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Mouse SNP Summary
Symbol
Name
ID
Tssr35829
transcription start site region 35829
MGI:5963596

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Showing SNP(s) 1 - 59 of 59

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs229128721
MGI SNP Detail
Alliance Variant
Chr3:135395374 Nfkb1 Intron
Tssr35829 1772 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A T A A A A T A A A A A T A A A A A A T A A A A A A A A A A A A
rs246542802
MGI SNP Detail
Alliance Variant
Chr3:135395569 Nfkb1 Intron
Tssr35829 1577 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A T A A A A A A T A A A A A A A T A A A A
rs212696937
MGI SNP Detail
Alliance Variant
Chr3:135395587 Nfkb1 Intron
Tssr35829 1559 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs236521042
MGI SNP Detail
Alliance Variant
Chr3:135395731 Nfkb1 Intron
Tssr35829 1415 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs251670514
MGI SNP Detail
Alliance Variant
Chr3:135395844 Nfkb1 Intron
Tssr35829 1302 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs29975303
MGI SNP Detail
Alliance Variant
Chr3:135395847 Nfkb1 Intron
Tssr35829 1299 bp downstream
SNP G/T G T T T
rs30710277
MGI SNP Detail
Alliance Variant
Chr3:135395879 Nfkb1 Intron
Tssr35829 1267 bp downstream
SNP A/T A T T T
rs31243464
MGI SNP Detail
Alliance Variant
Chr3:135396001 Nfkb1 Intron
Rr398044 within coordinates of
Tssr35829 1145 bp downstream
SNP C/T C T T
rs30796703
MGI SNP Detail
Alliance Variant
Chr3:135396017 Nfkb1 Intron
Rr398044 within coordinates of
Tssr35829 1129 bp downstream
SNP A/C C A A
rs223758169
MGI SNP Detail
Alliance Variant
Chr3:135396098 Nfkb1 Intron
Rr398044 within coordinates of
Tssr35829 1048 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs235826526
MGI SNP Detail
Alliance Variant
Chr3:135396189 Nfkb1 Intron
Rr398044 within coordinates of
Tssr35829 957 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs261740358
MGI SNP Detail
Alliance Variant
Chr3:135396272 Nfkb1 Intron
Tssr35829 874 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs220776130
MGI SNP Detail
Alliance Variant
Chr3:135396318 Nfkb1 Intron
Tssr35829 828 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243771162
MGI SNP Detail
Alliance Variant
Chr3:135396320 Nfkb1 Intron
Tssr35829 826 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs578655258
MGI SNP Detail
Alliance Variant
Chr3:135396347 Nfkb1 Intron
Tssr35829 799 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs262655441
MGI SNP Detail
Alliance Variant
Chr3:135396397 Nfkb1 Intron
Tssr35829 749 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs219107132
MGI SNP Detail
Alliance Variant
Chr3:135396404 Nfkb1 Intron
Tssr35829 742 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T C T T T C T T C C
rs239659401
MGI SNP Detail
Alliance Variant
Chr3:135396584 Cpgi13858 within coordinates of
Nfkb1 Intron
Tssr35829 562 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs257195665
MGI SNP Detail
Alliance Variant
Chr3:135396641 Cpgi13858 within coordinates of
Nfkb1 Intron
Tssr35829 505 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs229249976
MGI SNP Detail
Alliance Variant
Chr3:135396775 Cpgi13858 within coordinates of
Nfkb1 Intron
Tssr35829 371 bp downstream
SNP C/T T C C C C C T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C C C C T C C C C C C C
rs253882052
MGI SNP Detail
Alliance Variant
Chr3:135396809 Cpgi13858 within coordinates of
Nfkb1 Intron
Tssr35829 337 bp downstream
SNP C/T C T T T T T C T T T T T T T T T C T T C T T T T C C T C T C T T C T T T C T T T C C T T C T T C
rs584928253
MGI SNP Detail
Alliance Variant
Chr3:135396970 Cpgi13858 within coordinates of
Nfkb1 mRNA-UTR
Tssr35825 within coordinates of
Tssr35829 176 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C
rs264837737
MGI SNP Detail
Alliance Variant
Chr3:135397076 Cpgi13858 within coordinates of
Nfkb1 mRNA-UTR
Tssr35829 70 bp downstream
SNP A/G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G
rs227485778
MGI SNP Detail
Alliance Variant
Chr3:135397354 Cpgi13858 within coordinates of
Nfkb1 mRNA-UTR
Rr585767 within coordinates of
Tssr35829 186 bp upstream
SNP G/T T T T T T T T T T T T T T G T T G T T T G T T T T T T T T T T G T T T T T T T G T T T T
rs256519807
MGI SNP Detail
Alliance Variant
Chr3:135397398 Cpgi13858 within coordinates of
Nfkb1 mRNA-UTR
Rr585767 within coordinates of
Tssr35829 230 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A C A A A A A A A A A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs213938013
MGI SNP Detail
Chr3:135397529 Cpgi13858 within coordinates of
Rr585767 within coordinates of
Tssr35829 361 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs234864752
MGI SNP Detail
Chr3:135397531 Cpgi13858 within coordinates of
Rr585767 within coordinates of
Tssr35829 363 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs246508933
MGI SNP Detail
Chr3:135397538 Cpgi13858 within coordinates of
Rr585767 within coordinates of
Tssr35829 370 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs217487970
MGI SNP Detail
Chr3:135397645 Cpgi13858 within coordinates of
Rr585767 within coordinates of
Tssr35829 477 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs37096263
MGI SNP Detail
Chr3:135397672 Cpgi13858 within coordinates of
Rr585767 within coordinates of
Tssr35829 504 bp upstream
SNP C/T T T T T T T C T T T C T T C T
rs256655147
MGI SNP Detail
Chr3:135397726 Cpgi13858 within coordinates of
Rr585767 within coordinates of
Tssr35829 558 bp upstream
Tssr35834 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs36792541
MGI SNP Detail
Chr3:135397801 Tssr35829 633 bp upstream
SNP A/G G G G G G G G G G G A G G A G
rs237251601
MGI SNP Detail
Chr3:135398104 Tssr35829 936 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs262328688
MGI SNP Detail
Chr3:135398106 Tssr35829 938 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs219134974
MGI SNP Detail
Chr3:135398191 Tssr35829 1023 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T C T T T T T T T T T T T T T T C T T T T
rs239790579
MGI SNP Detail
Chr3:135398210 Tssr35829 1042 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs250967563
MGI SNP Detail
Chr3:135398308 Tssr35829 1140 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C T C C C C C C C C C C C C C C T C C C C
rs222362462
MGI SNP Detail
Chr3:135398318 Tssr35829 1150 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs250167308
MGI SNP Detail
Chr3:135398331 Tssr35829 1163 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs261916780
MGI SNP Detail
Chr3:135398346 Tssr35829 1178 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs228013791
MGI SNP Detail
Chr3:135398347 Tssr35829 1179 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G A G G G G G A G G G G G G G G G G G G G G A G G G G
rs37485877
MGI SNP Detail
Chr3:135398411 Tssr35829 1243 bp upstream
SNP A/G G G G G G G A G G G G G G G G
rs257717234
MGI SNP Detail
Chr3:135398477 Tssr35829 1309 bp upstream
SNP A/G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs228222117
MGI SNP Detail
Chr3:135398497 Tssr35829 1329 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A G A A A A A A A A A A A A G A A A A
rs36995529
MGI SNP Detail
Chr3:135398581 Tssr35829 1413 bp upstream
SNP A/C C C C C C C A C C C C C C C C
rs37499606
MGI SNP Detail
Chr3:135398727 Tssr35829 1559 bp upstream
SNP A/G A A A A A A G A A A A A A A
rs37034960
MGI SNP Detail
Chr3:135398741 Tssr35829 1573 bp upstream
SNP G/T T T T T T T G T T T T T T T
rs38122761
MGI SNP Detail
Chr3:135398771 Tssr35829 1603 bp upstream
SNP A/G A A A A A A G A A A G A A A A
rs212353182
MGI SNP Detail
Chr3:135398803 Rr585768 within coordinates of
Tssr35829 1635 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs239308262
MGI SNP Detail
Chr3:135398835 Rr585768 within coordinates of
Tssr35829 1667 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs257392925
MGI SNP Detail
Chr3:135398867 Rr585768 within coordinates of
Tssr35829 1699 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216178465
MGI SNP Detail
Chr3:135398969 Rr585768 within coordinates of
Tssr35829 1801 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs233406522
MGI SNP Detail
Chr3:135398994 Rr585768 within coordinates of
Tssr35829 1826 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs585498467
MGI SNP Detail
Chr3:135399028 Rr585768 within coordinates of
Tssr35829 1860 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs579435650
MGI SNP Detail
Chr3:135399029 Rr585768 within coordinates of
Tssr35829 1861 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs36268491
MGI SNP Detail
Chr3:135399041 Rr585768 within coordinates of
Tssr35829 1873 bp upstream
SNP A/G G G G G G G A G G G A G G G G
rs251003814
MGI SNP Detail
Chr3:135399145 Tssr35829 1977 bp upstream
SNP G/T G T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs581843328
MGI SNP Detail
Chr3:135399154 Tssr35829 1986 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G C
rs585495887
MGI SNP Detail
Chr3:135399156 Tssr35829 1988 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G C
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Showing SNP(s) 1 - 59 of 59

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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory