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Mouse SNP Summary
Symbol
Name
ID
Tssr36093
transcription start site region 36093
MGI:5963860

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Showing SNP(s) 1 - 77 of 77

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs240446668
MGI SNP Detail
Chr3:148780900 Tssr36093 1887 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A A A A A A A A A A A A A A
rs263857389
MGI SNP Detail
Chr3:148781069 Tssr36093 1718 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs253628572
MGI SNP Detail
Chr3:148781163 Tssr36093 1624 bp downstream
SNP A/G G A
rs51006348
MGI SNP Detail
Chr3:148781191 Tssr36093 1596 bp downstream
SNP A/G G G G G G G G G A G A G
rs46475087
MGI SNP Detail
Chr3:148781211 Tssr36093 1576 bp downstream
SNP C/T T T T T T C T T T C T T
rs222112347
MGI SNP Detail
Chr3:148781457 Tssr36093 1330 bp downstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs48165189
MGI SNP Detail
Chr3:148781471 Tssr36093 1316 bp downstream
SNP C/T C C C C C C C T T T C C T C C
rs252348358
MGI SNP Detail
Chr3:148781493 Tssr36093 1294 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs219882833
MGI SNP Detail
Chr3:148781499 Tssr36093 1288 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs51277632
MGI SNP Detail
Chr3:148781526 Tssr36093 1261 bp downstream
SNP C/G C C C C C C C C G C C
rs261758810
MGI SNP Detail
Chr3:148781642 Tssr36093 1145 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs227751052
MGI SNP Detail
Chr3:148781647 Tssr36093 1140 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs30009333
MGI SNP Detail
Chr3:148781704 Tssr36093 1083 bp downstream
SNP C/T C T C C
rs265869820
MGI SNP Detail
Chr3:148781732 Tssr36093 1055 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs227385040
MGI SNP Detail
Chr3:148781754 Tssr36093 1033 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245141951
MGI SNP Detail
Chr3:148781895 Tssr36093 892 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs214317836
MGI SNP Detail
Chr3:148782008 Tssr36093 779 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51852583
MGI SNP Detail
Chr3:148782032 Tssr36093 755 bp downstream
SNP C/G G G G G G G G G C G C G
rs52139186
MGI SNP Detail
Chr3:148782169 Tssr36093 618 bp downstream
SNP C/G C C C C C C C G G G C C C
rs580184582
MGI SNP Detail
Chr3:148782379 Tssr36093 408 bp downstream
SNP C C C C C C C C C C C C C C C C C C C C C C
rs584124138
MGI SNP Detail
Chr3:148782385 Tssr36093 402 bp downstream
SNP C C C C C C C C C C C C C C C C C C C C C C
rs586424475
MGI SNP Detail
Chr3:148782388 Tssr36093 399 bp downstream
SNP C/T C C C C C C C C C C T C C C C C C C C C T C C
rs580421254
MGI SNP Detail
Chr3:148782397 Tssr36093 390 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C
rs254176732
MGI SNP Detail
Chr3:148782498 Tssr36093 289 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs212075966
MGI SNP Detail
Chr3:148782530 Tssr36093 257 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs243167012
MGI SNP Detail
Chr3:148782562 Tssr36093 225 bp downstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A A T A T T A T T A T T T T T T T T T T T A T T T T
rs260353436
MGI SNP Detail
Chr3:148782563 Tssr36093 224 bp downstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs256317411
MGI SNP Detail
Chr3:148782577 Tssr36093 210 bp downstream
SNP A/C A C
rs234200649
MGI SNP Detail
Chr3:148782589 Tssr36093 198 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs46059869
MGI SNP Detail
Chr3:148782645 Tssr36093 142 bp downstream
SNP A/G G G G G G G G A A A G A G G
rs219810378
MGI SNP Detail
Chr3:148782672 Tssr36093 115 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs51025510
MGI SNP Detail
Chr3:148782690 Tssr36093 97 bp downstream
SNP A/G G G G G G G G A A G G G G G G
rs242571272
MGI SNP Detail
Chr3:148782700 Tssr36093 87 bp downstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs261204604
MGI SNP Detail
Chr3:148782721 Tssr36093 66 bp downstream
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs219862748
MGI SNP Detail
Chr3:148782732 Tssr36091 within coordinates of
Tssr36093 55 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs265014780
MGI SNP Detail
Chr3:148782744 Tssr36093 43 bp downstream
SNP C/T C T
rs258647732
MGI SNP Detail
Chr3:148782752 Tssr36092 within coordinates of
Tssr36093 35 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs227348551
MGI SNP Detail
Chr3:148782777 Tssr36093 10 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs49928891
MGI SNP Detail
Chr3:148783036 Tssr36093 240 bp upstream
SNP A/G A A A A A A A G G A A A A
rs239045334
MGI SNP Detail
Chr3:148783204 Tssr36093 408 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs256107093
MGI SNP Detail
Chr3:148783239 Tssr36093 443 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs225160486
MGI SNP Detail
Chr3:148783300 Tssr36093 504 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs249841016
MGI SNP Detail
Chr3:148783301 Tssr36093 505 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs51362812
MGI SNP Detail
Chr3:148783358 Tssr36093 562 bp upstream
SNP G/T T G T
rs233879284
MGI SNP Detail
Chr3:148783477 Tssr36093 681 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259245997
MGI SNP Detail
Chr3:148783548 Tssr36093 752 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs216031822
MGI SNP Detail
Chr3:148783555 Tssr36093 759 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs234084978
MGI SNP Detail
Chr3:148783599 Tssr36093 803 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245893935
MGI SNP Detail
Chr3:148783619 Tssr36093 823 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs213885681
MGI SNP Detail
Chr3:148783622 Tssr36093 826 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs237484730
MGI SNP Detail
Chr3:148783623 Tssr36093 827 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs215598890
MGI SNP Detail
Chr3:148783673 Tssr36093 877 bp upstream
SNP A/G A G
rs255786918
MGI SNP Detail
Chr3:148783681 Tssr36093 885 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs48656072
MGI SNP Detail
Chr3:148783683 Tssr36093 887 bp upstream
SNP A/G G G G G G G G A A A G G G
rs239916181
MGI SNP Detail
Chr3:148783728 Tssr36093 932 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs582940449
MGI SNP Detail
Chr3:148783779 Tssr36093 983 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs31186829
MGI SNP Detail
Chr3:148783849 Tssr36093 1053 bp upstream
SNP C/T C C T C T C T C C T C C T C
rs221178152
MGI SNP Detail
Chr3:148783852 Tssr36093 1056 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A C A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs238939195
MGI SNP Detail
Chr3:148783876 Tssr36093 1080 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs256055814
MGI SNP Detail
Chr3:148783878 Tssr36093 1082 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs222372933
MGI SNP Detail
Chr3:148783986 Tssr36093 1190 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs31387075
MGI SNP Detail
Chr3:148783997 Tssr36093 1201 bp upstream
SNP C/T C C T C T C T C C T C C T C C
rs586485264
MGI SNP Detail
Chr3:148784001 Tssr36093 1205 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs261437322
MGI SNP Detail
Chr3:148784021 Tssr36093 1225 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs581071668
MGI SNP Detail
Chr3:148784026 Tssr36093 1230 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs234959437
MGI SNP Detail
Chr3:148784032 Tssr36093 1236 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs247986414
MGI SNP Detail
Chr3:148784132 Tssr36093 1336 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31738843
MGI SNP Detail
Chr3:148784158 Tssr36093 1362 bp upstream
SNP C/T T C T T
rs227436870
MGI SNP Detail
Chr3:148784236 Tssr36093 1440 bp upstream
SNP A/T A A A T A A T T A A T T A A A A A A A T A T A A A T T A A A A A T A A T A T T T T T T A T T T A A T T A T
rs245857899
MGI SNP Detail
Chr3:148784268 Tssr36093 1472 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs213798656
MGI SNP Detail
Chr3:148784273 Tssr36093 1477 bp upstream
SNP A/G G G G A G G A A G G A A G G G G G G G G G A G G G A A G G G G G A G G A G A A A A A A G A A A G G A A G A
rs235611881
MGI SNP Detail
Chr3:148784295 Tssr36093 1499 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs253137301
MGI SNP Detail
Chr3:148784319 Tssr36093 1523 bp upstream
SNP G/T G G G T G G T T G G T T G G G G G G G G G T G G G T T G G G G G T G G T G T T T T T T G T T T G G T T G G
rs219679910
MGI SNP Detail
Chr3:148784327 Tssr36093 1531 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs242478792
MGI SNP Detail
Chr3:148784380 Tssr36093 1584 bp upstream
SNP A/T A A A T A A T T A A T T A A A A A A A A A T A A A T T A A A A A T A A T A T T T T T T A T T T A A T T A T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs252292909
MGI SNP Detail
Chr3:148784544 Tssr36093 1748 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs221142827
MGI SNP Detail
Chr3:148784593 Tssr36093 1797 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
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Showing SNP(s) 1 - 77 of 77

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory