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Mouse SNP Summary
Symbol
Name
ID 		Tssr33800
transcription start site region 33800
MGI:5961567

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs250093006
MGI SNP Detail
Alliance Variant		 Chr3:82936424 Fga Coding-Synonymous
Rr375250 within coordinates of
Tssr29665 within coordinates of
Tssr33800 1985 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs264394142
MGI SNP Detail
Alliance Variant		 Chr3:82936437 Fga Coding-NonSynonymous
Rr375250 within coordinates of
Tssr29665 within coordinates of
Tssr33800 1972 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227996177
MGI SNP Detail
Alliance Variant		 Chr3:82936438 Fga Coding-NonSynonymous
Rr375250 within coordinates of
Tssr29665 within coordinates of
Tssr33800 1971 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs30852088
MGI SNP Detail
Alliance Variant		 Chr3:82936535 Fga Coding-Synonymous
Rr375250 within coordinates of
Tssr33800 1874 bp downstream
 SNP C/T T T T T T T C C T C C T C T C T C
rs255157827
MGI SNP Detail
Alliance Variant		 Chr3:82936593 Fga Intron
Rr375250 within coordinates of
Tssr33800 1816 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs225872190
MGI SNP Detail
Alliance Variant		 Chr3:82936594 Fga Intron
Rr375250 within coordinates of
Tssr33800 1815 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245001589
MGI SNP Detail
Alliance Variant		 Chr3:82936637 Fga Intron
Rr375250 within coordinates of
Tssr33800 1772 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs215623708
MGI SNP Detail
Alliance Variant		 Chr3:82936652 Fga Intron
Rr375250 within coordinates of
Tssr33800 1757 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs232765370
MGI SNP Detail
Alliance Variant		 Chr3:82936670 Fga Intron
Rr375250 within coordinates of
Tssr33800 1739 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T G T T T T T G T T T T T T T T T T T T T T G T T T T
rs259671163
MGI SNP Detail
Alliance Variant		 Chr3:82936779 Fga Intron
Rr375250 within coordinates of
Tssr33800 1630 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A A G A A A A A A A A A A A A A A G A A A A
rs586712834
MGI SNP Detail
Alliance Variant		 Chr3:82936798 Fga Intron
Rr375250 within coordinates of
Tssr33800 1611 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A G A A A A A G A A A A A A A A A A A A A A A A A A A
rs30506946
MGI SNP Detail
Alliance Variant		 Chr3:82936908 Fga Intron
Rr375250 within coordinates of
Tssr33800 1501 bp downstream
 SNP A/C C C C C C C A C C A C A C C C A
rs236608201
MGI SNP Detail
Alliance Variant		 Chr3:82936991 Fga Intron
Rr375250 within coordinates of
Tssr33800 1418 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs256552076
MGI SNP Detail
Alliance Variant		 Chr3:82937013 Fga Intron
Rr375250 within coordinates of
Tssr33800 1396 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213844419
MGI SNP Detail
Alliance Variant		 Chr3:82937070 Fga Intron
Rr375250 within coordinates of
Tssr33800 1339 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C T C C C C C C C C C C C C C C T C C C C
rs233064106
MGI SNP Detail
Alliance Variant		 Chr3:82937118 Fga Intron
Rr375250 within coordinates of
Tssr33800 1291 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs37233341
MGI SNP Detail
Alliance Variant		 Chr3:82937128 Fga Intron
Rr375250 within coordinates of
Tssr33800 1281 bp downstream
 SNP C/T C C C C C C C C C C T C
rs221961667
MGI SNP Detail
Alliance Variant		 Chr3:82937145 Fga Intron
Rr375250 within coordinates of
Tssr33800 1264 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs247479915
MGI SNP Detail
Alliance Variant		 Chr3:82937228 Fga Intron
Rr375250 within coordinates of
Tssr33800 1181 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs264214919
MGI SNP Detail
Alliance Variant		 Chr3:82937264 Fga Intron
Rr375250 within coordinates of
Tssr33800 1145 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220323329
MGI SNP Detail
Alliance Variant		 Chr3:82937280 Fga Intron
Rr375250 within coordinates of
Tssr33800 1129 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C C C C C C G C C C C C C C C C C C C
rs38631855
MGI SNP Detail
Alliance Variant		 Chr3:82937288 Fga Intron
Rr375250 within coordinates of
Tssr33800 1121 bp downstream
 SNP A/C A A A A A C A A A A A A
rs255213590
MGI SNP Detail
Alliance Variant		 Chr3:82937291 Fga Intron
Rr375250 within coordinates of
Tssr33800 1118 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs219909114
MGI SNP Detail
Alliance Variant		 Chr3:82937314 Fga Intron
Rr375250 within coordinates of
Tssr33800 1095 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs36544638
MGI SNP Detail
Alliance Variant		 Chr3:82937358 Fga Intron
Rr375250 within coordinates of
Tssr33800 1051 bp downstream
 SNP A/C C C C C C C C C C C A C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs30251236
MGI SNP Detail
Alliance Variant		 Chr3:82937390 Fga Intron
Rr375250 within coordinates of
Tssr33800 1019 bp downstream
 SNP A/G G G A A A G
rs580688059
MGI SNP Detail
Alliance Variant		 Chr3:82937441 Fga Intron
Rr375250 within coordinates of
Tssr33800 968 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs257810525
MGI SNP Detail
Alliance Variant		 Chr3:82937446 Fga Intron
Rr375250 within coordinates of
Tssr33800 963 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs585247100
MGI SNP Detail
Alliance Variant		 Chr3:82937454 Fga Intron
Rr375250 within coordinates of
Tssr33800 955 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs233679375
MGI SNP Detail
Alliance Variant		 Chr3:82937465 Fga Intron
Rr375250 within coordinates of
Tssr33800 944 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T
rs254347478
MGI SNP Detail
Alliance Variant		 Chr3:82937532 Fga Coding-Synonymous
Rr375250 within coordinates of
Tssr33800 877 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs266253298
MGI SNP Detail
Alliance Variant		 Chr3:82937574 Fga Coding-Synonymous
Rr375250 within coordinates of
Tssr33800 835 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228117544
MGI SNP Detail
Alliance Variant		 Chr3:82937588 Fga Coding-NonSynonymous
Rr375250 within coordinates of
Tssr33800 821 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244574164
MGI SNP Detail
Alliance Variant		 Chr3:82937597 Fga Coding-NonSynonymous
Rr375250 within coordinates of
Tssr29670 within coordinates of
Tssr33800 812 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36290625
MGI SNP Detail
Alliance Variant		 Chr3:82937695 Fga Intron
Rr375250 within coordinates of
Tssr33800 714 bp downstream
 SNP C/T T T T T T T T T T T T C T
rs233152633
MGI SNP Detail
Alliance Variant		 Chr3:82937696 Fga Intron
Rr375250 within coordinates of
Tssr33800 713 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246676865
MGI SNP Detail
Alliance Variant		 Chr3:82937700 Fga Intron
Rr375250 within coordinates of
Tssr33800 709 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs216887998
MGI SNP Detail
Alliance Variant		 Chr3:82937701 Fga Intron
Rr375250 within coordinates of
Tssr33800 708 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T C T T T T
rs37042770
MGI SNP Detail
Alliance Variant		 Chr3:82937768 Fga Intron
Rr375250 within coordinates of
Tssr33800 641 bp downstream
 SNP C/T C C C C C C C C C C C T C
rs37437176
MGI SNP Detail
Alliance Variant		 Chr3:82937769 Fga Intron
Rr375250 within coordinates of
Tssr33800 640 bp downstream
 SNP A/G G G G G G G G G G A G G
rs37121166
MGI SNP Detail
Alliance Variant		 Chr3:82937820 Fga Intron
Rr375250 within coordinates of
Tssr33800 589 bp downstream
 SNP A/G G G G G G G G G G G A G
rs39389481
MGI SNP Detail
Alliance Variant		 Chr3:82937889 Fga Intron
Rr375250 within coordinates of
Tssr33800 520 bp downstream
 SNP C/T C C C C C C C C T T C T C T C T
rs249608796
MGI SNP Detail
Alliance Variant		 Chr3:82937920 Fga Intron
Rr375250 within coordinates of
Tssr33800 489 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs579413990
MGI SNP Detail
Alliance Variant		 Chr3:82937963 Fga Intron
Rr375250 within coordinates of
Tssr33800 446 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs219960217
MGI SNP Detail
Alliance Variant		 Chr3:82938145 Fga Coding-Synonymous
Rr375250 within coordinates of
Tssr29671 within coordinates of
Tssr33800 264 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs36996648
MGI SNP Detail
Alliance Variant		 Chr3:82938273 Fga Coding-NonSynonymous
Rr375250 within coordinates of
Tssr29673 within coordinates of
Tssr33800 136 bp downstream
 SNP C/G C C C C C C C C C C C C G C
rs257877237
MGI SNP Detail
Alliance Variant		 Chr3:82938418 Fga Coding-Synonymous
Rr375250 within coordinates of
Tssr33800 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225520647
MGI SNP Detail
Alliance Variant		 Chr3:82938430 Fga Coding-Synonymous
Rr375250 within coordinates of
Tssr33800 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250800882
MGI SNP Detail
Alliance Variant		 Chr3:82938510 Fga Coding-NonSynonymous
Rr375250 within coordinates of
Tssr29680 within coordinates of
Tssr33800 80 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261247605
MGI SNP Detail
Alliance Variant		 Chr3:82938597 Fga Coding-NonSynonymous
Rr375250 within coordinates of
Tssr33800 167 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228787453
MGI SNP Detail
Alliance Variant		 Chr3:82938619 Fga Coding-Synonymous
Rr375250 within coordinates of
Tssr29681 within coordinates of
Tssr33800 189 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs38844209
MGI SNP Detail
Alliance Variant		 Chr3:82938709 Fga Coding-Synonymous
Rr375250 within coordinates of
Tssr29684 within coordinates of
Tssr33800 279 bp upstream
 SNP A/G A A A A A A A A A G G
rs578270455
MGI SNP Detail
Alliance Variant		 Chr3:82938718 Fga Coding-Synonymous
Rr375250 within coordinates of
Tssr29684 within coordinates of
Tssr33800 288 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs257873206
MGI SNP Detail
Alliance Variant		 Chr3:82938721 Fga Coding-NonSynonymous
Rr375250 within coordinates of
Tssr29684 within coordinates of
Tssr33800 291 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs226857145
MGI SNP Detail
Alliance Variant		 Chr3:82938858 Fga Coding-NonSynonymous
Rr375250 within coordinates of
Tssr33800 428 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs13469856
MGI SNP Detail
Alliance Variant		 Chr3:82938899 Fga Coding-NonSynonymous
Rr375250 within coordinates of
Tssr29687 within coordinates of
Tssr33800 469 bp upstream
Tssr33802 within coordinates of
 SNP A/G G G A A G G G G A G G A G G G G G G
rs38434558
MGI SNP Detail
Alliance Variant		 Chr3:82938913 Fga Coding-Synonymous
Rr375250 within coordinates of
Tssr33800 483 bp upstream
Tssr33802 within coordinates of
 SNP A/G G G G G G G A G G G G G G G G
rs217410282
MGI SNP Detail
Alliance Variant		 Chr3:82938914 Fga Coding-NonSynonymous
Rr375250 within coordinates of
Tssr33800 484 bp upstream
Tssr33802 within coordinates of
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs239643732
MGI SNP Detail
Alliance Variant		 Chr3:82938943 Fga Coding-Synonymous
Rr375250 within coordinates of
Tssr33800 513 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs260332078
MGI SNP Detail
Alliance Variant		 Chr3:82938976 Fga Coding-Synonymous
Rr375250 within coordinates of
Tssr33800 546 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs212097595
MGI SNP Detail
Alliance Variant		 Chr3:82939103 Fga Coding-NonSynonymous
Tssr33800 673 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230752644
MGI SNP Detail
Alliance Variant		 Chr3:82939236 Fga Coding-NonSynonymous
Tssr33800 806 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs249666995
MGI SNP Detail
Alliance Variant		 Chr3:82939246 Fga Coding-Synonymous
Tssr33800 816 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs219999497
MGI SNP Detail
Alliance Variant		 Chr3:82939281 Fga Coding-NonSynonymous
Tssr33800 851 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs232773733
MGI SNP Detail
Alliance Variant		 Chr3:82939345 Fga Intron
Fga mRNA-UTR
Tssr33800 915 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs259301914
MGI SNP Detail
Alliance Variant		 Chr3:82939354 Fga Intron
Fga mRNA-UTR
Tssr33800 924 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs225983233
MGI SNP Detail
Alliance Variant		 Chr3:82939358 Fga Intron
Fga mRNA-UTR
Tssr33800 928 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs37300943
MGI SNP Detail
Alliance Variant		 Chr3:82939385 Fga Intron
Fga mRNA-UTR
Tssr33800 955 bp upstream
 SNP C/G C C C C C C C C C C G C C C C
rs260673840
MGI SNP Detail
Alliance Variant		 Chr3:82939481 Fga Intron
Fga mRNA-UTR
Tssr33800 1051 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs37691321
MGI SNP Detail
Alliance Variant		 Chr3:82939569 Fga Intron
Fga mRNA-UTR
Tssr33800 1139 bp upstream
 SNP C/T C C C C C C T C C C T C C T C
rs238513959
MGI SNP Detail
Alliance Variant		 Chr3:82939578 Fga Intron
Fga mRNA-UTR
Tssr33800 1148 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs257940394
MGI SNP Detail
Alliance Variant		 Chr3:82939629 Fga Intron
Fga mRNA-UTR
Tssr33800 1199 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs226928834
MGI SNP Detail
Alliance Variant		 Chr3:82939636 Fga Intron
Fga mRNA-UTR
Tssr33800 1206 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs240809485
MGI SNP Detail
Alliance Variant		 Chr3:82939638 Fga Intron
Fga mRNA-UTR
Tssr33800 1208 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs263767820
MGI SNP Detail
Alliance Variant		 Chr3:82939719 Fga Intron
Fga mRNA-UTR
Tssr33800 1289 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs234339659
MGI SNP Detail
Alliance Variant		 Chr3:82939746 Fga Intron
Fga mRNA-UTR
Tssr33800 1316 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs254881753
MGI SNP Detail
Alliance Variant		 Chr3:82939757 Fga Intron
Fga mRNA-UTR
Tssr33800 1327 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs212405679
MGI SNP Detail
Alliance Variant		 Chr3:82939767 Fga Intron
Fga mRNA-UTR
Tssr33800 1337 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs224495748
MGI SNP Detail
Alliance Variant		 Chr3:82939789 Fga Intron
Fga mRNA-UTR
Tssr33800 1359 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs243866847
MGI SNP Detail
Alliance Variant		 Chr3:82939837 Fga Intron
Fga mRNA-UTR
Tssr33800 1407 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs214405392
MGI SNP Detail
Alliance Variant		 Chr3:82939855 Fga Intron
Fga mRNA-UTR
Tssr33800 1425 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A A
rs232828481
MGI SNP Detail
Alliance Variant		 Chr3:82939900 Fga Intron
Fga mRNA-UTR
Tssr33800 1470 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263306171
MGI SNP Detail
Alliance Variant		 Chr3:82939904 Fga Intron
Fga mRNA-UTR
Tssr33800 1474 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217856249
MGI SNP Detail
Alliance Variant		 Chr3:82939972 Fga Intron
Fga mRNA-UTR
Tssr33800 1542 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs242851072
MGI SNP Detail
Alliance Variant		 Chr3:82940275 Fga Coding-NonSynonymous
Fga mRNA-UTR
Tssr33800 1845 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255307492
MGI SNP Detail
Alliance Variant		 Chr3:82940276 Fga Coding-Synonymous
Fga mRNA-UTR
Tssr33800 1846 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs218634173
MGI SNP Detail
Alliance Variant		 Chr3:82940285 Fga Coding-Synonymous
Fga mRNA-UTR
Tssr33800 1855 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238563523
MGI SNP Detail
Alliance Variant		 Chr3:82940392 Fga Coding-NonSynonymous
Fga mRNA-UTR
Tssr33800 1962 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
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Showing SNP(s) 1 - 88 of 88
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
03/18/2025
MGI 6.24 		The Jackson Laboratory