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Mouse SNP Summary
Symbol
Name
ID
Tssr37359
transcription start site region 37359
MGI:5965126

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SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs48363076
MGI SNP Detail
Chr4:57566183 Pakap within coordinates of
Rr89687 within coordinates of
Tssr37359 1938 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs247088039
MGI SNP Detail
Chr4:57566282 Pakap within coordinates of
Tssr37359 1839 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259337772
MGI SNP Detail
Chr4:57566298 Pakap within coordinates of
Tssr37359 1823 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs222047892
MGI SNP Detail
Chr4:57566306 Pakap within coordinates of
Tssr37359 1815 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs580772646
MGI SNP Detail
Chr4:57566312 Pakap within coordinates of
Tssr37359 1809 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
rs582844656
MGI SNP Detail
Chr4:57566313 Pakap within coordinates of
Tssr37359 1808 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs586942392
MGI SNP Detail
Chr4:57566316 Pakap within coordinates of
Tssr37359 1805 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G T G G T G G G G T G G G G G T G G G G G G T G G G G G G G G G G G G
rs241909452
MGI SNP Detail
Chr4:57566330 Pakap within coordinates of
Tssr37359 1791 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A A A A A G A A A A
rs261160889
MGI SNP Detail
Chr4:57566340 Pakap within coordinates of
Tssr37359 1781 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs228163997
MGI SNP Detail
Chr4:57566478 Pakap within coordinates of
Tssr37359 1643 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs249843231
MGI SNP Detail
Chr4:57566490 Pakap within coordinates of
Tssr37359 1631 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs264987627
MGI SNP Detail
Chr4:57566538 Pakap within coordinates of
Tssr37359 1583 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T A T T T T T A T T T T T T A T T T T T T T A T T T T
rs230659605
MGI SNP Detail
Chr4:57566564 Pakap within coordinates of
Tssr37359 1557 bp upstream
SNP C/T T T T T T T T T T C T T T T T T T T T C T T C T T T T C T C T T T C T T T T T T C T T T T T T T C T T T C
rs244975511
MGI SNP Detail
Chr4:57566654 Pakap within coordinates of
Tssr37359 1467 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C C C C C T C C C C
rs215738369
MGI SNP Detail
Chr4:57566738 Pakap within coordinates of
Tssr37359 1383 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs234067905
MGI SNP Detail
Chr4:57566747 Pakap within coordinates of
Tssr37359 1374 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs27838396
MGI SNP Detail
Chr4:57566765 Pakap within coordinates of
Tssr37359 1356 bp upstream
SNP C/T T C C C C C C C C T T T
rs219566760
MGI SNP Detail
Chr4:57566787 Pakap within coordinates of
Tssr37359 1334 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs236722150
MGI SNP Detail
Chr4:57566802 Pakap within coordinates of
Tssr37359 1319 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs256626626
MGI SNP Detail
Chr4:57566811 Pakap within coordinates of
Tssr37359 1310 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs222615383
MGI SNP Detail
Chr4:57566818 Pakap within coordinates of
Tssr37359 1303 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs233002893
MGI SNP Detail
Chr4:57566828 Pakap within coordinates of
Tssr37359 1293 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T C T T T T
rs252889932
MGI SNP Detail
Chr4:57566896 Pakap within coordinates of
Tssr37359 1225 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs222079215
MGI SNP Detail
Chr4:57566904 Pakap within coordinates of
Tssr37359 1217 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs242137418
MGI SNP Detail
Chr4:57566983 Pakap within coordinates of
Tssr37359 1138 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T G T T G T T T T G T T T T T G T T T T T T G T T T T T T T T T T T T
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264159179
MGI SNP Detail
Chr4:57567016 Pakap within coordinates of
Tssr37359 1105 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T C T T T T T T C T T T T T T T T T T T T
rs220167115
MGI SNP Detail
Chr4:57567080 Pakap within coordinates of
Tssr37359 1041 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs244867518
MGI SNP Detail
Chr4:57567197 Pakap within coordinates of
Tssr37359 924 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262379855
MGI SNP Detail
Chr4:57567204 Pakap within coordinates of
Tssr37359 917 bp upstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs580814740
MGI SNP Detail
Chr4:57567268 Pakap within coordinates of
Tssr37359 853 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs231114258
MGI SNP Detail
Chr4:57567402 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 719 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs238903308
MGI SNP Detail
Chr4:57567420 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 701 bp upstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs257711178
MGI SNP Detail
Chr4:57567421 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 700 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs228139488
MGI SNP Detail
Chr4:57567567 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 554 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs6311526
MGI SNP Detail
Chr4:57568034 Cpgi14331 within coordinates of
Pakap within coordinates of
Rr101053 within coordinates of
Tssr37358 within coordinates of
Tssr37359 87 bp upstream
SNP C/T T C
rs219447411
MGI SNP Detail
Chr4:57568079 Cpgi14331 within coordinates of
Pakap within coordinates of
Rr101053 within coordinates of
Tssr37358 within coordinates of
Tssr37359 42 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585069879
MGI SNP Detail
Chr4:57568133 Cpgi14331 within coordinates of
Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 within coordinates of
SNP C/G C C C C C C C C C C C C C C C C C C G C C C C C C C G C C C C C C C C C C C C C C C C C C C C C C C C
rs228057494
MGI SNP Detail
Chr4:57568176 Cpgi14331 within coordinates of
Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 40 bp downstream
SNP A/T A A A A A A A A A A A A A A A A T A A A A A A A T A A A A A A A A A A A T A A A A A A A A A A A A
rs254534338
MGI SNP Detail
Chr4:57568192 Cpgi14331 within coordinates of
Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 56 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G
rs6312550
MGI SNP Detail
Chr4:57568201 Cpgi14331 within coordinates of
Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 65 bp downstream
SNP C/G G C
rs6312619
MGI SNP Detail
Chr4:57568247 Cpgi14331 within coordinates of
Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 111 bp downstream
SNP C/G C G
rs214297049
MGI SNP Detail
Chr4:57568264 Cpgi14331 within coordinates of
Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 128 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C C T C C C C C C T C C C C C C C C C C C C
rs233315328
MGI SNP Detail
Chr4:57568549 Cpgi14331 within coordinates of
Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 413 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs252932025
MGI SNP Detail
Chr4:57568553 Cpgi14331 within coordinates of
Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 417 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs215961460
MGI SNP Detail
Chr4:57568554 Cpgi14331 within coordinates of
Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 418 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C A C C C C C A C C C C C C A C C C C C C C C C C C C
rs578993933
MGI SNP Detail
Chr4:57568687 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 551 bp downstream
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs235693960
MGI SNP Detail
Chr4:57568787 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 651 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs261052053
MGI SNP Detail
Chr4:57568820 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 684 bp downstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220314750
MGI SNP Detail
Chr4:57569125 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 989 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G G A G G G G G G A G G G G G G G G G G G G
rs242077491
MGI SNP Detail
Chr4:57569269 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 1133 bp downstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27838395
MGI SNP Detail
Chr4:57569292 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 1156 bp downstream
SNP A/G G G G G G G A G G G A G G A G
rs27838394
MGI SNP Detail
Chr4:57569439 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 1303 bp downstream
SNP C/T T T T T T T C T T T C T T C T
rs27838393
MGI SNP Detail
Chr4:57569497 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 1361 bp downstream
SNP G/T T T T T T T G T T T G T T G T
rs257749571
MGI SNP Detail
Chr4:57569613 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 1477 bp downstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs227956234
MGI SNP Detail
Chr4:57569645 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 1509 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27838392
MGI SNP Detail
Chr4:57569659 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 1523 bp downstream
SNP C/T C C C C C C T C C C T C C T C
rs261365966
MGI SNP Detail
Chr4:57569661 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 1525 bp downstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs27838391
MGI SNP Detail
Chr4:57569698 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 1562 bp downstream
SNP G/T G G G G G G T G G G T G G T G
rs250200219
MGI SNP Detail
Chr4:57569749 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 1613 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27838390
MGI SNP Detail
Chr4:57569768 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 1632 bp downstream
SNP A/G G G G G G G A G G G A G G A G
rs226970406
MGI SNP Detail
Chr4:57569801 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 1665 bp downstream
SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs27838389
MGI SNP Detail
Chr4:57569804 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 1668 bp downstream
SNP C/T C C C C C C T C C C T C C T C
rs216277433
MGI SNP Detail
Chr4:57569827 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 1691 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27838388
MGI SNP Detail
Chr4:57569842 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 1706 bp downstream
SNP A/G G G G G G G A G G G A G G A G
rs27838387
MGI SNP Detail
Chr4:57569904 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 1768 bp downstream
SNP A/G G G G G G G A G G G A G G A G
rs212225570
MGI SNP Detail
Chr4:57569922 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 1786 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237382118
MGI SNP Detail
Chr4:57569988 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 1852 bp downstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27838386
MGI SNP Detail
Chr4:57570074 Pakap within coordinates of
Rr101053 within coordinates of
Tssr37359 1938 bp downstream
SNP C/T T T T T T T C T T T C T T C T
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Showing SNP(s) 1 - 68 of 68

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory