T T T
rs31085564
MGI SNP Detail		 Chr3:37534232 Afg2a within coordinates of
Tssr28904 1333 bp upstream
 SNP C/G C G C
rs227860749
MGI SNP Detail		 Chr3:37534262 Afg2a within coordinates of
Tssr28904 1303 bp upstream
 SNP A/G G A
rs45702630
MGI SNP Detail		 Chr3:37534343 Afg2a within coordinates of
Tssr28904 1222 bp upstream
 SNP G G G
rs50796185
MGI SNP Detail		 Chr3:37534346 Afg2a within coordinates of
Tssr28904 1219 bp upstream
 SNP C/T C C C T
rs52591976
MGI SNP Detail		 Chr3:37534429 Afg2a within coordinates of
Tssr28904 1136 bp upstream
 SNP A A A A
rs50131616
MGI SNP Detail		 Chr3:37534657 Afg2a within coordinates of
Tssr28904 908 bp upstream
 SNP C C C C C C
rs46609977
MGI SNP Detail		 Chr3:37534707 Afg2a within coordinates of
Tssr28904 858 bp upstream
 SNP C C C C C
rs48023779
MGI SNP Detail		 Chr3:37534715 Afg2a within coordinates of
Tssr28904 850 bp upstream
 SNP A A A A A A
rs3158686
MGI SNP Detail		 Chr3:37534802 Afg2a within coordinates of
Tssr28904 763 bp upstream
 SNP C C C C C C
rs3162597
MGI SNP Detail		 Chr3:37534886 Afg2a within coordinates of
Tssr28904 679 bp upstream
 SNP A/G G G G G G G G A G A G G G
rs3162598
MGI SNP Detail		 Chr3:37534901 Afg2a within coordinates of
Tssr28904 664 bp upstream
 SNP T T T T T
rs30357074
MGI SNP Detail		 Chr3:37534910 Afg2a within coordinates of
Tssr28904 655 bp upstream
 SNP A/G G A
rs31338659
MGI SNP Detail		 Chr3:37535359 Afg2a within coordinates of
Tssr28904 206 bp upstream
 SNP A/G A A G A
rs51164618
MGI SNP Detail		 Chr3:37535614 Afg2a within coordinates of
Cpgi13098 within coordinates of
Tssr28904 25 bp downstream
 SNP A A A A
rs50369400
MGI SNP Detail		 Chr3:37535654 Afg2a within coordinates of
Cpgi13098 within coordinates of
Tssr28904 65 bp downstream
 SNP C C C
rs48539192
MGI SNP Detail		 Chr3:37535694 Afg2a within coordinates of
Cpgi13098 within coordinates of
Tssr28904 105 bp downstream
 SNP C C
rs50655885
MGI SNP Detail		 Chr3:37535725 Afg2a within coordinates of
Tssr28904 136 bp downstream
 SNP C C C C
rs47725759
MGI SNP Detail		 Chr3:37535771 Afg2a within coordinates of
Tssr28904 182 bp downstream
 SNP C C C C
rs49390586
MGI SNP Detail		 Chr3:37535839 Afg2a within coordinates of
Tssr28904 250 bp downstream
 SNP G G G G G
rs46064575
MGI SNP Detail		 Chr3:37535876 Afg2a within coordinates of
Tssr28904 287 bp downstream
 SNP T T T
rs30182925
MGI SNP Detail		 Chr3:37535926 Afg2a within coordinates of
Tssr28904 337 bp downstream
 SNP A/G G A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C57BL/6J
CAST/EiJ
DBA/2J
KK/HlJ
LG/J
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs30073960
MGI SNP Detail		 Chr3:37536447 Afg2a within coordinates of
Tssr28904 858 bp downstream
 SNP A/G A G A A A A A A A G
rs3158688
MGI SNP Detail		 Chr3:37536638 Afg2a within coordinates of
Tssr28904 1049 bp downstream
 SNP G G G G G G
rs3162600
MGI SNP Detail		 Chr3:37536708 Afg2a within coordinates of
Tssr28904 1119 bp downstream
 SNP A A A A A A
rs3162601
MGI SNP Detail		 Chr3:37536717 Afg2a within coordinates of
Tssr28904 1128 bp downstream
 SNP A/G A A A G G A G A G G A
rs45878448
MGI SNP Detail		 Chr3:37536742 Afg2a within coordinates of
Tssr28904 1153 bp downstream
 SNP T T T T T T
rs49379978
MGI SNP Detail		 Chr3:37536743 Afg2a within coordinates of
Tssr28904 1154 bp downstream
 SNP T T T T T T
rs255987268
MGI SNP Detail		 Chr3:37536928 Afg2a within coordinates of
Tssr28904 1339 bp downstream
 SNP C/T T C
rs30074965
MGI SNP Detail		 Chr3:37536941 Afg2a within coordinates of
Tssr28904 1352 bp downstream
 SNP A/G A A A G A G A G A A
rs3158690
MGI SNP Detail		 Chr3:37536972 Afg2a within coordinates of
Tssr28904 1383 bp downstream
 SNP G/T T T T T T G T G T G T T
rs3162602
MGI SNP Detail		 Chr3:37537207 Afg2a within coordinates of
Tssr28904 1618 bp downstream
 SNP A/G G A A A
rs3162604
MGI SNP Detail		 Chr3:37537477 Afg2a within coordinates of
Tssr28904 1888 bp downstream
 SNP C/T C T T C C C
rs3162605
MGI SNP Detail		 Chr3:37537538 Afg2a within coordinates of
Tssr28904 1949 bp downstream
 SNP A/G A A G A A A
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Showing SNP(s) 1 - 37 of 37
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory