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Mouse SNP Summary
Symbol
Name
ID 		Tssr39288
transcription start site region 39288
MGI:5967055

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Showing SNP(s) 1 - 29 of 29

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs27590011
MGI SNP Detail		 Chr4:130548888 Sdc3 within coordinates of
Tssr39288 1934 bp upstream
 SNP C/T C C C C C C C C C T T C C T C
rs222205323
MGI SNP Detail		 Chr4:130548906 Sdc3 within coordinates of
Tssr39288 1916 bp upstream
 SNP G/T G T
rs240861257
MGI SNP Detail		 Chr4:130549203 Sdc3 within coordinates of
Tssr39288 1619 bp upstream
 SNP A/G G A
rs27590010
MGI SNP Detail		 Chr4:130549282 Sdc3 within coordinates of
Tssr39288 1540 bp upstream
 SNP G/T G G G G G G G G T G G G T G
rs27590009
MGI SNP Detail		 Chr4:130549349 Sdc3 within coordinates of
Tssr39288 1473 bp upstream
 SNP C/T C C C C C C T C C C C C C C C
rs262820848
MGI SNP Detail		 Chr4:130549447 Sdc3 within coordinates of
Tssr39288 1375 bp upstream
 SNP G/T T G
rs230248254
MGI SNP Detail		 Chr4:130549920 Sdc3 within coordinates of
Tssr39288 902 bp upstream
 SNP C/T C T
rs242391312
MGI SNP Detail		 Chr4:130549988 Sdc3 within coordinates of
Tssr39288 834 bp upstream
 SNP C/T C T
rs264696534
MGI SNP Detail		 Chr4:130550283 Sdc3 within coordinates of
Tssr39288 539 bp upstream
 SNP C/T C T
rs229156146
MGI SNP Detail		 Chr4:130550312 Sdc3 within coordinates of
Tssr39288 510 bp upstream
 SNP A/G G A
rs246567351
MGI SNP Detail		 Chr4:130550657 Sdc3 within coordinates of
Tssr39288 165 bp upstream
 SNP A/C C A
rs215779249
MGI SNP Detail		 Chr4:130550779 Sdc3 within coordinates of
Tssr39288 43 bp upstream
 SNP G/T T G
rs27590008
MGI SNP Detail		 Chr4:130550862 Sdc3 within coordinates of
Tssr39288 27 bp downstream
 SNP C/T C C C C C C T C C T T C C T C
rs226837515
MGI SNP Detail		 Chr4:130551050 Sdc3 within coordinates of
Tssr39288 215 bp downstream
 SNP A/G G A
rs256201621
MGI SNP Detail		 Chr4:130551233 Sdc3 within coordinates of
Tssr39288 398 bp downstream
 SNP C/T C T
rs27590007
MGI SNP Detail		 Chr4:130551268 Sdc3 within coordinates of
Tssr39288 433 bp downstream
 SNP C/T C C C C C C C C C T T C C T C
rs213364363
MGI SNP Detail		 Chr4:130551697 Sdc3 within coordinates of
Tssr39288 862 bp downstream
 SNP C/T C T
rs27590006
MGI SNP Detail		 Chr4:130551740 Gm26716 within coordinates of
Sdc3 within coordinates of
Tssr39288 905 bp downstream
 SNP C/T C C C C C C C C C T T C C T C
rs27590005
MGI SNP Detail		 Chr4:130551742 Gm26716 within coordinates of
Sdc3 within coordinates of
Tssr39288 907 bp downstream
 SNP A/G G G G G G G G G G G G G G G A
rs236836090
MGI SNP Detail		 Chr4:130552008 Gm26716 within coordinates of
Sdc3 within coordinates of
Tssr39288 1173 bp downstream
 SNP A/G G A
rs49059560
MGI SNP Detail		 Chr4:130552044 Gm26716 within coordinates of
Sdc3 within coordinates of
Tssr39288 1209 bp downstream
 SNP C/T C C T T
rs27590004
MGI SNP Detail		 Chr4:130552249 Gm26716 within coordinates of
Sdc3 within coordinates of
Tssr39288 1414 bp downstream
 SNP A/G A A A A A A A A A A G A A A A
rs217190276
MGI SNP Detail		 Chr4:130552250 Gm26716 within coordinates of
Sdc3 within coordinates of
Tssr39288 1415 bp downstream
 SNP C/G C G
rs27590003
MGI SNP Detail		 Chr4:130552381 Gm26716 within coordinates of
Sdc3 within coordinates of
Tssr39288 1546 bp downstream
 SNP A/G G G G G G G G G G A A A G G A G
rs27590002
MGI SNP Detail		 Chr4:130552450 Gm26716 within coordinates of
Sdc3 within coordinates of
Tssr39288 1615 bp downstream
 SNP A/G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3<tf>/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
LG/J
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
SM/J
WSB/EiJ
rs46060128
MGI SNP Detail		 Chr4:130552482 Gm26716 within coordinates of
Sdc3 within coordinates of
Tssr39288 1647 bp downstream
 SNP C/T C C T
rs27590001
MGI SNP Detail		 Chr4:130552672 Gm26716 within coordinates of
Sdc3 within coordinates of
Tssr39288 1837 bp downstream
 SNP A/G A A A A A A G A A G A G A A G G A
rs254732887
MGI SNP Detail		 Chr4:130552693 Gm26716 within coordinates of
Sdc3 within coordinates of
Tssr39288 1858 bp downstream
 SNP A/G A G
rs27590000
MGI SNP Detail		 Chr4:130552704 Gm26716 within coordinates of
Sdc3 within coordinates of
Tssr39288 1869 bp downstream
 SNP A/G A A A A A A G A A A A A A A G A
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Showing SNP(s) 1 - 29 of 29
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory