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Mouse SNP Summary
Symbol
Name
ID 		Tssr39022
transcription start site region 39022
MGI:5966789

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Showing SNP(s) 1 - 73 of 73

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs260847262
MGI SNP Detail		 Chr4:126648832 AU040320 within coordinates of
Tssr39022 1967 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs220057513
MGI SNP Detail		 Chr4:126648841 AU040320 within coordinates of
Tssr39022 1958 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs235462024
MGI SNP Detail		 Chr4:126648965 AU040320 within coordinates of
Tssr39022 1834 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27549378
MGI SNP Detail		 Chr4:126649143 AU040320 within coordinates of
Tssr39022 1656 bp upstream
 SNP C/G C C C C C C C C C G C C C
rs219984236
MGI SNP Detail		 Chr4:126649264 AU040320 within coordinates of
Tssr39022 1535 bp upstream
 SNP C/T T T T T T C C T C C C T T T T T C C C C C T T T T T T C C T T T C C C T C C T C C T C
rs238929278
MGI SNP Detail		 Chr4:126649288 AU040320 within coordinates of
Tssr39022 1511 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257863982
MGI SNP Detail		 Chr4:126649297 AU040320 within coordinates of
Tssr39022 1502 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27549377
MGI SNP Detail		 Chr4:126649375 AU040320 within coordinates of
Tssr39022 1424 bp upstream
 SNP A/C A A A A A A A A A C A A A
rs250787342
MGI SNP Detail		 Chr4:126649376 AU040320 within coordinates of
Tssr39022 1423 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs261271581
MGI SNP Detail		 Chr4:126649464 AU040320 within coordinates of
Tssr39022 1335 bp upstream
 SNP G/T T T T T T T G G T G G G T T T T T T T T G G T G G G T T T T T T T T T G T T T G T G G T T T G T T G G T T
rs228719126
MGI SNP Detail		 Chr4:126649508 AU040320 within coordinates of
Tssr39022 1291 bp upstream
 SNP C/T C C C C C T C C C C C C T T C C C C C T C C T C C C C T C C C C C T C C C C C C T C C C T C C C T C C C C
rs250316602
MGI SNP Detail		 Chr4:126649577 AU040320 within coordinates of
Tssr39022 1222 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs257763762
MGI SNP Detail		 Chr4:126649599 AU040320 within coordinates of
Tssr39022 1200 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226842325
MGI SNP Detail		 Chr4:126649634 AU040320 within coordinates of
Tssr39022 1165 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs246635197
MGI SNP Detail		 Chr4:126649670 AU040320 within coordinates of
Tssr39022 1129 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs581683731
MGI SNP Detail		 Chr4:126649703 AU040320 within coordinates of
Tssr39022 1096 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs585091840
MGI SNP Detail		 Chr4:126649704 AU040320 within coordinates of
Tssr39022 1095 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs216101277
MGI SNP Detail		 Chr4:126649715 AU040320 within coordinates of
Tssr39022 1084 bp upstream
 SNP A/G A A A A A G A A A A A A G G A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A G A A A G A A A A
rs239697979
MGI SNP Detail		 Chr4:126649731 AU040320 within coordinates of
Tssr39022 1068 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G
rs260276524
MGI SNP Detail		 Chr4:126649787 AU040320 within coordinates of
Tssr39022 1012 bp upstream
 SNP C/G G G G G G C G G G G G G C C G G G G G C G G C G G G G C G G G G G C G G G G G G C G G G C G G G G G G G G
rs212146336
MGI SNP Detail		 Chr4:126649943 AU040320 within coordinates of
Tssr39022 856 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs27549376
MGI SNP Detail		 Chr4:126649945 AU040320 within coordinates of
Tssr39022 854 bp upstream
 SNP A/T T T T T T T T T T A T T T
rs27549375
MGI SNP Detail		 Chr4:126650104 AU040320 within coordinates of
Tssr39022 695 bp upstream
 SNP A/T T T T T T T T A T T T
rs27549374
MGI SNP Detail		 Chr4:126650181 AU040320 within coordinates of
Tssr39022 618 bp upstream
 SNP A/G G G G G G G G G G G A G G G
rs257056378
MGI SNP Detail		 Chr4:126650219 AU040320 within coordinates of
Tssr39022 580 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs219919263
MGI SNP Detail		 Chr4:126650233 AU040320 within coordinates of
Tssr39022 566 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G A G G G G
rs232755191
MGI SNP Detail		 Chr4:126650241 AU040320 within coordinates of
Tssr39022 558 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs251725226
MGI SNP Detail		 Chr4:126650325 AU040320 within coordinates of
Tssr39022 474 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs221801781
MGI SNP Detail		 Chr4:126650371 AU040320 within coordinates of
Tssr39020 within coordinates of
Tssr39022 428 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A
rs248157343
MGI SNP Detail		 Chr4:126650423 AU040320 within coordinates of
Tssr39022 376 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27549373
MGI SNP Detail		 Chr4:126650467 AU040320 within coordinates of
Tssr39022 332 bp upstream
 SNP C/T C C C C C C C C C T C C C
rs221060668
MGI SNP Detail		 Chr4:126650475 AU040320 within coordinates of
Tssr39022 324 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs245422942
MGI SNP Detail		 Chr4:126650704 AU040320 within coordinates of
Tssr39022 95 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs47125202
MGI SNP Detail		 Chr4:126650922 AU040320 within coordinates of
Tssr39022 116 bp downstream
 SNP C/T T T C
rs226795518
MGI SNP Detail		 Chr4:126650923 AU040320 within coordinates of
Tssr39022 117 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs240766393
MGI SNP Detail		 Chr4:126651034 AU040320 within coordinates of
Tssr39022 228 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs260225242
MGI SNP Detail		 Chr4:126651050 AU040320 within coordinates of
Tssr39022 244 bp downstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs579312890
MGI SNP Detail		 Chr4:126651127 AU040320 within coordinates of
Tssr39022 321 bp downstream
 SNP G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs240733737
MGI SNP Detail		 Chr4:126651383 AU040320 within coordinates of
Tssr39022 577 bp downstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs254916118
MGI SNP Detail		 Chr4:126651429 AU040320 within coordinates of
Tssr39022 623 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27549372
MGI SNP Detail		 Chr4:126651479 AU040320 within coordinates of
Tssr39022 673 bp downstream
 SNP A/G A A A A A A A A A G A A A
rs212282062
MGI SNP Detail		 Chr4:126651579 AU040320 within coordinates of
Tssr39022 773 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
rs228884567
MGI SNP Detail		 Chr4:126651630 AU040320 within coordinates of
Tssr39022 824 bp downstream
 SNP C/G G G G G G C G G G G G G C C G G G G G G G G G G G G G C G G G G G C G G G G G G G G G G C G G G C G G G G
rs243775636
MGI SNP Detail		 Chr4:126651645 AU040320 within coordinates of
Tssr39022 839 bp downstream
 SNP A/G G G G G G A G G G G G G A A G G G G G G G G G G G G G A G G G G G A G G G G G G G G G G A G G G A G G G G
rs214400982
MGI SNP Detail		 Chr4:126651663 AU040320 within coordinates of
Tssr39022 857 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs31847336
MGI SNP Detail		 Chr4:126651686 AU040320 within coordinates of
Tssr39022 880 bp downstream
 SNP C/T T T T C
rs251830850
MGI SNP Detail		 Chr4:126651722 AU040320 within coordinates of
Tssr39022 916 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs216595156
MGI SNP Detail		 Chr4:126651749 AU040320 within coordinates of
Tssr39022 943 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs27549371
MGI SNP Detail		 Chr4:126651759 AU040320 within coordinates of
Tssr39022 953 bp downstream
 SNP C/T C C C C C C C C C T C C C
rs242727822
MGI SNP Detail		 Chr4:126651781 AU040320 within coordinates of
Tssr39022 975 bp downstream
 SNP A/G A A A A A G A A A A A A G G A A A A A G A A G A A A A G A A A A A G A A A A A A G A A A G A A A G A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255291856
MGI SNP Detail		 Chr4:126651862 AU040320 within coordinates of
Tssr39022 1056 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs220632464
MGI SNP Detail		 Chr4:126651877 AU040320 within coordinates of
Tssr39022 1071 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs242769741
MGI SNP Detail		 Chr4:126651910 AU040320 within coordinates of
Tssr39022 1104 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G
rs581708835
MGI SNP Detail		 Chr4:126652010 AU040320 within coordinates of
Tssr39022 1204 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G C G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs585493433
MGI SNP Detail		 Chr4:126652023 AU040320 within coordinates of
Tssr39022 1217 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs33015364
MGI SNP Detail		 Chr4:126652067 AU040320 within coordinates of
Tssr39022 1261 bp downstream
 SNP A/G A A A G
rs220619777
MGI SNP Detail		 Chr4:126652140 AU040320 within coordinates of
Tssr39022 1334 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27549370
MGI SNP Detail		 Chr4:126652191 AU040320 within coordinates of
Tssr39022 1385 bp downstream
 SNP C/T C C C C C C C C C T C C C
rs260188129
MGI SNP Detail		 Chr4:126652202 AU040320 within coordinates of
Tssr39022 1396 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27549369
MGI SNP Detail		 Chr4:126652236 AU040320 within coordinates of
Tssr39022 1430 bp downstream
 SNP C/T T T T T T T T T T C T T T
rs251548974
MGI SNP Detail		 Chr4:126652274 AU040320 within coordinates of
Tssr39022 1468 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs261635486
MGI SNP Detail		 Chr4:126652299 AU040320 within coordinates of
Tssr39022 1493 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T A T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T
rs229291475
MGI SNP Detail		 Chr4:126652380 AU040320 within coordinates of
Tssr39022 1574 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243880944
MGI SNP Detail		 Chr4:126652404 AU040320 within coordinates of
Tssr39022 1598 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs214508938
MGI SNP Detail		 Chr4:126652406 AU040320 within coordinates of
Tssr39022 1600 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs226816484
MGI SNP Detail		 Chr4:126652411 AU040320 within coordinates of
Tssr39022 1605 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G
rs27549368
MGI SNP Detail		 Chr4:126652452 AU040320 within coordinates of
Tssr39022 1646 bp downstream
 SNP C/T T T T T C T C C C T C T T T
rs27549367
MGI SNP Detail		 Chr4:126652564 AU040320 within coordinates of
Tssr39022 1758 bp downstream
 SNP C/T C C C C C C C C C C C T C C
rs240200754
MGI SNP Detail		 Chr4:126652606 AU040320 within coordinates of
Tssr39022 1800 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs260680259
MGI SNP Detail		 Chr4:126652613 AU040320 within coordinates of
Tssr39022 1807 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs32490478
MGI SNP Detail		 Chr4:126652723 AU040320 within coordinates of
Tssr39022 1917 bp downstream
 SNP A/T T T A
rs31947478
MGI SNP Detail		 Chr4:126652725 AU040320 within coordinates of
Tssr39022 1919 bp downstream
 SNP A/G G G A
rs212576898
MGI SNP Detail		 Chr4:126652748 AU040320 within coordinates of
Tssr39022 1942 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C
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Showing SNP(s) 1 - 73 of 73
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory
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