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Mouse SNP Summary
Symbol
Name
ID 		Tssr34391
transcription start site region 34391
MGI:5962158

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs582060887
MGI SNP Detail		 Chr3:94389663 Celf3 within coordinates of
Tssr34391 1859 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs263093075
MGI SNP Detail		 Chr3:94389667 Celf3 within coordinates of
Tssr34391 1855 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G A A G G G G G G G G G G
rs227591583
MGI SNP Detail		 Chr3:94389724 Celf3 within coordinates of
Tssr34391 1798 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs237546784
MGI SNP Detail		 Chr3:94389725 Celf3 within coordinates of
Tssr34391 1797 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs256425605
MGI SNP Detail		 Chr3:94389761 Celf3 within coordinates of
Tssr34391 1761 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs223582742
MGI SNP Detail		 Chr3:94390052 Celf3 within coordinates of
Tssr34391 1470 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs249935260
MGI SNP Detail		 Chr3:94390066 Celf3 within coordinates of
Tssr34391 1456 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs265972957
MGI SNP Detail		 Chr3:94390091 Celf3 within coordinates of
Tssr34391 1431 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G G G G G G G G G T G G G G G G G T G G G G
rs33061447
MGI SNP Detail		 Chr3:94390112 Celf3 within coordinates of
Tssr34391 1410 bp downstream
 SNP C/T C C C C C C C C C C C T C
rs257658958
MGI SNP Detail		 Chr3:94390403 Celf3 within coordinates of
Rr580638 within coordinates of
Tssr34391 1119 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs585189467
MGI SNP Detail		 Chr3:94390408 Celf3 within coordinates of
Rr580638 within coordinates of
Tssr34391 1114 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C T
rs578328303
MGI SNP Detail		 Chr3:94390418 Celf3 within coordinates of
Rr580638 within coordinates of
Tssr34391 1104 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G A G G G G G G G G G G G G
rs52434634
MGI SNP Detail		 Chr3:94390424 Celf3 within coordinates of
Tssr34391 1098 bp downstream
 SNP C C C C
rs30310751
MGI SNP Detail		 Chr3:94390429 Celf3 within coordinates of
Tssr34391 1093 bp downstream
 SNP A/G G A A
rs581717923
MGI SNP Detail		 Chr3:94390431 Celf3 within coordinates of
Tssr34391 1091 bp downstream
 SNP A/G G A G G G G G G G G A A A A A G G A G G G G A A G A G G
rs586459614
MGI SNP Detail		 Chr3:94390433 Celf3 within coordinates of
Tssr34391 1089 bp downstream
 SNP A/G/T G A A A G G G G G G G G A A A A A G G A A G G G T A A G A A
rs583871916
MGI SNP Detail		 Chr3:94390435 Celf3 within coordinates of
Tssr34391 1087 bp downstream
 SNP A/G A G A A G G G G G G G G A G A A A A G G A A G G G G A A A A G
rs585946917
MGI SNP Detail		 Chr3:94390437 Celf3 within coordinates of
Tssr34391 1085 bp downstream
 SNP A/G G A A G G G G G G G G G G A A G G A A A G G G A A G
rs579831097
MGI SNP Detail		 Chr3:94390439 Celf3 within coordinates of
Tssr34391 1083 bp downstream
 SNP A/G G G G G G G G G G G G G A A G G G G A G
rs583278810
MGI SNP Detail		 Chr3:94390441 Celf3 within coordinates of
Tssr34391 1081 bp downstream
 SNP A/G G G G G G G G G G G G A G G G G A G
rs586323328
MGI SNP Detail		 Chr3:94390443 Celf3 within coordinates of
Tssr34391 1079 bp downstream
 SNP A/G A G G G G G G G G G A G G G A G
rs232311376
MGI SNP Detail		 Chr3:94390553 Celf3 within coordinates of
Tssr34391 969 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs246054355
MGI SNP Detail		 Chr3:94390556 Celf3 within coordinates of
Tssr34391 966 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs212416448
MGI SNP Detail		 Chr3:94390618 Celf3 within coordinates of
Rr580639 within coordinates of
Tssr34391 904 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A A A G A A A A A A A G A A A A
rs33061449
MGI SNP Detail		 Chr3:94390638 Celf3 within coordinates of
Rr580639 within coordinates of
Tssr34391 884 bp downstream
 SNP C/T T T T T T T T T T T T C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33061452
MGI SNP Detail		 Chr3:94390719 Celf3 within coordinates of
Gm65215 within coordinates of
Rr580639 within coordinates of
Tssr34391 803 bp downstream
 SNP C/T C C C C C C C C C C T C C C C
rs33062155
MGI SNP Detail		 Chr3:94390751 Celf3 within coordinates of
Gm65215 within coordinates of
Rr580639 within coordinates of
Tssr34391 771 bp downstream
 SNP C/T C C C C C C C C C C C T C
rs225937135
MGI SNP Detail		 Chr3:94390773 Celf3 within coordinates of
Gm65215 within coordinates of
Rr580639 within coordinates of
Tssr34391 749 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs240080298
MGI SNP Detail		 Chr3:94390793 Celf3 within coordinates of
Gm65215 within coordinates of
Rr580639 within coordinates of
Tssr34391 729 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs251156145
MGI SNP Detail		 Chr3:94390826 Celf3 within coordinates of
Gm65215 within coordinates of
Rr580639 within coordinates of
Tssr34391 696 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs33062157
MGI SNP Detail		 Chr3:94390914 Celf3 within coordinates of
Gm65215 within coordinates of
Rr580639 within coordinates of
Tssr34391 608 bp downstream
 SNP A/G G G G G G G G G G G G G A G
rs33062160
MGI SNP Detail		 Chr3:94390937 Celf3 within coordinates of
Gm65215 within coordinates of
Rr580639 within coordinates of
Tssr34391 585 bp downstream
 SNP G/T T T T T T T T T T T T T G T
rs33062163
MGI SNP Detail		 Chr3:94391044 Celf3 within coordinates of
Gm65215 within coordinates of
Rr580639 within coordinates of
Tssr34391 478 bp downstream
 SNP A/G A A A A A A A A A A A A A G A
rs33063096
MGI SNP Detail		 Chr3:94391156 Celf3 within coordinates of
Gm65215 within coordinates of
Rr580639 within coordinates of
Tssr34391 366 bp downstream
 SNP A/T A A A A A A A A A A A T A
rs245116916
MGI SNP Detail		 Chr3:94391187 Celf3 within coordinates of
Gm65215 within coordinates of
Rr580639 within coordinates of
Tssr34391 335 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs30216498
MGI SNP Detail		 Chr3:94391202 Celf3 within coordinates of
Gm65215 within coordinates of
Rr580639 within coordinates of
Tssr34391 320 bp downstream
 SNP A/G G G A G G
rs235220660
MGI SNP Detail		 Chr3:94391242 Celf3 within coordinates of
Gm65215 within coordinates of
Rr580639 within coordinates of
Tssr34391 280 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs252434863
MGI SNP Detail		 Chr3:94391292 Celf3 within coordinates of
Cpgi13484 within coordinates of
Gm65215 within coordinates of
Rr580639 within coordinates of
Tssr34391 230 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33063099
MGI SNP Detail		 Chr3:94391377 Celf3 within coordinates of
Cpgi13484 within coordinates of
Gm65215 within coordinates of
Rr580639 within coordinates of
Tssr34391 145 bp downstream
 SNP C/T T T T T T T C T T T C T T C
rs226072640
MGI SNP Detail		 Chr3:94391402 Celf3 within coordinates of
Cpgi13484 within coordinates of
Gm65215 within coordinates of
Rr580639 within coordinates of
Tssr34391 120 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs245943119
MGI SNP Detail		 Chr3:94391405 Celf3 within coordinates of
Cpgi13484 within coordinates of
Gm65215 within coordinates of
Rr580639 within coordinates of
Tssr34391 117 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212454216
MGI SNP Detail		 Chr3:94391468 Celf3 within coordinates of
Cpgi13484 within coordinates of
Gm65215 within coordinates of
Rr580639 within coordinates of
Tssr34391 54 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs235730492
MGI SNP Detail		 Chr3:94391484 Celf3 within coordinates of
Cpgi13484 within coordinates of
Gm65215 within coordinates of
Rr580639 within coordinates of
Tssr34391 38 bp downstream
 SNP A/C C C C C C C A A C C C C C C C C C C C C C C C C C C C C C C C C C C C A A C C C C C C C C C C C C C C C
rs253649445
MGI SNP Detail		 Chr3:94391661 Celf3 within coordinates of
Cpgi13484 within coordinates of
Rr580640 within coordinates of
Tssr34391 126 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
rs217534764
MGI SNP Detail		 Chr3:94391739 Celf3 within coordinates of
Gm65218 within coordinates of
Rr580640 within coordinates of
Tssr34391 204 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33063102
MGI SNP Detail		 Chr3:94391742 Celf3 within coordinates of
Gm65218 within coordinates of
Rr580640 within coordinates of
Tssr34391 207 bp upstream
 SNP C/T C C C C C C C C C T C C T C
rs251045135
MGI SNP Detail		 Chr3:94391773 Celf3 within coordinates of
Gm65218 within coordinates of
Rr580640 within coordinates of
Tssr34391 238 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221234187
MGI SNP Detail		 Chr3:94391861 Celf3 within coordinates of
Gm65218 within coordinates of
Rr580640 within coordinates of
Tssr34391 326 bp upstream
 SNP A/G/T A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A T A A A A
rs231317873
MGI SNP Detail		 Chr3:94391993 Celf3 within coordinates of
Gm65218 within coordinates of
Rr580640 within coordinates of
Tssr34391 458 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250315226
MGI SNP Detail		 Chr3:94392014 Celf3 within coordinates of
Gm65218 within coordinates of
Rr580640 within coordinates of
Tssr34391 479 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G G G G G G G G A G G G G G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs31383801
MGI SNP Detail		 Chr3:94392039 Celf3 within coordinates of
Gm65218 within coordinates of
Tssr34391 504 bp upstream
 SNP G/T T T G T T T
rs242149886
MGI SNP Detail		 Chr3:94392058 Celf3 within coordinates of
Gm65218 within coordinates of
Tssr34391 523 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs265953412
MGI SNP Detail		 Chr3:94392078 Celf3 within coordinates of
Gm65218 within coordinates of
Tssr34391 543 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33063865
MGI SNP Detail		 Chr3:94392361 Celf3 within coordinates of
Rr580641 within coordinates of
Tssr34391 826 bp upstream
 SNP C/T T T T T T T T T T T C T T C T
rs33063868
MGI SNP Detail		 Chr3:94392411 Celf3 within coordinates of
D3Umi4 within coordinates of
Rr580641 within coordinates of
Tssr34391 876 bp upstream
 SNP A/G A A A A A A G A A A A A A A A
rs260111342
MGI SNP Detail		 Chr3:94392456 Celf3 within coordinates of
D3Umi4 within coordinates of
Rr580641 within coordinates of
Tssr34391 921 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225916406
MGI SNP Detail		 Chr3:94392460 Celf3 within coordinates of
D3Umi4 within coordinates of
Rr580641 within coordinates of
Tssr34391 925 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C A A C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs239999961
MGI SNP Detail		 Chr3:94392509 Celf3 within coordinates of
D3Umi4 within coordinates of
Rr580641 within coordinates of
Tssr34391 974 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs45654842
MGI SNP Detail		 Chr3:94392545 Celf3 within coordinates of
D3Umi4 within coordinates of
Rr580641 within coordinates of
Tssr34391 1010 bp upstream
 SNP T T T T
rs33063871
MGI SNP Detail		 Chr3:94392832 Celf3 within coordinates of
Tssr34391 1297 bp upstream
 SNP C/T C C C C C C C C C C C C C T C
rs254271052
MGI SNP Detail		 Chr3:94392895 Celf3 within coordinates of
Tssr34391 1360 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T
rs30134588
MGI SNP Detail		 Chr3:94392907 Celf3 within coordinates of
Tssr34391 1372 bp upstream
 SNP A/T T A
rs587588962
MGI SNP Detail		 Chr3:94392978 Celf3 within coordinates of
Tssr34391 1443 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs233580502
MGI SNP Detail		 Chr3:94393034 Celf3 within coordinates of
Tssr34391 1499 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G C G G G G G G G G G G G G C G G G G G G G C G G G G
rs244938515
MGI SNP Detail		 Chr3:94393036 Celf3 within coordinates of
Tssr34391 1501 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs215722864
MGI SNP Detail		 Chr3:94393038 Celf3 within coordinates of
Tssr34391 1503 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T T T C T T T T T T T C T T T T
rs231213234
MGI SNP Detail		 Chr3:94393044 Celf3 within coordinates of
Tssr34391 1509 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs250411211
MGI SNP Detail		 Chr3:94393068 Celf3 within coordinates of
Tssr34391 1533 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs581656553
MGI SNP Detail		 Chr3:94393166 Celf3 within coordinates of
Tssr34391 1631 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs33064734
MGI SNP Detail		 Chr3:94393210 Celf3 within coordinates of
Tssr34391 1675 bp upstream
 SNP C/T C C C C C C C C C C C C C T C
rs237294566
MGI SNP Detail		 Chr3:94393217 Celf3 within coordinates of
Tssr34391 1682 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33064737
MGI SNP Detail		 Chr3:94393247 Celf3 within coordinates of
Tssr34391 1712 bp upstream
 SNP C/T C C C C C C C C C C C C C T C
rs227086552
MGI SNP Detail		 Chr3:94393267 Celf3 within coordinates of
Tssr34391 1732 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240597023
MGI SNP Detail		 Chr3:94393468 Celf3 within coordinates of
Tssr34391 1933 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
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Showing SNP(s) 1 - 74 of 74
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory