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Mouse SNP Summary
Symbol
Name
ID 		Tssr34972
transcription start site region 34972
MGI:5962739

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs585311910
MGI SNP Detail		 Chr3:106430798 Cept1 within coordinates of
Tssr34972 1972 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs233493407
MGI SNP Detail		 Chr3:106430902 Cept1 within coordinates of
Tssr34972 1868 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T
rs251013734
MGI SNP Detail		 Chr3:106430935 Cept1 within coordinates of
Tssr34972 1835 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs217195283
MGI SNP Detail		 Chr3:106430988 Cept1 within coordinates of
Tssr34972 1782 bp downstream
 SNP A/C/G G G G G G G G G G G G G G G G G G G G G G G C G G G G A G G G G G A G G G G G G C G G G G G G G C G G G G
rs241637739
MGI SNP Detail		 Chr3:106430999 Cept1 within coordinates of
Tssr34972 1771 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G A G G G G G G G A G G G G
rs579507026
MGI SNP Detail		 Chr3:106431156 Cept1 within coordinates of
Tssr34972 1614 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs255964938
MGI SNP Detail		 Chr3:106431171 Cept1 within coordinates of
Tssr34972 1599 bp downstream
 SNP C/T T T T T C T T T T T T T T T T T T T T T T T T C T C T T T T T T T T T T T C T T T C T T T T T T T T
rs31138035
MGI SNP Detail		 Chr3:106431179 Cept1 within coordinates of
Tssr34972 1591 bp downstream
 SNP C/G G C G G
rs584079937
MGI SNP Detail		 Chr3:106431187 Cept1 within coordinates of
Tssr34972 1583 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G A G G G G A A G G G A A G A A A A G G G G A A G G G G G
rs586381189
MGI SNP Detail		 Chr3:106431193 Cept1 within coordinates of
Tssr34972 1577 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs30950199
MGI SNP Detail		 Chr3:106431239 Cept1 within coordinates of
Tssr34972 1531 bp downstream
 SNP A/G G A G A A
rs31424410
MGI SNP Detail		 Chr3:106431279 Cept1 within coordinates of
Tssr34972 1491 bp downstream
 SNP A/C A C A C C
rs222133109
MGI SNP Detail		 Chr3:106431371 Cept1 within coordinates of
Tssr34972 1399 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T G T T T T
rs580275156
MGI SNP Detail		 Chr3:106431392 Cept1 within coordinates of
Tssr34972 1378 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs583647486
MGI SNP Detail		 Chr3:106431399 Cept1 within coordinates of
Tssr34972 1371 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs240836388
MGI SNP Detail		 Chr3:106431484 Cept1 within coordinates of
Tssr34972 1286 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs587130430
MGI SNP Detail		 Chr3:106431501 Cept1 within coordinates of
Tssr34972 1269 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs261369831
MGI SNP Detail		 Chr3:106431511 Cept1 within coordinates of
Tssr34972 1259 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A G G A A G G G A G A A A G A A A G A A A A
rs580928601
MGI SNP Detail		 Chr3:106431525 Cept1 within coordinates of
Tssr34972 1245 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C A C C C C
rs582950291
MGI SNP Detail		 Chr3:106431568 Cept1 within coordinates of
Tssr34972 1202 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G C G G G G
rs228673834
MGI SNP Detail		 Chr3:106431646 Cept1 within coordinates of
Tssr34972 1124 bp downstream
 SNP T T T T T T T T T T T T T T T T T
rs261576499
MGI SNP Detail		 Chr3:106431650 Cept1 within coordinates of
Tssr34972 1120 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs586772670
MGI SNP Detail		 Chr3:106431684 Cept1 within coordinates of
Tssr34972 1086 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C T C C C C C T C C C C C C C
rs580649767
MGI SNP Detail		 Chr3:106432210 Cept1 within coordinates of
Tssr34972 560 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs585225441
MGI SNP Detail		 Chr3:106432430 Cept1 within coordinates of
Tssr34972 340 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs231293776
MGI SNP Detail		 Chr3:106432556 Cept1 within coordinates of
Tssr34972 214 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T C T T T T
rs235026006
MGI SNP Detail		 Chr3:106432625 Cept1 within coordinates of
Tssr34972 145 bp downstream
 SNP A A A
rs213658623
MGI SNP Detail		 Chr3:106432664 Cept1 within coordinates of
Tssr34972 106 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs227445440
MGI SNP Detail		 Chr3:106432797 Cept1 within coordinates of
Tssr34972 within coordinates of
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245159126
MGI SNP Detail		 Chr3:106432877 Cept1 within coordinates of
Tssr34972 58 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C
rs217141931
MGI SNP Detail		 Chr3:106432914 Cept1 within coordinates of
Tssr34972 95 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs239286730
MGI SNP Detail		 Chr3:106432915 Cept1 within coordinates of
Tssr34972 96 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261391930
MGI SNP Detail		 Chr3:106432952 Cept1 within coordinates of
Tssr34972 133 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs211730899
MGI SNP Detail		 Chr3:106433018 Cept1 within coordinates of
Tssr34972 199 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs238751996
MGI SNP Detail		 Chr3:106433033 Cept1 within coordinates of
Tssr34972 214 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C T C C C T T T C T C C C T C C C T C C C C
rs251560802
MGI SNP Detail		 Chr3:106433189 Cept1 within coordinates of
Tssr34972 370 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs222230442
MGI SNP Detail		 Chr3:106433194 Cept1 within coordinates of
Tssr34972 375 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G A A G G A A A G A G G G A G G G A G G G G
rs240751362
MGI SNP Detail		 Chr3:106433208 Cept1 within coordinates of
Tssr34972 389 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C G C C C C C C C C C C C C C C G C C C C
rs255535087
MGI SNP Detail		 Chr3:106433238 Cept1 within coordinates of
Tssr34972 419 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs226353420
MGI SNP Detail		 Chr3:106433326 Cept1 within coordinates of
Tssr34972 507 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs242364018
MGI SNP Detail		 Chr3:106433348 Cept1 within coordinates of
Tssr34972 529 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33715840
MGI SNP Detail		 Chr3:106433392 Cept1 within coordinates of
Tssr34972 573 bp upstream
 SNP C/T C C C C C C C C C C T C C T C
rs230959392
MGI SNP Detail		 Chr3:106433471 Cept1 within coordinates of
Tssr34972 652 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs246100208
MGI SNP Detail		 Chr3:106433472 Cept1 within coordinates of
Tssr34972 653 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T A T T T T T T T T T T T T T T A T T T T
rs255309099
MGI SNP Detail		 Chr3:106433473 Cept1 within coordinates of
Tssr34972 654 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T T A T T T T T T T T T T T T T T A T T T T
rs227554901
MGI SNP Detail		 Chr3:106433488 Cept1 within coordinates of
Tssr34972 669 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs245132557
MGI SNP Detail		 Chr3:106433499 Cept1 within coordinates of
Tssr34972 680 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C T T C C T T T C T C C C T C C C T C C C C
rs217216926
MGI SNP Detail		 Chr3:106433549 Cept1 within coordinates of
Tssr34972 730 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T C T T T C C C T C T T T C T T T T T T T T
rs233962343
MGI SNP Detail		 Chr3:106433560 Cept1 within coordinates of
Tssr34972 741 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C T T T C C C C T C C C C C C C C
rs249659300
MGI SNP Detail		 Chr3:106433563 Cept1 within coordinates of
Tssr34972 744 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G A A A G G G G A G G G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs211976692
MGI SNP Detail		 Chr3:106433572 Cept1 within coordinates of
Tssr34972 753 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T A A A T T T T A T T T T T T T T
rs236613268
MGI SNP Detail		 Chr3:106433635 Cept1 within coordinates of
Tssr34972 816 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs244708596
MGI SNP Detail		 Chr3:106433670 Cept1 within coordinates of
Tssr34972 851 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216254439
MGI SNP Detail		 Chr3:106433783 Cept1 within coordinates of
Tssr34972 964 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs33715843
MGI SNP Detail		 Chr3:106433788 Cept1 within coordinates of
Tssr34972 969 bp upstream
 SNP C/T T T T T T T C T T T T T T
rs255655787
MGI SNP Detail		 Chr3:106433799 Cept1 within coordinates of
Tssr34972 980 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226056014
MGI SNP Detail		 Chr3:106433805 Cept1 within coordinates of
Tssr34972 986 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs237500288
MGI SNP Detail		 Chr3:106433817 Cept1 within coordinates of
Tssr34972 998 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs255660363
MGI SNP Detail		 Chr3:106433834 Cept1 within coordinates of
Tssr34972 1015 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33716586
MGI SNP Detail		 Chr3:106433844 Cept1 within coordinates of
Tssr34972 1025 bp upstream
 SNP A/G G G G G G G A G G G G G G G G
rs237617026
MGI SNP Detail		 Chr3:106433885 Cept1 within coordinates of
Tssr34972 1066 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs33716589
MGI SNP Detail		 Chr3:106433897 Cept1 within coordinates of
Tssr34972 1078 bp upstream
 SNP C/T T T C C C T C C C T T C C T C C C C
rs220849292
MGI SNP Detail		 Chr3:106433931 Cept1 within coordinates of
Tssr34972 1112 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs239186808
MGI SNP Detail		 Chr3:106433940 Cept1 within coordinates of
Tssr34972 1121 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs266143077
MGI SNP Detail		 Chr3:106434094 Cept1 within coordinates of
Tssr34972 1275 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs33716592
MGI SNP Detail		 Chr3:106434185 Cept1 within coordinates of
Tssr34972 1366 bp upstream
 SNP A/G A A A A A A A A A A A A A G A
rs232998372
MGI SNP Detail		 Chr3:106434208 Cept1 within coordinates of
Tssr34972 1389 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A T T T A A A A A T A A A A A A A A
rs254020016
MGI SNP Detail		 Chr3:106434222 Cept1 within coordinates of
Tssr34972 1403 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs261294209
MGI SNP Detail		 Chr3:106434414 Cept1 within coordinates of
Tssr34972 1595 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G T G G G G T T G G T T T G T G G G T G G G T G G G G
rs230922849
MGI SNP Detail		 Chr3:106434426 Cept1 within coordinates of
Tssr34972 1607 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C T T T C C C C C T C C C C C C C C
rs244680618
MGI SNP Detail		 Chr3:106434562 Cept1 within coordinates of
Tssr34972 1743 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A G G G A A A A A G A A A A A A A A
rs215592294
MGI SNP Detail		 Chr3:106434611 Cept1 within coordinates of
Tssr34972 1792 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C G C C C C C C C C C C C C C C G C C C C
rs233517568
MGI SNP Detail		 Chr3:106434622 Cept1 within coordinates of
Tssr34972 1803 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs249165347
MGI SNP Detail		 Chr3:106434736 Cept1 within coordinates of
Tssr34972 1917 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218629507
MGI SNP Detail		 Chr3:106434762 Cept1 within coordinates of
Tssr34972 1943 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
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Showing SNP(s) 1 - 75 of 75
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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