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Mouse SNP Summary
Symbol
Name
ID 		Tssr29852
transcription start site region 29852
MGI:5957619

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Showing SNP(s) 1 - 51 of 51

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs241053411
MGI SNP Detail		 Chr3:87820545 Hdgf within coordinates of
Tssr29852 1843 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs258974316
MGI SNP Detail		 Chr3:87820719 Hdgf within coordinates of
Tssr29852 1669 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs578329692
MGI SNP Detail		 Chr3:87820737 Hdgf within coordinates of
Tssr29852 1651 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs220122451
MGI SNP Detail		 Chr3:87820841 Hdgf within coordinates of
Tssr29852 1547 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs238717500
MGI SNP Detail		 Chr3:87820846 Hdgf within coordinates of
Tssr29852 1542 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261954695
MGI SNP Detail		 Chr3:87820873 Hdgf within coordinates of
Tssr29852 1515 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs228092202
MGI SNP Detail		 Chr3:87820893 Hdgf within coordinates of
Tssr29852 1495 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs30998491
MGI SNP Detail		 Chr3:87821391 Hdgf within coordinates of
Tssr29852 997 bp upstream
 SNP C/T C C T T T
rs266152822
MGI SNP Detail		 Chr3:87821565 Hdgf within coordinates of
Tssr29852 823 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs228659936
MGI SNP Detail		 Chr3:87821586 Hdgf within coordinates of
Tssr29852 802 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G C G G G G G C G G G G G G G G G G G G G G C G G G G
rs246107343
MGI SNP Detail		 Chr3:87821608 Hdgf within coordinates of
Tssr29852 780 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs215351947
MGI SNP Detail		 Chr3:87821617 Hdgf within coordinates of
Tssr29852 771 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232421454
MGI SNP Detail		 Chr3:87821647 Hdgf within coordinates of
Tssr29852 741 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255583220
MGI SNP Detail		 Chr3:87821935 Hdgf within coordinates of
Tssr29852 453 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A A G A A A A A A A A A A A A A A A A A A
rs213266678
MGI SNP Detail		 Chr3:87822039 Hdgf within coordinates of
Tssr29852 349 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs236670276
MGI SNP Detail		 Chr3:87822061 Hdgf within coordinates of
Tssr29852 327 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs260651786
MGI SNP Detail		 Chr3:87822159 Hdgf within coordinates of
Tssr29852 229 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs222279967
MGI SNP Detail		 Chr3:87822169 Hdgf within coordinates of
Tssr29852 219 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs31601458
MGI SNP Detail		 Chr3:87822402 Hdgf within coordinates of
Tssr29852 within coordinates of
 SNP C/T C T C C T
rs252619244
MGI SNP Detail		 Chr3:87822775 Hdgf within coordinates of
Tssr29852 373 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs220060800
MGI SNP Detail		 Chr3:87822916 Hdgf within coordinates of
Tssr29852 514 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs243024500
MGI SNP Detail		 Chr3:87823068 Hdgf within coordinates of
Tssr29852 666 bp downstream
Tssr29860 within coordinates of
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264824295
MGI SNP Detail		 Chr3:87823081 Hdgf within coordinates of
Tssr29852 679 bp downstream
Tssr29860 within coordinates of
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs220396105
MGI SNP Detail		 Chr3:87823090 Hdgf within coordinates of
Tssr29852 688 bp downstream
Tssr29860 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251194436
MGI SNP Detail		 Chr3:87823161 Hdgf within coordinates of
Tssr29852 759 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31156804
MGI SNP Detail		 Chr3:87823180 Hdgf within coordinates of
Tssr29852 778 bp downstream
 SNP A/G G G G A A A
rs228587820
MGI SNP Detail		 Chr3:87823258 Hdgf within coordinates of
Tssr29852 856 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249934351
MGI SNP Detail		 Chr3:87823323 Hdgf within coordinates of
Tssr29852 921 bp downstream
 SNP T T T
rs30400311
MGI SNP Detail		 Chr3:87823424 Hdgf within coordinates of
Tssr29852 1022 bp downstream
 SNP C/T C C T T C T T T T T T T T T T
rs226241081
MGI SNP Detail		 Chr3:87823517 Tssr29852 1115 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250995378
MGI SNP Detail		 Chr3:87823534 Tssr29852 1132 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213562558
MGI SNP Detail		 Chr3:87823597 Tssr29852 1195 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs235052905
MGI SNP Detail		 Chr3:87823653 Tssr29852 1251 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs30312341
MGI SNP Detail		 Chr3:87823664 Tssr29852 1262 bp downstream
 SNP C/T C T T T T
rs30054578
MGI SNP Detail		 Chr3:87823791 Tssr29852 1389 bp downstream
 SNP C/G C C G G G
rs234496640
MGI SNP Detail		 Chr3:87823811 Tssr29852 1409 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252481162
MGI SNP Detail		 Chr3:87823812 Tssr29852 1410 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30552749
MGI SNP Detail		 Chr3:87823914 Tssr29852 1512 bp downstream
 SNP A/T T A A T T A T A A T T
rs237733541
MGI SNP Detail		 Chr3:87823925 Tssr29852 1523 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs585677982
MGI SNP Detail		 Chr3:87824001 Tssr29852 1599 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs38507773
MGI SNP Detail		 Chr3:87824018 Tssr29852 1616 bp downstream
 SNP A/G G G G G G G G G A G
rs219897215
MGI SNP Detail		 Chr3:87824055 Tssr29852 1653 bp downstream
 SNP A/C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G C
rs36286509
MGI SNP Detail		 Chr3:87824117 Tssr29852 1715 bp downstream
 SNP C/G C C G C C C C C C
rs36789786
MGI SNP Detail		 Chr3:87824143 Tssr29852 1741 bp downstream
 SNP A/G G G A G G G G G
rs31428828
MGI SNP Detail		 Chr3:87824159 Tssr29852 1757 bp downstream
 SNP C/G G C C G G G C G C G G
rs240142538
MGI SNP Detail		 Chr3:87824209 Tssr29852 1807 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257276417
MGI SNP Detail		 Chr3:87824221 Tssr29852 1819 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231093435
MGI SNP Detail		 Chr3:87824224 Tssr29852 1822 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246110280
MGI SNP Detail		 Chr3:87824257 Tssr29852 1855 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs38090138
MGI SNP Detail		 Chr3:87824288 Tssr29852 1886 bp downstream
 SNP C/G C C G C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228666518
MGI SNP Detail		 Chr3:87824302 Tssr29852 1900 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 51 of 51
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory