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Mouse SNP Summary
Symbol
Name
ID 		Tssr29937
transcription start site region 29937
MGI:5957704

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Showing SNP(s) 1 - 49 of 49

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs579957008
MGI SNP Detail		 Chr3:88202640 Tsacc within coordinates of
Tssr29937 1863 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs583441898
MGI SNP Detail		 Chr3:88202651 Tsacc within coordinates of
Tssr29937 1852 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs586126822
MGI SNP Detail		 Chr3:88202679 Tsacc within coordinates of
Tssr29937 1824 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs254024683
MGI SNP Detail		 Chr3:88202788 Tsacc within coordinates of
Tssr29937 1715 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs223008969
MGI SNP Detail		 Chr3:88202805 Tsacc within coordinates of
Tssr29937 1698 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247734668
MGI SNP Detail		 Chr3:88202820 Tsacc within coordinates of
Tssr29937 1683 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T
rs265814893
MGI SNP Detail		 Chr3:88202821 Tsacc within coordinates of
Tssr29937 1682 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs231986581
MGI SNP Detail		 Chr3:88202842 Tsacc within coordinates of
Tssr29937 1661 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G G A A A A A A G A A G G A A A G A A A G
rs255907939
MGI SNP Detail		 Chr3:88203162 Tsacc within coordinates of
Tssr29937 1341 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T C T T T T T T T C T T T C T T T T T T T C
rs257212028
MGI SNP Detail		 Chr3:88203186 Tsacc within coordinates of
Tssr29937 1317 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs32883291
MGI SNP Detail		 Chr3:88203292 Tsacc within coordinates of
Tssr29937 1211 bp upstream
 SNP C/T C C C C C T C C T C C
rs243332335
MGI SNP Detail		 Chr3:88203412 Tsacc within coordinates of
Tssr29937 1091 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs217152785
MGI SNP Detail		 Chr3:88203526 Rr579705 within coordinates of
Tsacc within coordinates of
Tssr29937 977 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs235436339
MGI SNP Detail		 Chr3:88203585 Rr579705 within coordinates of
Tsacc within coordinates of
Tssr29937 918 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs253029468
MGI SNP Detail		 Chr3:88203666 Rr579705 within coordinates of
Tsacc within coordinates of
Tssr29937 837 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs216193317
MGI SNP Detail		 Chr3:88203783 Rr579705 within coordinates of
Tsacc within coordinates of
Tssr29937 720 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs236950698
MGI SNP Detail		 Chr3:88203933 Cpgi13369 within coordinates of
Rr579705 within coordinates of
Tsacc within coordinates of
Tssr29937 570 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs262510494
MGI SNP Detail		 Chr3:88203945 Cpgi13369 within coordinates of
Gm65645 within coordinates of
Rr579705 within coordinates of
Tsacc within coordinates of
Tssr29937 558 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs219456117
MGI SNP Detail		 Chr3:88204001 Cpgi13369 within coordinates of
Gm65645 within coordinates of
Rr579706 within coordinates of
Tsacc within coordinates of
Tssr29937 502 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs230766098
MGI SNP Detail		 Chr3:88204291 Cpgi13369 within coordinates of
Rr579707 within coordinates of
Tsacc within coordinates of
Tssr29934 within coordinates of
Tssr29937 212 bp upstream
Tssr34000 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs248334840
MGI SNP Detail		 Chr3:88204292 Cpgi13369 within coordinates of
Rr579707 within coordinates of
Tsacc within coordinates of
Tssr29934 within coordinates of
Tssr29937 211 bp upstream
Tssr34000 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs32884034
MGI SNP Detail		 Chr3:88204374 Cpgi13369 within coordinates of
Rr579707 within coordinates of
Tssr29937 129 bp upstream
 SNP C/T C C C C C C T C C C T C C C
rs250555785
MGI SNP Detail		 Chr3:88204382 Cpgi13369 within coordinates of
Rr579707 within coordinates of
Tssr29937 121 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs259738024
MGI SNP Detail		 Chr3:88204426 Cpgi13369 within coordinates of
Rr579707 within coordinates of
Tssr29935 within coordinates of
Tssr29937 77 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224697808
MGI SNP Detail		 Chr3:88204434 Cpgi13369 within coordinates of
Rr579707 within coordinates of
Tssr29935 within coordinates of
Tssr29937 69 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G T G G G G G G G G G T G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs244635233
MGI SNP Detail		 Chr3:88204449 Cct3 within coordinates of
Cpgi13369 within coordinates of
Rr579707 within coordinates of
Tssr29935 within coordinates of
Tssr29937 54 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257887055
MGI SNP Detail		 Chr3:88204594 Cct3 within coordinates of
Cpgi13369 within coordinates of
Rr579709 within coordinates of
Tssr29937 69 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs224669758
MGI SNP Detail		 Chr3:88204667 Cct3 within coordinates of
Cpgi13369 within coordinates of
Rr579709 within coordinates of
Rr579710 within coordinates of
Tssr29937 142 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236826283
MGI SNP Detail		 Chr3:88204704 Cct3 within coordinates of
Cpgi13369 within coordinates of
Rr579709 within coordinates of
Tssr29937 179 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C
rs32884037
MGI SNP Detail		 Chr3:88204808 Cct3 within coordinates of
Cpgi13369 within coordinates of
Rr579709 within coordinates of
Tssr29937 283 bp downstream
 SNP C/G G G G G G G C G G G C G G C G
rs232908056
MGI SNP Detail		 Chr3:88204974 Cct3 within coordinates of
Cpgi13369 within coordinates of
Rr579709 within coordinates of
Tssr29937 449 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs258126292
MGI SNP Detail		 Chr3:88205007 Cct3 within coordinates of
Cpgi13369 within coordinates of
Rr579709 within coordinates of
Tssr29937 482 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215510783
MGI SNP Detail		 Chr3:88205023 Cct3 within coordinates of
Cpgi13369 within coordinates of
Rr579709 within coordinates of
Tssr29937 498 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs32884040
MGI SNP Detail		 Chr3:88205301 Cct3 within coordinates of
Tssr29937 776 bp downstream
 SNP G/T G G G T T G G T G G
rs243827243
MGI SNP Detail		 Chr3:88205323 Cct3 within coordinates of
Tssr29937 798 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212821255
MGI SNP Detail		 Chr3:88205326 Cct3 within coordinates of
Tssr29937 801 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs32884042
MGI SNP Detail		 Chr3:88205480 Cct3 within coordinates of
Tssr29937 955 bp downstream
 SNP G/T T T T T T G T T T G T T G
rs248226431
MGI SNP Detail		 Chr3:88205546 Cct3 within coordinates of
Tssr29937 1021 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs217455459
MGI SNP Detail		 Chr3:88205696 Cct3 within coordinates of
Tssr29937 1171 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G
rs239662382
MGI SNP Detail		 Chr3:88205734 Cct3 within coordinates of
Tssr29937 1209 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs263432325
MGI SNP Detail		 Chr3:88205746 Cct3 within coordinates of
Tssr29937 1221 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs224468515
MGI SNP Detail		 Chr3:88205798 Cct3 within coordinates of
Tssr29937 1273 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247164037
MGI SNP Detail		 Chr3:88205820 Cct3 within coordinates of
Tssr29937 1295 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251576978
MGI SNP Detail		 Chr3:88205847 Cct3 within coordinates of
Tssr29937 1322 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G
rs219184385
MGI SNP Detail		 Chr3:88206087 Cct3 within coordinates of
Tssr29937 1562 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T C C T T T T T T T T T T C T T T T T T T C
rs236897681
MGI SNP Detail		 Chr3:88206223 Cct3 within coordinates of
Tssr29937 1698 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs580248402
MGI SNP Detail		 Chr3:88206313 Cct3 within coordinates of
Tssr29937 1788 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G G G G G G G
rs583962384
MGI SNP Detail		 Chr3:88206322 Cct3 within coordinates of
Tssr29937 1797 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs261012192
MGI SNP Detail		 Chr3:88206383 Cct3 within coordinates of
Tssr29937 1858 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
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Showing SNP(s) 1 - 49 of 49
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory