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Mouse SNP Summary
Symbol
Name
ID 		Tssr32858
transcription start site region 32858
MGI:5960625

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Showing SNP(s) 1 - 62 of 62

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs259796685
MGI SNP Detail		 Chr3:27763392 Fndc3b within coordinates of
Rr77460 within coordinates of
Tssr32858 1990 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs221092079
MGI SNP Detail		 Chr3:27763426 Fndc3b within coordinates of
Rr77460 within coordinates of
Tssr32858 1956 bp downstream
 SNP C/G/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C G C C C C
rs232351497
MGI SNP Detail		 Chr3:27763434 Fndc3b within coordinates of
Rr77460 within coordinates of
Tssr32858 1948 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249996182
MGI SNP Detail		 Chr3:27763453 Fndc3b within coordinates of
Rr77460 within coordinates of
Tssr32858 1929 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C A C C C C
rs218807007
MGI SNP Detail		 Chr3:27763464 Fndc3b within coordinates of
Rr77460 within coordinates of
Tssr32858 1918 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs241461202
MGI SNP Detail		 Chr3:27763529 Fndc3b within coordinates of
Rr77460 within coordinates of
Tssr32858 1853 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs264255633
MGI SNP Detail		 Chr3:27763556 Fndc3b within coordinates of
Rr77460 within coordinates of
Tssr32858 1826 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs225867466
MGI SNP Detail		 Chr3:27763595 Fndc3b within coordinates of
Rr77460 within coordinates of
Tssr32858 1787 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249213584
MGI SNP Detail		 Chr3:27763612 Fndc3b within coordinates of
Rr77460 within coordinates of
Tssr32858 1770 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263140150
MGI SNP Detail		 Chr3:27763873 Fndc3b within coordinates of
Rr77460 within coordinates of
Tssr32858 1509 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs48247434
MGI SNP Detail		 Chr3:27764041 Cpgi13022 within coordinates of
Fndc3b within coordinates of
Rr77460 within coordinates of
Tssr32858 1341 bp downstream
 SNP C/T C T C C
rs238690402
MGI SNP Detail		 Chr3:27764132 Cpgi13022 within coordinates of
Fndc3b within coordinates of
Rr77460 within coordinates of
Tssr32858 1250 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T
rs256695521
MGI SNP Detail		 Chr3:27764259 Cpgi13022 within coordinates of
Fndc3b within coordinates of
Rr77460 within coordinates of
Tssr32858 1123 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C A C C C C C C C C C C C C
rs583011509
MGI SNP Detail		 Chr3:27764286 Cpgi13022 within coordinates of
Fndc3b within coordinates of
Rr77460 within coordinates of
Tssr32858 1096 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs223990868
MGI SNP Detail		 Chr3:27764470 Cpgi13022 within coordinates of
Fndc3b within coordinates of
Rr77460 within coordinates of
Tssr32858 912 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C A C C C A C C C C C C C C C A C C C C C C C C C C C C
rs254534805
MGI SNP Detail		 Chr3:27764812 Cpgi13022 within coordinates of
Fndc3b within coordinates of
Rr77460 within coordinates of
Tssr32858 570 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A C A A A A A A C A A A A A A A C A A A
rs217838470
MGI SNP Detail		 Chr3:27764827 Cpgi13022 within coordinates of
Fndc3b within coordinates of
Rr77460 within coordinates of
Tssr32858 555 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs232043501
MGI SNP Detail		 Chr3:27764833 Cpgi13022 within coordinates of
Fndc3b within coordinates of
Rr77460 within coordinates of
Tssr32858 549 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A
rs256876607
MGI SNP Detail		 Chr3:27765030 Cpgi13022 within coordinates of
Fndc3b within coordinates of
Rr77460 within coordinates of
Tssr32858 352 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs215520154
MGI SNP Detail		 Chr3:27765031 Cpgi13022 within coordinates of
Fndc3b within coordinates of
Rr77460 within coordinates of
Tssr32858 351 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A G A A A A A A G A A A A A A A G A A A A
rs232504356
MGI SNP Detail		 Chr3:27765034 Cpgi13022 within coordinates of
Fndc3b within coordinates of
Rr77460 within coordinates of
Tssr32858 348 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs249957743
MGI SNP Detail		 Chr3:27765052 Cpgi13022 within coordinates of
Fndc3b within coordinates of
Rr77460 within coordinates of
Tssr32858 330 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T C T T T T T T C T T T T T T T C T T T T
rs213212016
MGI SNP Detail		 Chr3:27765166 Cpgi13022 within coordinates of
Fndc3b within coordinates of
Rr77460 within coordinates of
Tssr32858 216 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs586794043
MGI SNP Detail		 Chr3:27765239 Cpgi13022 within coordinates of
Fndc3b within coordinates of
Rr77460 within coordinates of
Tssr32858 143 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236465822
MGI SNP Detail		 Chr3:27765543 Cpgi13022 within coordinates of
Rr77460 within coordinates of
Tssr32858 146 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs260987853
MGI SNP Detail		 Chr3:27765596 Cpgi13022 within coordinates of
Rr77460 within coordinates of
Tssr32858 199 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs226396263
MGI SNP Detail		 Chr3:27765599 Cpgi13022 within coordinates of
Rr77460 within coordinates of
Tssr32858 202 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246471202
MGI SNP Detail		 Chr3:27765614 Cpgi13022 within coordinates of
Rr77460 within coordinates of
Tssr32858 217 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs252931693
MGI SNP Detail		 Chr3:27765702 Cpgi13022 within coordinates of
Rr77460 within coordinates of
Tssr32858 305 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs220244198
MGI SNP Detail		 Chr3:27765778 Rr77460 within coordinates of
Tssr32858 381 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs238864691
MGI SNP Detail		 Chr3:27765844 Tssr32858 447 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs256652471
MGI SNP Detail		 Chr3:27765868 Tssr32858 471 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs227468728
MGI SNP Detail		 Chr3:27765909 Tssr32858 512 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251108839
MGI SNP Detail		 Chr3:27765948 Tssr32858 551 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs263895290
MGI SNP Detail		 Chr3:27765956 Tssr32858 559 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs580889991
MGI SNP Detail		 Chr3:27765987 Tssr32858 590 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs232834546
MGI SNP Detail		 Chr3:27766071 Tssr32858 674 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251943724
MGI SNP Detail		 Chr3:27766128 Tssr32858 731 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs214117843
MGI SNP Detail		 Chr3:27766175 Tssr32858 778 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226440775
MGI SNP Detail		 Chr3:27766199 Tssr32858 802 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs244215343
MGI SNP Detail		 Chr3:27766256 Tssr32858 859 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213264661
MGI SNP Detail		 Chr3:27766399 Tssr32858 1002 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs234903687
MGI SNP Detail		 Chr3:27766479 Tssr32858 1082 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs264383030
MGI SNP Detail		 Chr3:27766527 Tssr32858 1130 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218234688
MGI SNP Detail		 Chr3:27766545 Tssr32858 1148 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs241348067
MGI SNP Detail		 Chr3:27766691 Tssr32858 1294 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252888606
MGI SNP Detail		 Chr3:27766692 Tssr32858 1295 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs220394908
MGI SNP Detail		 Chr3:27766724 Tssr32858 1327 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs231851330
MGI SNP Detail		 Chr3:27766756 Tssr32858 1359 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs250358232
MGI SNP Detail		 Chr3:27766788 Tssr32858 1391 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs48783000
MGI SNP Detail		 Chr3:27766794 Tssr32858 1397 bp upstream
 SNP A A A
rs248182622
MGI SNP Detail		 Chr3:27766807 Tssr32858 1410 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs265901116
MGI SNP Detail		 Chr3:27766839 Tssr32858 1442 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224738542
MGI SNP Detail		 Chr3:27766853 Tssr32858 1456 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs239050622
MGI SNP Detail		 Chr3:27766926 Tssr32858 1529 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255914092
MGI SNP Detail		 Chr3:27767021 Tssr32858 1624 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C C C C C C C C C C C C C
rs224878287
MGI SNP Detail		 Chr3:27767025 Tssr32858 1628 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs242763831
MGI SNP Detail		 Chr3:27767089 Tssr32858 1692 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs254938399
MGI SNP Detail		 Chr3:27767202 Tssr32858 1805 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs228751972
MGI SNP Detail		 Chr3:27767211 Tssr32858 1814 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs254957787
MGI SNP Detail		 Chr3:27767292 Tssr32858 1895 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs218478871
MGI SNP Detail		 Chr3:27767328 Tssr32858 1931 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 62 of 62
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory