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Mouse SNP Summary
Symbol
Name
ID 		Tssr31061
transcription start site region 31061
MGI:5958828

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Showing SNP(s) 1 - 61 of 61

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219795371
MGI SNP Detail		 Chr3:104699483 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 1915 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs243825342
MGI SNP Detail		 Chr3:104699511 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 1887 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs51461908
MGI SNP Detail		 Chr3:104699687 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 1711 bp upstream
 SNP C/T C C C C C C C C C C C C C T C
rs232042436
MGI SNP Detail		 Chr3:104699856 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 1542 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A G G A G A A A A A A G A A A A
rs246499709
MGI SNP Detail		 Chr3:104699870 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 1528 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs46152358
MGI SNP Detail		 Chr3:104699922 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 1476 bp upstream
 SNP C/T C C C C C C C C C C T C T C
rs228494438
MGI SNP Detail		 Chr3:104700032 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 1366 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs45902837
MGI SNP Detail		 Chr3:104700036 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 1362 bp upstream
 SNP C/T T T T T T T C T T T C T C C T
rs211903070
MGI SNP Detail		 Chr3:104700073 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 1325 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs239208011
MGI SNP Detail		 Chr3:104700083 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 1315 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs250843144
MGI SNP Detail		 Chr3:104700118 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 1280 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs51064033
MGI SNP Detail		 Chr3:104700417 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 981 bp upstream
 SNP A/G G G G G G G G G G G A G A A G
rs217262114
MGI SNP Detail		 Chr3:104700452 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 946 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232920393
MGI SNP Detail		 Chr3:104700505 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 893 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs253556911
MGI SNP Detail		 Chr3:104700507 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 891 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A T T A T A A A A A A A A A A A A
rs222261645
MGI SNP Detail		 Chr3:104700593 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 805 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs230988384
MGI SNP Detail		 Chr3:104700602 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 796 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs47521200
MGI SNP Detail		 Chr3:104700689 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 709 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223728571
MGI SNP Detail		 Chr3:104700744 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 654 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs246612086
MGI SNP Detail		 Chr3:104700760 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 638 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs262253661
MGI SNP Detail		 Chr3:104700802 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 596 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs221524250
MGI SNP Detail		 Chr3:104700855 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 543 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs580857954
MGI SNP Detail		 Chr3:104700889 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 509 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs240178955
MGI SNP Detail		 Chr3:104700912 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 486 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261270996
MGI SNP Detail		 Chr3:104700938 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 460 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228542532
MGI SNP Detail		 Chr3:104700958 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 440 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs238001588
MGI SNP Detail		 Chr3:104701000 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 398 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs216913066
MGI SNP Detail		 Chr3:104701126 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 272 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226927826
MGI SNP Detail		 Chr3:104701127 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 271 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs247494163
MGI SNP Detail		 Chr3:104701182 Gm66976 within coordinates of
Rhoc within coordinates of
Tssr31061 216 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs13463422
MGI SNP Detail		 Chr3:104701215 Gm66976 within coordinates of
Rhoc within coordinates of
Rr77010 within coordinates of
Tssr31061 183 bp upstream
 SNP C/T C C C C C C C C C C T C T T C
rs231060808
MGI SNP Detail		 Chr3:104701367 Gm66976 within coordinates of
Rhoc within coordinates of
Rr77010 within coordinates of
Tssr31061 31 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs255809168
MGI SNP Detail		 Chr3:104701399 Gm66976 within coordinates of
Rhoc within coordinates of
Rr77010 within coordinates of
Tssr31061 within coordinates of
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C A C C C A A C A C C C C C C C A C C C C
rs215554301
MGI SNP Detail		 Chr3:104701457 Gm66976 within coordinates of
Rhoc within coordinates of
Rr77010 within coordinates of
Tssr31061 31 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C G C C C C C G C C C G G C G C C C C C C C C C C C C
rs236456227
MGI SNP Detail		 Chr3:104701586 Gm66976 within coordinates of
Rhoc within coordinates of
Rr77010 within coordinates of
Tssr31061 160 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs261905998
MGI SNP Detail		 Chr3:104701590 Gm66976 within coordinates of
Rhoc within coordinates of
Rr77010 within coordinates of
Tssr31061 164 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs221558501
MGI SNP Detail		 Chr3:104701779 Gm66976 within coordinates of
Rr77010 within coordinates of
Tssr31061 353 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs240267803
MGI SNP Detail		 Chr3:104701909 Rr77010 within coordinates of
Tssr31061 483 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A G G G A A G A G G G G G G G G G G G
rs254944451
MGI SNP Detail		 Chr3:104701952 Rr77010 within coordinates of
Tssr31061 526 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs222286954
MGI SNP Detail		 Chr3:104701982 Rr77010 within coordinates of
Tssr31061 556 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs245005094
MGI SNP Detail		 Chr3:104702006 Rr77010 within coordinates of
Tssr31061 580 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261483307
MGI SNP Detail		 Chr3:104702053 Rr77010 within coordinates of
Tssr31061 627 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs231072009
MGI SNP Detail		 Chr3:104702082 Rr77010 within coordinates of
Tssr31061 656 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48622638
MGI SNP Detail		 Chr3:104702138 Rr77010 within coordinates of
Tssr31061 712 bp downstream
 SNP C/T C T C C C C C T C T T C
rs258321386
MGI SNP Detail		 Chr3:104702190 Mov10 within coordinates of
Rr77010 within coordinates of
Tssr31061 764 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G C G G G C C G C G G G G G G G C G G G G
rs227013245
MGI SNP Detail		 Chr3:104702258 Mov10 within coordinates of
Tssr31061 832 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T
rs586994849
MGI SNP Detail		 Chr3:104702548 Mov10 within coordinates of
Tssr31061 1122 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247585734
MGI SNP Detail		 Chr3:104702627 Mov10 within coordinates of
Tssr31061 1201 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs216747269
MGI SNP Detail		 Chr3:104702735 Mov10 within coordinates of
Tssr31061 1309 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs224465836
MGI SNP Detail		 Chr3:104702738 Mov10 within coordinates of
Tssr31061 1312 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs253457584
MGI SNP Detail		 Chr3:104702794 Mov10 within coordinates of
Tssr31061 1368 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G A A G A G G G G G G G A G G G G
rs215170879
MGI SNP Detail		 Chr3:104702822 Mov10 within coordinates of
Tssr31061 1396 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs238474817
MGI SNP Detail		 Chr3:104702863 Mov10 within coordinates of
Tssr31061 1437 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259758130
MGI SNP Detail		 Chr3:104702955 Mov10 within coordinates of
Tssr31061 1529 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs215410250
MGI SNP Detail		 Chr3:104702971 Mov10 within coordinates of
Tssr31061 1545 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C T T C T C C C C C C C T C C C C
rs49210592
MGI SNP Detail		 Chr3:104703115 Mov10 within coordinates of
Tssr31061 1689 bp downstream
 SNP A/G G G G G G G G G G G A G A G
rs254986614
MGI SNP Detail		 Chr3:104703150 Mov10 within coordinates of
Tssr31061 1724 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222392546
MGI SNP Detail		 Chr3:104703172 Mov10 within coordinates of
Tssr31061 1746 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs241760184
MGI SNP Detail		 Chr3:104703197 Mov10 within coordinates of
Tssr31061 1771 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs260902729
MGI SNP Detail		 Chr3:104703314 Mov10 within coordinates of
Tssr31061 1888 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs223341355
MGI SNP Detail		 Chr3:104703376 Mov10 within coordinates of
Tssr31061 1950 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
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Showing SNP(s) 1 - 61 of 61
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory