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Mouse SNP Summary
Symbol
Name
ID
Tssr28989
transcription start site region 28989
MGI:5956756

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Showing SNP(s) 1 - 75 of 75

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219940069
MGI SNP Detail
Chr3:41042471 Tssr28989 1982 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs236913820
MGI SNP Detail
Chr3:41042483 Tssr28989 1970 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs250609420
MGI SNP Detail
Chr3:41042511 Tssr28989 1942 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A A C A A A A C A A A A A C A A A A C A C A A A A A A A C A A A A
rs587208188
MGI SNP Detail
Chr3:41042512 Tssr28989 1941 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A
rs581530495
MGI SNP Detail
Chr3:41042513 Tssr28989 1940 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs219521575
MGI SNP Detail
Chr3:41042634 Tssr28989 1819 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A C A A A A A A A A A A C A A A A A A A A A A A A A A
rs240069439
MGI SNP Detail
Chr3:41042659 Tssr28989 1794 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs251282755
MGI SNP Detail
Chr3:41042670 Tssr28989 1783 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222798609
MGI SNP Detail
Chr3:41042675 Tssr28989 1778 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs250643821
MGI SNP Detail
Chr3:41042737 Tssr28989 1716 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T T T T T T A T A T T T T T T A T T T T
rs262176026
MGI SNP Detail
Chr3:41042883 Tssr28989 1570 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228559667
MGI SNP Detail
Chr3:41042886 Tssr28989 1567 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244464536
MGI SNP Detail
Chr3:41042972 Tssr28989 1481 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs50262494
MGI SNP Detail
Chr3:41042975 Tssr28989 1478 bp upstream
SNP C/T C C C C C C T C C C C C T C C
rs227919444
MGI SNP Detail
Chr3:41043125 Tssr28989 1328 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs6392984
MGI SNP Detail
Chr3:41043179 Tssr28989 1274 bp upstream
SNP C/T C T
rs6393052
MGI SNP Detail
Chr3:41043205 Tssr28989 1248 bp upstream
SNP G/T G T
rs232861067
MGI SNP Detail
Chr3:41043231 Tssr28989 1222 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C C C C C C C A C C C C C C C C C C C C C
rs583827862
MGI SNP Detail
Chr3:41043343 Tssr28989 1110 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs254165185
MGI SNP Detail
Chr3:41043363 Tssr28989 1090 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs212032080
MGI SNP Detail
Chr3:41043367 Tssr28989 1086 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G G G G G G A G G G G G G G G G G G G G G
rs238886217
MGI SNP Detail
Chr3:41043437 Tssr28989 1016 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G G G G G G A G G G G G G G G G G G G G G
rs249589877
MGI SNP Detail
Chr3:41043477 Tssr28989 976 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G G G G G G A G G G G G G G G G G G G G G
rs215843844
MGI SNP Detail
Chr3:41043510 Tssr28989 943 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs45766460
MGI SNP Detail
Chr3:41043564 Tssr28989 889 bp upstream
SNP A/G G G G G G G G G G G G G G A G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251432811
MGI SNP Detail
Chr3:41043576 Tssr28989 877 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs587254550
MGI SNP Detail
Chr3:41043665 Tssr28989 788 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581088003
MGI SNP Detail
Chr3:41043737 Tssr28989 716 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T T T T T T A T A T T T T T T T A T T T T
rs51437854
MGI SNP Detail
Chr3:41043903 Tssr28989 550 bp upstream
SNP A/G G G G G G G A G G G A G A G G
rs247536748
MGI SNP Detail
Chr3:41043911 Tssr28989 542 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs261744151
MGI SNP Detail
Chr3:41044012 Tssr28989 441 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220950357
MGI SNP Detail
Chr3:41044089 Tssr28989 364 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239962067
MGI SNP Detail
Chr3:41044110 Tssr28989 343 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs50083418
MGI SNP Detail
Chr3:41044185 Tssr28989 268 bp upstream
SNP C/T T T T T T T C T T T C T C C T
rs228266955
MGI SNP Detail
Chr3:41044186 Tssr28989 267 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs49892279
MGI SNP Detail
Chr3:41044237 Tssr28989 216 bp upstream
SNP A/G A A A A A A A A A A A A A G A
rs261125439
MGI SNP Detail
Chr3:41044261 Tssr28989 192 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs233631857
MGI SNP Detail
Chr3:41044445 Tssr28989 8 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs249567729
MGI SNP Detail
Chr3:41044450 Tssr28989 3 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs212161497
MGI SNP Detail
Chr3:41044473 Tssr28989 12 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230860316
MGI SNP Detail
Chr3:41044492 Tssr28989 31 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243832725
MGI SNP Detail
Chr3:41044520 Tssr28989 59 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs215807281
MGI SNP Detail
Chr3:41044548 Tssr28989 87 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs232780027
MGI SNP Detail
Chr3:41044598 Tssr28989 137 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs251361748
MGI SNP Detail
Chr3:41044612 Tssr28989 151 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs51582234
MGI SNP Detail
Chr3:41044624 Tssr28989 163 bp downstream
SNP C/G G G G G G G C G G G G G C G G
rs242146532
MGI SNP Detail
Chr3:41044659 Tssr28989 198 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs256372213
MGI SNP Detail
Chr3:41044710 Tssr28989 249 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A
rs45774460
MGI SNP Detail
Chr3:41044821 Tssr28989 360 bp downstream
SNP A/G A A A A A A G A A A A A G G A
rs233300491
MGI SNP Detail
Chr3:41044864 Tssr28989 403 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs251601763
MGI SNP Detail
Chr3:41044909 Tssr28989 448 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs584498162
MGI SNP Detail
Chr3:41045023 Tssr28989 562 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs222128504
MGI SNP Detail
Chr3:41045024 Tssr28989 563 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs240796407
MGI SNP Detail
Chr3:41045026 Tssr28989 565 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T C T T T T T T T T T T C T T T T T T T T C T T T T
rs266064645
MGI SNP Detail
Chr3:41045142 Tssr28989 681 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs225554723
MGI SNP Detail
Chr3:41045190 Tssr28989 729 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C T C T C C C C C C C C C C C C
rs244589657
MGI SNP Detail
Chr3:41045232 Tssr28989 771 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261234998
MGI SNP Detail
Chr3:41045274 Tssr28989 813 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs230833482
MGI SNP Detail
Chr3:41045321 Tssr28989 860 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs46925620
MGI SNP Detail
Chr3:41045350 Tssr28989 889 bp downstream
SNP A/G G G G G G G G G G G G G A G G
rs243799021
MGI SNP Detail
Chr3:41045352 Tssr28989 891 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs258084728
MGI SNP Detail
Chr3:41045422 Tssr28989 961 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226682694
MGI SNP Detail
Chr3:41045443 Tssr28989 982 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs247334925
MGI SNP Detail
Chr3:41045533 Tssr28989 1072 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs219273388
MGI SNP Detail
Chr3:41045571 Tssr28989 1110 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs239656060
MGI SNP Detail
Chr3:41045766 Tssr28989 1305 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254423760
MGI SNP Detail
Chr3:41045782 Tssr28989 1321 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs212099694
MGI SNP Detail
Chr3:41045795 Tssr28989 1334 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs232991304
MGI SNP Detail
Chr3:41045941 Tssr28989 1480 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs578680403
MGI SNP Detail
Chr3:41046047 Tssr28989 1586 bp downstream
SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs251518382
MGI SNP Detail
Chr3:41046109 Tssr28989 1648 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs222226856
MGI SNP Detail
Chr3:41046131 Tssr28989 1670 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T
rs234231473
MGI SNP Detail
Chr3:41046351 Tssr28989 1890 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261111138
MGI SNP Detail
Chr3:41046418 Tssr28989 1957 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs226551600
MGI SNP Detail
Chr3:41046452 Tssr28989 1991 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G A G A G G G G G G G A G G G G
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Showing SNP(s) 1 - 75 of 75

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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory