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Mouse SNP Summary
Symbol
Name
ID 		Tssr39272
transcription start site region 39272
MGI:5967039

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Showing SNP(s) 1 - 37 of 37

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs27590041
MGI SNP Detail		 Chr4:130544316 Sdc3 within coordinates of
Tssr39272 1783 bp upstream
 SNP A/C C C C C C C A C C C C C C C C
rs27590040
MGI SNP Detail		 Chr4:130544430 Sdc3 within coordinates of
Tssr39272 1669 bp upstream
 SNP A/G G G G G G G A G G G G G G G G
rs240301191
MGI SNP Detail		 Chr4:130544602 Sdc3 within coordinates of
Tssr39272 1497 bp upstream
 SNP A/G A G
rs27590039
MGI SNP Detail		 Chr4:130544859 Sdc3 within coordinates of
Tssr39272 1240 bp upstream
 SNP A/G A A A A A A A A G A G A A G A
rs27590038
MGI SNP Detail		 Chr4:130544865 Sdc3 within coordinates of
Tssr39272 1234 bp upstream
 SNP G/T G G G G G G T G G T G T G G T G
rs232558292
MGI SNP Detail		 Chr4:130545141 Sdc3 within coordinates of
Tssr39272 958 bp upstream
 SNP A/C A C
rs250301620
MGI SNP Detail		 Chr4:130545142 Sdc3 within coordinates of
Tssr39272 957 bp upstream
 SNP A/G G A
rs222323639
MGI SNP Detail		 Chr4:130545201 Sdc3 within coordinates of
Tssr39272 898 bp upstream
 SNP C/T C T
rs244727746
MGI SNP Detail		 Chr4:130545224 Sdc3 within coordinates of
Tssr39272 875 bp upstream
 SNP C/T C T
rs256582490
MGI SNP Detail		 Chr4:130545329 Sdc3 within coordinates of
Tssr39272 770 bp upstream
 SNP A/C C A
rs27590037
MGI SNP Detail		 Chr4:130545354 Sdc3 within coordinates of
Tssr39272 745 bp upstream
 SNP G/T T T T T T T G T T G T G T T G G T
rs27590036
MGI SNP Detail		 Chr4:130545454 Sdc3 within coordinates of
Tssr39272 645 bp upstream
 SNP A/G G G G G G G G G G A G G G G G
rs27590035
MGI SNP Detail		 Chr4:130545516 Sdc3 within coordinates of
Tssr39272 583 bp upstream
 SNP A/T A A A A A A A A A T A T A A T T A
rs27590034
MGI SNP Detail		 Chr4:130545602 Sdc3 within coordinates of
Tssr39272 497 bp upstream
 SNP C/T T T T T T T C T T T C T T C C T
rs27590033
MGI SNP Detail		 Chr4:130545711 Sdc3 within coordinates of
Tssr39272 388 bp upstream
 SNP C/T C C C C C C T C C T C T C C T T C
rs48843456
MGI SNP Detail		 Chr4:130545798 Sdc3 within coordinates of
Tssr39272 301 bp upstream
 SNP G/T T T T G
rs27590032
MGI SNP Detail		 Chr4:130546011 Sdc3 within coordinates of
Tssr39272 88 bp upstream
Tssr43599 within coordinates of
 SNP A/G A A A A A A G A A G A G A A G G A
rs27590031
MGI SNP Detail		 Chr4:130546406 Sdc3 within coordinates of
Tssr39272 291 bp downstream
 SNP C/T C C C C C C C C C T T C C T C
rs27590030
MGI SNP Detail		 Chr4:130546426 Sdc3 within coordinates of
Tssr39272 311 bp downstream
 SNP C/T C C C C C C T C C C C C C C C
rs27590029
MGI SNP Detail		 Chr4:130546457 Sdc3 within coordinates of
Tssr39272 342 bp downstream
 SNP C/T C C C C C C C C C C C C T C
rs230233014
MGI SNP Detail		 Chr4:130546476 Sdc3 within coordinates of
Tssr39272 361 bp downstream
 SNP A/G A G
rs254369871
MGI SNP Detail		 Chr4:130546502 Sdc3 within coordinates of
Tssr39272 387 bp downstream
 SNP C/T C T
rs27590028
MGI SNP Detail		 Chr4:130546950 Sdc3 within coordinates of
Tssr39272 835 bp downstream
 SNP A/T T T T T T T A T T T A A T T A T
rs27590027
MGI SNP Detail		 Chr4:130546953 Sdc3 within coordinates of
Tssr39272 838 bp downstream
 SNP C/T C C C C C C C C T C T C C C
rs229074301
MGI SNP Detail		 Chr4:130547079 Sdc3 within coordinates of
Tssr39272 964 bp downstream
 SNP C/T C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
129X1/SvJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs246718006
MGI SNP Detail		 Chr4:130547175 Sdc3 within coordinates of
Tssr39272 1060 bp downstream
 SNP A/G G A
rs27590026
MGI SNP Detail		 Chr4:130547207 Sdc3 within coordinates of
Tssr39272 1092 bp downstream
 SNP C/T T T T T T T C T T T T T T T T C T
rs27590025
MGI SNP Detail		 Chr4:130547351 Sdc3 within coordinates of
Tssr39272 1236 bp downstream
 SNP C/T T T T T T T C T T T T T T T T C T
rs250196779
MGI SNP Detail		 Chr4:130547364 Sdc3 within coordinates of
Tssr39272 1249 bp downstream
 SNP C/T C T
rs27590024
MGI SNP Detail		 Chr4:130547423 Sdc3 within coordinates of
Tssr39272 1308 bp downstream
 SNP C/T T T T T T T C T T T T T T T T
rs27590023
MGI SNP Detail		 Chr4:130547445 Sdc3 within coordinates of
Tssr39272 1330 bp downstream
 SNP C/T T T T T T T T T T C C T T C T
rs213783414
MGI SNP Detail		 Chr4:130547540 Sdc3 within coordinates of
Tssr39272 1425 bp downstream
 SNP C/T T C
rs235278858
MGI SNP Detail		 Chr4:130547714 Sdc3 within coordinates of
Tssr39272 1599 bp downstream
 SNP C/T T C
rs260666073
MGI SNP Detail		 Chr4:130547783 Sdc3 within coordinates of
Tssr39272 1668 bp downstream
 SNP C/T T C
rs27590022
MGI SNP Detail		 Chr4:130547916 Sdc3 within coordinates of
Tssr39272 1801 bp downstream
 SNP A/G A A A A A A G A A G A G A A G G A
rs27590021
MGI SNP Detail		 Chr4:130547938 Sdc3 within coordinates of
Tssr39272 1823 bp downstream
 SNP C/T T T T T T T T T C C T C T
rs27590020
MGI SNP Detail		 Chr4:130548075 Sdc3 within coordinates of
Tssr39272 1960 bp downstream
 SNP A/G G G G G G G G G A A G G A G
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Showing SNP(s) 1 - 37 of 37
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory