About   Help   FAQ
Mouse SNP Summary
Symbol
Name
ID
Tssr37903
transcription start site region 37903
MGI:5965670

<< first < prev1 next > last >>
Showing SNP(s) 1 - 62 of 62

Your search exceeds the maximum result limit of 100,000 SNPs that can be displayed or exported to text. Use filters to refine your search or select a sub-region from the SNP Density Heatmap.
Loading...
Show only selected strains with alleles     Show all selected strains    
Drag columns to re-order.   Column order is reset with Filter or Show option change.
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs263751752
MGI SNP Detail
Chr4:98809995 Tssr37903 1966 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs224962943
MGI SNP Detail
Chr4:98810009 Tssr37903 1952 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs247620482
MGI SNP Detail
Chr4:98810058 Tssr37903 1903 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs251922793
MGI SNP Detail
Chr4:98810165 Tssr37903 1796 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs28306349
MGI SNP Detail
Chr4:98810186 Tssr37903 1775 bp upstream
SNP A/T T T T T T T T T T T T T A A
rs28306348
MGI SNP Detail
Chr4:98810207 Tssr37903 1754 bp upstream
SNP A/G A A A A G A A A A A A G G G
rs256847525
MGI SNP Detail
Chr4:98810223 Tssr37903 1738 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C
rs228333665
MGI SNP Detail
Chr4:98810228 Tssr37903 1733 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs248734842
MGI SNP Detail
Chr4:98810231 Tssr37903 1730 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs266014973
MGI SNP Detail
Chr4:98810305 Tssr37903 1656 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs225715611
MGI SNP Detail
Chr4:98810397 Tssr37903 1564 bp upstream
SNP A/G A G
rs246122277
MGI SNP Detail
Chr4:98810602 Tssr37903 1359 bp upstream
SNP G/T G T
rs31799323
MGI SNP Detail
Chr4:98810666 Tssr37903 1295 bp upstream
SNP A/T T A A
rs32119058
MGI SNP Detail
Chr4:98810667 Tssr37903 1294 bp upstream
SNP A/T T A A
rs242905742
MGI SNP Detail
Chr4:98810734 Tssr37903 1227 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs259958271
MGI SNP Detail
Chr4:98810858 Tssr37903 1103 bp upstream
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs217076402
MGI SNP Detail
Chr4:98810892 Tssr37903 1069 bp upstream
SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs584695485
MGI SNP Detail
Chr4:98810904 Tssr37903 1057 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T C T T T T T T T T T T T T
rs252566278
MGI SNP Detail
Chr4:98810909 Tssr37903 1052 bp upstream
SNP C/T C T
rs32100981
MGI SNP Detail
Chr4:98810951 Tssr37903 1010 bp upstream
SNP A/C C A A
rs219496289
MGI SNP Detail
Chr4:98810952 Tssr37903 1009 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239051950
MGI SNP Detail
Chr4:98810988 Cpgi14474 within coordinates of
Tssr37903 973 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs48909596
MGI SNP Detail
Chr4:98811060 Cpgi14474 within coordinates of
Tssr37903 901 bp upstream
SNP C/T C T T
rs220674064
MGI SNP Detail
Chr4:98811090 Cpgi14474 within coordinates of
Tssr37903 871 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs251374766
MGI SNP Detail
Chr4:98811164 Cpgi14474 within coordinates of
Tssr37903 797 bp upstream
SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs264060607
MGI SNP Detail
Chr4:98811165 Cpgi14474 within coordinates of
Tssr37901 within coordinates of
Tssr37903 796 bp upstream
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs578995727
MGI SNP Detail
Chr4:98811246 Cpgi14474 within coordinates of
Tssr37903 715 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G C G G G G G G G G G G G G
rs220045953
MGI SNP Detail
Chr4:98811247 Cpgi14474 within coordinates of
Tssr37903 714 bp upstream
SNP A/G A G
rs239644514
MGI SNP Detail
Chr4:98811251 Cpgi14474 within coordinates of
Tssr37903 710 bp upstream
SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A T A A A A A A A T A A A A
rs256627835
MGI SNP Detail
Chr4:98811274 Cpgi14474 within coordinates of
Tssr37903 687 bp upstream
SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs225630429
MGI SNP Detail
Chr4:98811286 Cpgi14474 within coordinates of
Tssr37903 675 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs239206555
MGI SNP Detail
Chr4:98811358 Cpgi14474 within coordinates of
Tssr37903 603 bp upstream
SNP C/G G C
rs582199758
MGI SNP Detail
Chr4:98811362 Cpgi14474 within coordinates of
Tssr37903 599 bp upstream
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs211812044
MGI SNP Detail
Chr4:98811417 Cpgi14474 within coordinates of
Tssr37903 544 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs233654673
MGI SNP Detail
Chr4:98811424 Cpgi14474 within coordinates of
Tssr37903 537 bp upstream
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs258797135
MGI SNP Detail
Chr4:98811497 Cpgi14474 within coordinates of
Rr398351 within coordinates of
Tssr37903 464 bp upstream
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs216341292
MGI SNP Detail
Chr4:98811585 Cpgi14474 within coordinates of
Rr398351 within coordinates of
Tssr37903 376 bp upstream
SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs239932994
MGI SNP Detail
Chr4:98812292 Cpgi14474 within coordinates of
Tssr37903 312 bp downstream
Usp1 within coordinates of
SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs585644152
MGI SNP Detail
Chr4:98812399 Cpgi14474 within coordinates of
Tssr37903 419 bp downstream
Usp1 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs257030556
MGI SNP Detail
Chr4:98812490 Cpgi14474 within coordinates of
Tssr37903 510 bp downstream
Usp1 within coordinates of
SNP A/G G A
rs213519804
MGI SNP Detail
Chr4:98812491 Cpgi14474 within coordinates of
Tssr37903 511 bp downstream
Usp1 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230454448
MGI SNP Detail
Chr4:98812576 Cpgi14474 within coordinates of
Tssr37903 596 bp downstream
Usp1 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs249506884
MGI SNP Detail
Chr4:98812610 Cpgi14474 within coordinates of
Tssr37903 630 bp downstream
Usp1 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220269765
MGI SNP Detail
Chr4:98812786 Cpgi14474 within coordinates of
Tssr37903 806 bp downstream
Usp1 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A C A A A A C A A A A A A A A A A A A C A A A A A A A A A A A A
rs240508144
MGI SNP Detail
Chr4:98812867 Cpgi14474 within coordinates of
Tssr37903 887 bp downstream
Usp1 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263786307
MGI SNP Detail
Chr4:98812872 Cpgi14474 within coordinates of
Tssr37903 892 bp downstream
Usp1 within coordinates of
SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs225095943
MGI SNP Detail
Chr4:98812923 Cpgi14474 within coordinates of
Tssr37903 943 bp downstream
Usp1 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs239580247
MGI SNP Detail
Chr4:98813074 Cpgi14474 within coordinates of
Tssr37903 1094 bp downstream
Usp1 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs256702224
MGI SNP Detail
Chr4:98813106 Cpgi14474 within coordinates of
Tssr37903 1126 bp downstream
Usp1 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs579679900
MGI SNP Detail
Chr4:98813333 Tssr37903 1353 bp downstream
Usp1 within coordinates of
SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)
Map Position
(GRCm39)
Gene & Category Variation
Type
Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219710882
MGI SNP Detail
Chr4:98813366 Tssr37903 1386 bp downstream
Usp1 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs228163384
MGI SNP Detail
Chr4:98813371 Tssr37903 1391 bp downstream
Usp1 within coordinates of
SNP A/G G A
rs236922971
MGI SNP Detail
Chr4:98813420 Tssr37903 1440 bp downstream
Usp1 within coordinates of
SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs261682365
MGI SNP Detail
Chr4:98813527 Tssr37903 1547 bp downstream
Usp1 within coordinates of
SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs581891929
MGI SNP Detail
Chr4:98813549 Tssr37903 1569 bp downstream
Usp1 within coordinates of
SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C A C C C C C C C C C C C C A C C C C C C C C C C C C
rs251805555
MGI SNP Detail
Chr4:98813550 Tssr37903 1570 bp downstream
Usp1 within coordinates of
SNP C/G G C
rs253756563
MGI SNP Detail
Chr4:98813556 Tssr37903 1576 bp downstream
Usp1 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G G G A G G G G G G G A G G G G
rs265623324
MGI SNP Detail
Chr4:98813632 Tssr37903 1652 bp downstream
Usp1 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C C C T C C C C C C C C C C C C
rs227072160
MGI SNP Detail
Chr4:98813646 Tssr37903 1666 bp downstream
Usp1 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs245453265
MGI SNP Detail
Chr4:98813725 Tssr37903 1745 bp downstream
Usp1 within coordinates of
SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs213597387
MGI SNP Detail
Chr4:98813763 Tssr37903 1783 bp downstream
Usp1 within coordinates of
SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs230574296
MGI SNP Detail
Chr4:98813794 Tssr37903 1814 bp downstream
Usp1 within coordinates of
SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
<< first < prev1 next > last >>
Showing SNP(s) 1 - 62 of 62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
12/10/2024
MGI 6.24
The Jackson Laboratory