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Mouse SNP Summary
Symbol
Name
ID 		Tssr29862
transcription start site region 29862
MGI:5957629

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Showing SNP(s) 1 - 69 of 69

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs217037699
MGI SNP Detail		 Chr3:87824842 Tssr29862 1955 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs228301666
MGI SNP Detail		 Chr3:87824876 Tssr29862 1921 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs246171917
MGI SNP Detail		 Chr3:87824889 Tssr29862 1908 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G G G G G G G G G G G G G G T G G G G G G G T G G G G
rs214058940
MGI SNP Detail		 Chr3:87824920 Tssr29862 1877 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs587374613
MGI SNP Detail		 Chr3:87824967 Tssr29862 1830 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T C C C C C C C C C C C C C C T C C C C
rs235976822
MGI SNP Detail		 Chr3:87825019 Tssr29862 1778 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T A T T T T T A T T T T T T A T T T T T T T T T T T T
rs261403410
MGI SNP Detail		 Chr3:87825025 Tssr29862 1772 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs211840476
MGI SNP Detail		 Chr3:87825036 Tssr29862 1761 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs242938078
MGI SNP Detail		 Chr3:87825052 Tssr29862 1745 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs252530390
MGI SNP Detail		 Chr3:87825059 Tssr29862 1738 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs221427338
MGI SNP Detail		 Chr3:87825069 Tssr29862 1728 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30559826
MGI SNP Detail		 Chr3:87825152 Tssr29862 1645 bp upstream
 SNP A/T A A T T T
rs251301681
MGI SNP Detail		 Chr3:87825153 Tssr29862 1644 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs223183164
MGI SNP Detail		 Chr3:87825225 Tssr29862 1572 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs31596864
MGI SNP Detail		 Chr3:87825234 Tssr29862 1563 bp upstream
 SNP A/C C A A A A
rs264918815
MGI SNP Detail		 Chr3:87825239 Tssr29862 1558 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs227853659
MGI SNP Detail		 Chr3:87825299 Tssr29862 1498 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs580624467
MGI SNP Detail		 Chr3:87825349 Tssr29862 1448 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs243053807
MGI SNP Detail		 Chr3:87825448 Tssr29862 1349 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs260825112
MGI SNP Detail		 Chr3:87825466 Tssr29862 1331 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228321871
MGI SNP Detail		 Chr3:87825469 Tssr29862 1328 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs246828727
MGI SNP Detail		 Chr3:87825501 Tssr29862 1296 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs583122111
MGI SNP Detail		 Chr3:87825530 Tssr29862 1267 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214755948
MGI SNP Detail		 Chr3:87825558 Tssr29862 1239 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs580799532
MGI SNP Detail		 Chr3:87825585 Tssr29862 1212 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs584561387
MGI SNP Detail		 Chr3:87825588 Tssr29862 1209 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs229876511
MGI SNP Detail		 Chr3:87825616 Tssr29862 1181 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36450108
MGI SNP Detail		 Chr3:87825618 Tssr29862 1179 bp upstream
 SNP A/T A A A A T T A A A
rs249548437
MGI SNP Detail		 Chr3:87825694 Tssr29862 1103 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs211960290
MGI SNP Detail		 Chr3:87825698 Tssr29862 1099 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240047014
MGI SNP Detail		 Chr3:87825755 Gm64606 within coordinates of
Tssr29862 1042 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs252561785
MGI SNP Detail		 Chr3:87825771 Gm64606 within coordinates of
Tssr29862 1026 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G T G G G G G G G G G G G G G G T G G G G
rs215761687
MGI SNP Detail		 Chr3:87825808 Gm64606 within coordinates of
Tssr29862 989 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T C C C C C C C C C C C C C C T C C C C
rs232838250
MGI SNP Detail		 Chr3:87825881 Gm64606 within coordinates of
Tssr29862 916 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs250495522
MGI SNP Detail		 Chr3:87826000 Gm64606 within coordinates of
Tssr29862 797 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs222546245
MGI SNP Detail		 Chr3:87826047 Gm64606 within coordinates of
Tssr29862 750 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs238197220
MGI SNP Detail		 Chr3:87826048 Gm64606 within coordinates of
Tssr29862 749 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A T A A A A A A A A A A A A A A T A A A A
rs29965627
MGI SNP Detail		 Chr3:87826129 Gm64606 within coordinates of
Tssr29862 668 bp upstream
 SNP A/G A A G A G G G
rs220338497
MGI SNP Detail		 Chr3:87826286 Gm64606 within coordinates of
Tssr29862 511 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs242905789
MGI SNP Detail		 Chr3:87826350 Gm64606 within coordinates of
Tssr29862 447 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs260855648
MGI SNP Detail		 Chr3:87826351 Gm64606 within coordinates of
Tssr29862 446 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs31088480
MGI SNP Detail		 Chr3:87826560 Gm64606 within coordinates of
Rr367453 within coordinates of
Tssr29862 237 bp upstream
 SNP A/C A A C A C C C
rs222175802
MGI SNP Detail		 Chr3:87826774 Cpgi13346 within coordinates of
Rr367453 within coordinates of
Tssr29862 23 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240787467
MGI SNP Detail		 Chr3:87826849 Cpgi13346 within coordinates of
Mrpl24 within coordinates of
Rr367453 within coordinates of
Tssr29862 45 bp downstream
Tssr29864 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs265398273
MGI SNP Detail		 Chr3:87826866 Cpgi13346 within coordinates of
Mrpl24 within coordinates of
Tssr29862 62 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs13466724
MGI SNP Detail		 Chr3:87826936 Cpgi13346 within coordinates of
Mrpl24 within coordinates of
Tssr29862 132 bp downstream
 SNP A/T T T A A T A A A A T A A T
rs253609237
MGI SNP Detail		 Chr3:87827147 Cpgi13346 within coordinates of
Mrpl24 within coordinates of
Tssr29862 343 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs261230161
MGI SNP Detail		 Chr3:87827249 Mrpl24 within coordinates of
Tssr29862 445 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229032733
MGI SNP Detail		 Chr3:87827326 Mrpl24 within coordinates of
Tssr29862 522 bp downstream
 SNP A/C C A A C C A A A A C A A C A C C A A C A A C C C C A C A C
rs36859727
MGI SNP Detail		 Chr3:87827357 Mrpl24 within coordinates of
Tssr29862 553 bp downstream
 SNP C/G C G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs36596608
MGI SNP Detail		 Chr3:87827364 Mrpl24 within coordinates of
Tssr29862 560 bp downstream
 SNP A/G A G G G G G G G A
rs39108325
MGI SNP Detail		 Chr3:87827392 Mrpl24 within coordinates of
Tssr29862 588 bp downstream
 SNP A/C C A A A A A A C
rs232783081
MGI SNP Detail		 Chr3:87827481 Mrpl24 within coordinates of
Tssr29862 677 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs244435214
MGI SNP Detail		 Chr3:87827682 Mrpl24 within coordinates of
Tssr29862 878 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs235404813
MGI SNP Detail		 Chr3:87828090 Mrpl24 within coordinates of
Tssr29862 1286 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs261618208
MGI SNP Detail		 Chr3:87828130 Mrpl24 within coordinates of
Tssr29862 1326 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A
rs220446526
MGI SNP Detail		 Chr3:87828213 Mrpl24 within coordinates of
Tssr29862 1409 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs236452278
MGI SNP Detail		 Chr3:87828331 Mrpl24 within coordinates of
Tssr29862 1527 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs254656334
MGI SNP Detail		 Chr3:87828339 Mrpl24 within coordinates of
Tssr29862 1535 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs222029408
MGI SNP Detail		 Chr3:87828341 Mrpl24 within coordinates of
Tssr29862 1537 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs240821260
MGI SNP Detail		 Chr3:87828545 Mrpl24 within coordinates of
Tssr29862 1741 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs262895563
MGI SNP Detail		 Chr3:87828608 Mrpl24 within coordinates of
Tssr29862 1804 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs37676066
MGI SNP Detail		 Chr3:87828621 Mrpl24 within coordinates of
Tssr29862 1817 bp downstream
 SNP C/T T T C T T C T C T
rs242559293
MGI SNP Detail		 Chr3:87828695 Mrpl24 within coordinates of
Tssr29862 1891 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264493923
MGI SNP Detail		 Chr3:87828714 Mrpl24 within coordinates of
Tssr29862 1910 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231875208
MGI SNP Detail		 Chr3:87828728 Mrpl24 within coordinates of
Tssr29862 1924 bp downstream
 SNP A/G G A
rs256142200
MGI SNP Detail		 Chr3:87828766 Mrpl24 within coordinates of
Tssr29862 1962 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs213585195
MGI SNP Detail		 Chr3:87828789 Mrpl24 within coordinates of
Tssr29862 1985 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs237242702
MGI SNP Detail		 Chr3:87828796 Mrpl24 within coordinates of
Tssr29862 1992 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
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Showing SNP(s) 1 - 69 of 69
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory