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Mouse SNP Summary
Symbol
Name
ID
Tssr28979
transcription start site region 28979
MGI:5956746

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Showing SNP(s) 1 - 57 of 57

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs265115762
MGI SNP Detail
Chr3:40902387 Tssr28979 1993 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs232576990
MGI SNP Detail
Chr3:40902441 Tssr28979 1939 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T T C C C C T C C C C T C T C C C C C C C T C C C C
rs247869141
MGI SNP Detail
Chr3:40902473 Tssr28979 1907 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A A T T T T A T T T T A T A T T T T T T T A T T T T
rs264472674
MGI SNP Detail
Chr3:40902476 Tssr28979 1904 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T T G G G G T G G G G T G T G G G G G G G G G G G G
rs228819281
MGI SNP Detail
Chr3:40902627 Tssr28979 1753 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244622871
MGI SNP Detail
Chr3:40902767 Tssr28979 1613 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs212493594
MGI SNP Detail
Chr3:40902771 Tssr28979 1609 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226816366
MGI SNP Detail
Chr3:40902836 Tssr28979 1544 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs251014447
MGI SNP Detail
Chr3:40902860 Tssr28979 1520 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G A G G G G A G A G G G G G G G G G G G G
rs216879584
MGI SNP Detail
Chr3:40902864 Tssr28979 1516 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs237672734
MGI SNP Detail
Chr3:40902944 Tssr28979 1436 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs264015586
MGI SNP Detail
Chr3:40903000 Tssr28979 1380 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs216377911
MGI SNP Detail
Chr3:40903070 Tssr28979 1310 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G A G G G G A G A G G G G G G G G G G G G
rs230644334
MGI SNP Detail
Chr3:40903148 Tssr28979 1232 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248145891
MGI SNP Detail
Chr3:40903151 Tssr28979 1229 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581750315
MGI SNP Detail
Chr3:40903163 Tssr28979 1217 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A A T T T T A T T T T A T A T T T T T T T T T T T T
rs584357216
MGI SNP Detail
Chr3:40903239 Tssr28979 1141 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs220043937
MGI SNP Detail
Chr3:40903284 Tssr28979 1096 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245799665
MGI SNP Detail
Chr3:40903324 Tssr28979 1056 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs259364533
MGI SNP Detail
Chr3:40903363 Tssr28979 1017 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs225389616
MGI SNP Detail
Chr3:40903377 Tssr28979 1003 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579164274
MGI SNP Detail
Chr3:40903397 Tssr28979 983 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs586019964
MGI SNP Detail
Chr3:40903416 Tssr28979 964 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs245516042
MGI SNP Detail
Chr3:40903515 Gm64655 within coordinates of
Tssr28979 865 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C C A A A A C A A A A C A C A A A A A A A A A A A A
rs266148017
MGI SNP Detail
Chr3:40903529 Gm64655 within coordinates of
Tssr28979 851 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222749186
MGI SNP Detail
Chr3:40903576 Cpgi13115 within coordinates of
Gm64655 within coordinates of
Tssr28979 804 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238183445
MGI SNP Detail
Chr3:40903648 Cpgi13115 within coordinates of
Gm64655 within coordinates of
Tssr28979 732 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245307459
MGI SNP Detail
Chr3:40903803 Cpgi13115 within coordinates of
Gm64655 within coordinates of
Tssr28979 577 bp upstream
SNP C/T T C
rs226976624
MGI SNP Detail
Chr3:40903949 Cpgi13115 within coordinates of
Gm64655 within coordinates of
Rr397652 within coordinates of
Tssr28979 431 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs255574291
MGI SNP Detail
Chr3:40903965 Cpgi13115 within coordinates of
Rr397652 within coordinates of
Tssr28979 415 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs263778342
MGI SNP Detail
Chr3:40904018 Cpgi13115 within coordinates of
Rr397652 within coordinates of
Tssr28979 362 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs231812597
MGI SNP Detail
Chr3:40904302 Cpgi13115 within coordinates of
Larp1b within coordinates of
Tssr28979 78 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T
rs254493095
MGI SNP Detail
Chr3:40904710 Cpgi13115 within coordinates of
Larp1b within coordinates of
Tssr28979 319 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C
rs582044016
MGI SNP Detail
Chr3:40904929 Cpgi13115 within coordinates of
Larp1b within coordinates of
Tssr28979 538 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G
rs585878439
MGI SNP Detail
Chr3:40904933 Cpgi13115 within coordinates of
Larp1b within coordinates of
Tssr28979 542 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs579820108
MGI SNP Detail
Chr3:40904940 Cpgi13115 within coordinates of
Larp1b within coordinates of
Tssr28979 549 bp downstream
SNP A/C C C C C C C C C C C C C C C A C C C C C C C C C C C C C A C C C C C C C C C C C
rs216504356
MGI SNP Detail
Chr3:40905001 Cpgi13115 within coordinates of
Larp1b within coordinates of
Tssr28979 610 bp downstream
SNP C/G G G G G G G G G G G G G G G G G C G C G G G G C C G G G C G G G G C G C G G G G G C G C G C G
rs230415170
MGI SNP Detail
Chr3:40905022 Cpgi13115 within coordinates of
Larp1b within coordinates of
Tssr28979 631 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs242041160
MGI SNP Detail
Chr3:40905167 Cpgi13115 within coordinates of
Larp1b within coordinates of
Tssr28979 776 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G G A G G G G A G A G G G G G G G G G G G
rs51453867
MGI SNP Detail
Chr3:40905388 Cpgi13115 within coordinates of
Larp1b within coordinates of
Tssr28979 997 bp downstream
SNP A/G A A A G A G G A G G A
rs214351820
MGI SNP Detail
Chr3:40905530 Cpgi13115 within coordinates of
Larp1b within coordinates of
Tssr28979 1139 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T T C C C C T C C C C T C T C C C C C C C C C C C C
rs236209219
MGI SNP Detail
Chr3:40905582 Cpgi13115 within coordinates of
Larp1b within coordinates of
Tssr28979 1191 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T T C C C T C C C C T C T C C C C C C C T C C C C
rs263254447
MGI SNP Detail
Chr3:40905593 Cpgi13115 within coordinates of
Larp1b within coordinates of
Tssr28979 1202 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs224085381
MGI SNP Detail
Chr3:40905596 Cpgi13115 within coordinates of
Larp1b within coordinates of
Tssr28979 1205 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs242959172
MGI SNP Detail
Chr3:40905666 Larp1b within coordinates of
Tssr28979 1275 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs255425696
MGI SNP Detail
Chr3:40905679 Larp1b within coordinates of
Tssr28979 1288 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222897194
MGI SNP Detail
Chr3:40905747 Larp1b within coordinates of
Tssr28979 1356 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A A G G G G A G G G G A G A G G G G G G G A G G G G
rs238119938
MGI SNP Detail
Chr3:40905806 Larp1b within coordinates of
Tssr28979 1415 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256121568
MGI SNP Detail
Chr3:40905816 Larp1b within coordinates of
Tssr28979 1425 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs223566692
MGI SNP Detail
Chr3:40905940 Larp1b within coordinates of
Tssr28979 1549 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30897141
MGI SNP Detail
Chr3:40906019 Larp1b within coordinates of
Tssr28979 1628 bp downstream
SNP A/G A A A A G
rs265773979
MGI SNP Detail
Chr3:40906103 Larp1b within coordinates of
Tssr28979 1712 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231899184
MGI SNP Detail
Chr3:40906129 Larp1b within coordinates of
Tssr28979 1738 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G G A A A A G A A A A G A G A A A A A A A A A A A A
rs260500813
MGI SNP Detail
Chr3:40906162 Larp1b within coordinates of
Tssr28979 1771 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs258698784
MGI SNP Detail
Chr3:40906178 Larp1b within coordinates of
Tssr28979 1787 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224135540
MGI SNP Detail
Chr3:40906307 Larp1b within coordinates of
Tssr28979 1916 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C C T T T T C T T T T C T C T T T T T T T C T T T T
rs241979090
MGI SNP Detail
Chr3:40906367 Larp1b within coordinates of
Tssr28979 1976 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
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Showing SNP(s) 1 - 57 of 57

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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory