Tssr36202 Mouse SNP Summary

Mouse SNP Summary

Symbol
Name
ID

Tssr36202
transcription start site region 36202
MGI:5963969

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Showing SNP(s) 1 - 56 of 56

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SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs36358464 MGI SNP Detail Alliance Variant	Chr3:151957514	Gm43185 within coordinates of Nexn Intron Tssr36202 1924 bp downstream	SNP	C/T		C			C	C		C		C			C								C					C	C			C					C	C				C		T												C
rs38014804 MGI SNP Detail Alliance Variant	Chr3:151957606	Gm43185 within coordinates of Nexn Intron Tssr36202 1832 bp downstream	SNP	A/G		A			A	A		A		A			A								A					A	A			A					A	A				A		G												A
rs37526099 MGI SNP Detail Alliance Variant	Chr3:151957680	Gm43185 within coordinates of Nexn Intron Tssr36202 1758 bp downstream	SNP	A/C		C			C	C		C		C			C								C					C	C			C					C	C				C		A												C
rs36660226 MGI SNP Detail Alliance Variant	Chr3:151957784	Gm43185 within coordinates of Nexn Intron Tssr36202 1654 bp downstream	SNP	C/T		C			C	C		C		C			C								C					C	C			C					C	C				C		T												C
rs36300157 MGI SNP Detail Alliance Variant	Chr3:151957887	Gm43185 within coordinates of Nexn Intron Tssr36202 1551 bp downstream	SNP	A/G		A			A	A		A		A			A								G					A	A			A					A	A				A		G												A
rs248193203 MGI SNP Detail Alliance Variant	Chr3:151957929	Gm43185 within coordinates of Nexn Intron Tssr36202 1509 bp downstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs216040150 MGI SNP Detail Alliance Variant	Chr3:151957958	Gm43185 within coordinates of Nexn Intron Tssr36202 1480 bp downstream	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T
rs234015707 MGI SNP Detail Alliance Variant	Chr3:151957961	Gm43185 within coordinates of Nexn Intron Tssr36202 1477 bp downstream	SNP	C/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	C	G	G	C	G	G	G	G	C	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G
rs252159573 MGI SNP Detail Alliance Variant	Chr3:151958075	Gm43185 within coordinates of Nexn Intron Tssr36202 1363 bp downstream	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	A	A
rs38112983 MGI SNP Detail Alliance Variant	Chr3:151958077	Gm43185 within coordinates of Nexn Intron Tssr36202 1361 bp downstream	SNP	C/T		C			C	C		C		C			C								C					C	C			C					C	C				C		T												C
rs222188077 MGI SNP Detail Alliance Variant	Chr3:151958392	Gm43185 within coordinates of Nexn Intron Tssr36202 1046 bp downstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs37236657 MGI SNP Detail Alliance Variant	Chr3:151958441	Nexn Intron Nexn Splice-Site Tssr36202 997 bp downstream	SNP	A/C		C			C	C		C		C			C								C					C	C			C					C	C				C		A												C
rs586654597 MGI SNP Detail Alliance Variant	Chr3:151958673	Nexn Intron Tssr36202 765 bp downstream	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs261505781 MGI SNP Detail Alliance Variant	Chr3:151958724	Nexn Coding-NonSynonymous Nexn Intron Tssr36196 within coordinates of Tssr36202 714 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs220245145 MGI SNP Detail Alliance Variant	Chr3:151958783	Nexn Intron Tssr36202 655 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G		G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs233120195 MGI SNP Detail Alliance Variant	Chr3:151958901	Nexn Intron Tssr36202 537 bp downstream	SNP	C/T																																C																		T
rs31229859 MGI SNP Detail Alliance Variant	Chr3:151958948	Nexn Intron Tssr36202 490 bp downstream	SNP	A/C				A	C											C										C						A																		A
rs258727803 MGI SNP Detail Alliance Variant	Chr3:151959010	Nexn Intron Tssr36202 428 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs221316089 MGI SNP Detail Alliance Variant	Chr3:151959018	Nexn Intron Tssr36202 420 bp downstream	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs37384760 MGI SNP Detail Alliance Variant	Chr3:151959094	Nexn Intron Tssr36202 344 bp downstream	SNP	A/G		G			G	G		G		G			G								G					G	G			G					G	G				G		A												G
rs36420082 MGI SNP Detail Alliance Variant	Chr3:151959106	Nexn Intron Tssr36202 332 bp downstream	SNP	C/T		C			C	C		C		C			C								C					C	C			C					C	C				C														T
rs38211932 MGI SNP Detail Alliance Variant	Chr3:151959107	Nexn Intron Tssr36202 331 bp downstream	SNP	A/G		G			G	G		G		G			G								G					G	G			G					G	G				G		A												G
rs262631217 MGI SNP Detail Alliance Variant	Chr3:151959167	Nexn Intron Tssr36202 271 bp downstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs40142850 MGI SNP Detail Alliance Variant	Chr3:151959214	Nexn Intron Tssr36202 224 bp downstream	SNP	A/G		G			G	G		G		G			G								G					G	G			G					G	G				G		A												G
rs229775211 MGI SNP Detail Alliance Variant	Chr3:151959216	Nexn Intron Tssr36202 222 bp downstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs37306581 MGI SNP Detail Alliance Variant	Chr3:151959517	Nexn Intron Tssr36202 68 bp upstream	SNP	A/T		A			A	A		A		A			A								A					A	A			A					A	A				A		A												T
rs264741386 MGI SNP Detail Alliance Variant	Chr3:151959550	Nexn Intron Tssr36202 101 bp upstream	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs38391827 MGI SNP Detail Alliance Variant	Chr3:151959567	Nexn Intron Tssr36202 118 bp upstream	SNP	A/G		G			G	G		G		G			G								G					G	G			G					G	G				G		A												G
rs234139754 MGI SNP Detail Alliance Variant	Chr3:151959590	Nexn Intron Tssr36202 141 bp upstream	SNP	C/T	C	C			C	C	C	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C		C	C	C	C	C	C		C	C	C	C	C	C	C		T	C	C	C	C
rs37447745 MGI SNP Detail Alliance Variant	Chr3:151959749	Nexn Intron Tssr36202 300 bp upstream	SNP	C/T		C			C	C		C		C			C								T					C	C			C					C	C				C		C												T
rs248225914 MGI SNP Detail Alliance Variant	Chr3:151959783	Nexn Intron Tssr36202 334 bp upstream	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs216175326 MGI SNP Detail Alliance Variant	Chr3:151959833	Nexn Intron Tssr36202 384 bp upstream	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs38640517 MGI SNP Detail Alliance Variant	Chr3:151959864	Nexn Intron Tssr36202 415 bp upstream	SNP	A/G		G			G	G		G		G			G								G					G	G			G					G	G				G		A												G
rs580704946 MGI SNP Detail Alliance Variant	Chr3:151959876	Nexn Intron Tssr36202 427 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs38180113 MGI SNP Detail Alliance Variant	Chr3:151959889	Nexn Intron Tssr36202 440 bp upstream	SNP	C/T		T			T	T		T		T			T													T	T			T					T	T				T		C
rs245864332 MGI SNP Detail Alliance Variant	Chr3:151959915	Nexn Intron Tssr36202 466 bp upstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A	A	A	A	G	A	G	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	G	G
rs213892402 MGI SNP Detail Alliance Variant	Chr3:151959934	Nexn Intron Tssr36202 485 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs237321180 MGI SNP Detail Alliance Variant	Chr3:151959939	Nexn Intron Tssr36202 490 bp upstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs256264997 MGI SNP Detail Alliance Variant	Chr3:151960179	Nexn Intron Tssr36202 730 bp upstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs212141292 MGI SNP Detail Alliance Variant	Chr3:151960208	Nexn Intron Tssr36202 759 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	A	A
rs235173321 MGI SNP Detail Alliance Variant	Chr3:151960218	Nexn Intron Tssr36202 769 bp upstream	SNP	C/T	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	T	C	C	C	C
rs252577129 MGI SNP Detail Alliance Variant	Chr3:151960252	Nexn Intron Tssr36202 803 bp upstream	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs221345712 MGI SNP Detail Alliance Variant	Chr3:151960258	Nexn Intron Tssr36202 809 bp upstream	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs239024093 MGI SNP Detail Alliance Variant	Chr3:151960292	Nexn Intron Tssr36202 843 bp upstream	SNP	A/C	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	C	A	A	A	A	A	A	A	A	A	C	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	C	A	A	C	C
rs584337598 MGI SNP Detail Alliance Variant	Chr3:151960345	Nexn Intron Tssr36202 896 bp upstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs262307634 MGI SNP Detail Alliance Variant	Chr3:151960551	Nexn Intron Tssr36202 1102 bp upstream	SNP	A/T	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A		A	A	T
rs222278467 MGI SNP Detail Alliance Variant	Chr3:151960664	Nexn Intron Tssr36202 1215 bp upstream	SNP	G/T	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	T	T
rs244576993 MGI SNP Detail Alliance Variant	Chr3:151960683	Nexn Intron Tssr36202 1234 bp upstream	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	C	T	T	T	T	C	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	C	T	T	T	T
rs261731423 MGI SNP Detail Alliance Variant	Chr3:151960684	Nexn Intron Tssr36202 1235 bp upstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs582923141 MGI SNP Detail Alliance Variant	Chr3:151960873	Nexn Intron Tssr36202 1424 bp upstream	SNP	C/G	C	C	C				C			C	C		G	C	C	C	C	C	C	C		C	C		C	C	C					C	C	C		C		C	C	C			C			C	G		C	C	C	C	C		C
SNP ID (GRCm39)	Map Position (GRCm39)	Gene & Category	Variation Type	Allele Summary (all strains)	129P2/OlaHsd	129S1/SvImJ	129S5/SvEvBrd	129X1/SvJ	A/J	AKR/J	B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3<tf>/J	BUB/BnJ	C3H/HeH	C3H/HeJ	C57BL/10J	C57BL/10SnJ	C57BL/6J	C57BL/6NJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWD/PhJ	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	SM/J	SPRET/EiJ	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs229607988 MGI SNP Detail Alliance Variant	Chr3:151961013	Nexn Intron Tssr36202 1564 bp upstream	SNP	C/T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T	T		T	T	T	T	T	T	T	T	T	T	T	C	C
rs242346867 MGI SNP Detail Alliance Variant	Chr3:151961017	Nexn Intron Tssr36202 1568 bp upstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs584849613 MGI SNP Detail Alliance Variant	Chr3:151961039	Nexn Intron Tssr36202 1590 bp upstream	SNP	A/G	A	A	A		A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G	A	A	A	A	G	A	A	A	A	A	A	A	A	A	A	A	A		A	A	A	A	A	A	A	A	G	A	A	A	A
rs260221687 MGI SNP Detail Alliance Variant	Chr3:151961091	Nexn Intron Tssr36202 1642 bp upstream	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	G	C	C	C	C
rs227611297 MGI SNP Detail Alliance Variant	Chr3:151961133	Nexn Intron Tssr36202 1684 bp upstream	SNP	A/G	G	G	G		G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G	G	G	G	A	G	G	G	G	G	G	G	G	G	G	G	G		G	G	G	G	G	G	G	G	A	G	G	G	G
rs251699310 MGI SNP Detail Alliance Variant	Chr3:151961214	Nexn Intron Tssr36202 1765 bp upstream	SNP	C/G	C	C	C		C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C	C	C	C	G	C	C	C	C	C	C	C	C	C	C	C	C		C	C	C	C	C	C	C	C	G	C	C	C	C

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Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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