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Mouse SNP Summary
Symbol
Name
ID 		Tssr38375
transcription start site region 38375
MGI:5966142

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Showing SNP(s) 1 - 53 of 53

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs216688120
MGI SNP Detail		 Chr4:110444720 Agbl4 within coordinates of
Rr377006 within coordinates of
Tssr38375 1891 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs28304960
MGI SNP Detail		 Chr4:110444774 Agbl4 within coordinates of
Rr377006 within coordinates of
Tssr38375 1837 bp upstream
 SNP C/T C C C C C C T C C C C C C
rs249572642
MGI SNP Detail		 Chr4:110444936 Agbl4 within coordinates of
Rr377006 within coordinates of
Tssr38375 1675 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223253532
MGI SNP Detail		 Chr4:110445112 Agbl4 within coordinates of
Rr377006 within coordinates of
Tssr38375 1499 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs254497022
MGI SNP Detail		 Chr4:110445153 Agbl4 within coordinates of
Rr377006 within coordinates of
Tssr38375 1458 bp upstream
 SNP C/T T C
rs263481249
MGI SNP Detail		 Chr4:110445161 Agbl4 within coordinates of
Rr377006 within coordinates of
Tssr38375 1450 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs224337391
MGI SNP Detail		 Chr4:110445240 Agbl4 within coordinates of
Rr377006 within coordinates of
Tssr38375 1371 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs251745028
MGI SNP Detail		 Chr4:110445357 Agbl4 within coordinates of
Tssr38375 1254 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs259303143
MGI SNP Detail		 Chr4:110445361 Agbl4 within coordinates of
Tssr38375 1250 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs45733821
MGI SNP Detail		 Chr4:110445432 Agbl4 within coordinates of
Tssr38375 1179 bp upstream
 SNP A/G A A A G
rs236290914
MGI SNP Detail		 Chr4:110445635 Agbl4 within coordinates of
Tssr38375 976 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs256746410
MGI SNP Detail		 Chr4:110445753 Agbl4 within coordinates of
Tssr38375 858 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs230825001
MGI SNP Detail		 Chr4:110445793 Agbl4 within coordinates of
Tssr38375 818 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs32876556
MGI SNP Detail		 Chr4:110445830 Agbl4 within coordinates of
Tssr38375 781 bp upstream
 SNP G/T T T G T
rs216907765
MGI SNP Detail		 Chr4:110445889 Agbl4 within coordinates of
Tssr38375 722 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs51043228
MGI SNP Detail		 Chr4:110445976 Agbl4 within coordinates of
Tssr38375 635 bp upstream
 SNP C/T T C
rs28304959
MGI SNP Detail		 Chr4:110446085 Agbl4 within coordinates of
Tssr38375 526 bp upstream
 SNP C/G G G G G G G C G G G G G G
rs216605928
MGI SNP Detail		 Chr4:110446173 Agbl4 within coordinates of
Tssr38375 438 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs230464112
MGI SNP Detail		 Chr4:110446211 Agbl4 within coordinates of
Tssr38375 400 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs249630636
MGI SNP Detail		 Chr4:110446333 Agbl4 within coordinates of
Tssr38375 278 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs214722916
MGI SNP Detail		 Chr4:110446385 Agbl4 within coordinates of
Tssr38375 226 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs238170800
MGI SNP Detail		 Chr4:110446414 Agbl4 within coordinates of
Tssr38375 197 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs259493725
MGI SNP Detail		 Chr4:110446446 Agbl4 within coordinates of
Tssr38375 165 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs224448120
MGI SNP Detail		 Chr4:110446545 Agbl4 within coordinates of
Tssr38375 66 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs235321441
MGI SNP Detail		 Chr4:110446550 Agbl4 within coordinates of
Tssr38375 61 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs252739321
MGI SNP Detail		 Chr4:110446614 Agbl4 within coordinates of
Tssr38375 within coordinates of
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265920949
MGI SNP Detail		 Chr4:110446722 Agbl4 within coordinates of
Tssr38375 108 bp downstream
 SNP C/T C T
rs236142420
MGI SNP Detail		 Chr4:110446723 Agbl4 within coordinates of
Tssr38375 109 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs265393002
MGI SNP Detail		 Chr4:110446728 Agbl4 within coordinates of
Tssr38375 114 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs222884430
MGI SNP Detail		 Chr4:110446902 Agbl4 within coordinates of
Tssr38375 288 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs245611320
MGI SNP Detail		 Chr4:110446961 Agbl4 within coordinates of
Tssr38375 347 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs263391940
MGI SNP Detail		 Chr4:110447056 Agbl4 within coordinates of
Tssr38375 442 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs585259464
MGI SNP Detail		 Chr4:110447311 Agbl4 within coordinates of
Tssr38375 697 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs231726820
MGI SNP Detail		 Chr4:110447312 Agbl4 within coordinates of
Tssr38375 698 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs581078861
MGI SNP Detail		 Chr4:110447489 Agbl4 within coordinates of
Tssr38375 875 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs583283950
MGI SNP Detail		 Chr4:110447493 Agbl4 within coordinates of
Tssr38375 879 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs248602533
MGI SNP Detail		 Chr4:110447538 Agbl4 within coordinates of
Tssr38375 924 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs260443162
MGI SNP Detail		 Chr4:110447587 Agbl4 within coordinates of
Tssr38375 973 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs233141555
MGI SNP Detail		 Chr4:110447625 Agbl4 within coordinates of
Tssr38375 1011 bp downstream
 SNP G/T G T
rs243367031
MGI SNP Detail		 Chr4:110447666 Agbl4 within coordinates of
Tssr38375 1052 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs215117128
MGI SNP Detail		 Chr4:110447782 Agbl4 within coordinates of
Tssr38375 1168 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs258375625
MGI SNP Detail		 Chr4:110447793 Agbl4 within coordinates of
Tssr38375 1179 bp downstream
 SNP A/G G A
rs236163685
MGI SNP Detail		 Chr4:110447839 Agbl4 within coordinates of
Tssr38375 1225 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs258369735
MGI SNP Detail		 Chr4:110447862 Agbl4 within coordinates of
Tssr38375 1248 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs215861109
MGI SNP Detail		 Chr4:110447957 Agbl4 within coordinates of
Tssr38375 1343 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs235242811
MGI SNP Detail		 Chr4:110448033 Agbl4 within coordinates of
Tssr38375 1419 bp downstream
 SNP A/G G G G A G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs252778374
MGI SNP Detail		 Chr4:110448133 Agbl4 within coordinates of
Tssr38375 1519 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs218781431
MGI SNP Detail		 Chr4:110448209 Agbl4 within coordinates of
Tssr38375 1595 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs230250583
MGI SNP Detail		 Chr4:110448253 Agbl4 within coordinates of
Tssr38375 1639 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs215315933
MGI SNP Detail		 Chr4:110448279 Agbl4 within coordinates of
Tssr38375 1665 bp downstream
 SNP A/G G A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs222646042
MGI SNP Detail		 Chr4:110448301 Agbl4 within coordinates of
Tssr38375 1687 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246921874
MGI SNP Detail		 Chr4:110448427 Agbl4 within coordinates of
Tssr38375 1813 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs28304958
MGI SNP Detail		 Chr4:110448564 Agbl4 within coordinates of
Tssr38375 1950 bp downstream
 SNP A/T A A A A A A T A A A A A A
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Showing SNP(s) 1 - 53 of 53
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory