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Mouse SNP Summary
Symbol
Name
ID 		Tssr39346
transcription start site region 39346
MGI:5967113

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Showing SNP(s) 1 - 35 of 35

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
KK/HlJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs581934782
MGI SNP Detail		 Chr4:130660271 Laptm5 within coordinates of
Tssr39346 1986 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs262351624
MGI SNP Detail		 Chr4:130660662 Laptm5 within coordinates of
Tssr39346 1595 bp upstream
 SNP C/T C T
rs27557457
MGI SNP Detail		 Chr4:130660867 Laptm5 within coordinates of
Tssr39346 1390 bp upstream
 SNP C/T T T T T T T T T T C C T T C T
rs27557456
MGI SNP Detail		 Chr4:130661036 Laptm5 within coordinates of
Tssr39346 1221 bp upstream
 SNP G/T G G G G G G T G G G G G G G G
rs27557455
MGI SNP Detail		 Chr4:130661083 Laptm5 within coordinates of
Tssr39346 1174 bp upstream
 SNP A/G G G G G G G G G G A A G G A G
rs27557454
MGI SNP Detail		 Chr4:130661100 Laptm5 within coordinates of
Tssr39346 1157 bp upstream
 SNP C/T T T T T T T T T T T T T T C T
rs27557453
MGI SNP Detail		 Chr4:130661899 Laptm5 within coordinates of
Tssr39337 within coordinates of
Tssr39346 358 bp upstream
 SNP A/G A A A A A A A A A G G A A A A
rs27557452
MGI SNP Detail		 Chr4:130661903 Laptm5 within coordinates of
Tssr39337 within coordinates of
Tssr39346 354 bp upstream
 SNP C/T C C C C C C C C C C C C C T C
rs27557451
MGI SNP Detail		 Chr4:130662045 Laptm5 within coordinates of
Tssr39341 within coordinates of
Tssr39346 212 bp upstream
 SNP C/T C C C C C C C C C C C C C T C
rs27557450
MGI SNP Detail		 Chr4:130662046 Laptm5 within coordinates of
Tssr39341 within coordinates of
Tssr39346 211 bp upstream
 SNP A/G G G G G G G A G G A A G G G G
rs27557449
MGI SNP Detail		 Chr4:130662078 Laptm5 within coordinates of
Tssr39346 179 bp upstream
 SNP A/G G G G G G G G G A A G G G G
rs3024208
MGI SNP Detail		 Chr4:130662149 Laptm5 within coordinates of
Tssr39343 within coordinates of
Tssr39346 108 bp upstream
 SNP C/T T T C C C T T C T C C C C C T C C T T C C T T C C T T C T C C C C C C T T T T C T T T T T C T T T
rs27557448
MGI SNP Detail		 Chr4:130662201 Laptm5 within coordinates of
Tssr39346 56 bp upstream
 SNP C/T T T T T T T T T T C C T T T T
rs3024209
MGI SNP Detail		 Chr4:130662242 Laptm5 within coordinates of
Tssr39345 within coordinates of
Tssr39346 15 bp upstream
 SNP A/G G G G G G G A G G G G G G G
rs27557447
MGI SNP Detail		 Chr4:130662296 Laptm5 within coordinates of
Tssr39346 26 bp downstream
 SNP A/G A A A A A A A A A G A A G A
rs27557446
MGI SNP Detail		 Chr4:130662323 Laptm5 within coordinates of
Tssr39346 53 bp downstream
 SNP A/G G G G G G G G G G G G A G
rs27557445
MGI SNP Detail		 Chr4:130662349 Laptm5 within coordinates of
Tssr39346 79 bp downstream
 SNP C/T T T T T T T T T T T T T T C T
rs236843770
MGI SNP Detail		 Chr4:130662464 Laptm5 within coordinates of
Tssr39346 194 bp downstream
 SNP C/T T C
rs32707221
MGI SNP Detail		 Chr4:130662704 Laptm5 within coordinates of
Tssr39346 434 bp downstream
 SNP C/T C C T T
rs32927370
MGI SNP Detail		 Chr4:130662748 Laptm5 within coordinates of
Tssr39346 478 bp downstream
 SNP C/T T T C
rs32516585
MGI SNP Detail		 Chr4:130662764 Laptm5 within coordinates of
Tssr39346 494 bp downstream
 SNP C/T C C T T
rs32926973
MGI SNP Detail		 Chr4:130662776 Laptm5 within coordinates of
Tssr39346 506 bp downstream
 SNP C/T C C T
rs27557444
MGI SNP Detail		 Chr4:130662931 Laptm5 within coordinates of
Tssr39346 661 bp downstream
 SNP A/G A A G G G G G A A A G G A A
rs32981145
MGI SNP Detail		 Chr4:130662967 Laptm5 within coordinates of
Tssr39346 697 bp downstream
 SNP A/C A A C C A A
rs27557443
MGI SNP Detail		 Chr4:130663057 Laptm5 within coordinates of
Tssr39346 787 bp downstream
 SNP A/C C C C C C C C C C C C C C A C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/6J
C57BL/6NJ
C57BLKS/J
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
DDK/Pas
FVB/NJ
I/LnJ
JF1/Ms
KK/HlJ
LG/J
LP/J
MAI/Pas
MA/MyJ
MOLF/EiJ
MSM/Ms
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PERA/EiJ
PL/J
PWD/Ph
PWD/PhJ
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SEG/Pas
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27557442
MGI SNP Detail		 Chr4:130663088 Laptm5 within coordinates of
Tssr39346 818 bp downstream
 SNP C/T T T T T T T C T T T T T T T T
rs27557441
MGI SNP Detail		 Chr4:130663178 Laptm5 within coordinates of
Tssr39346 908 bp downstream
 SNP A/G G G G G G G G G G A G G A G
rs27557440
MGI SNP Detail		 Chr4:130663254 Laptm5 within coordinates of
Tssr39346 984 bp downstream
 SNP C/T C C T T T C T C T C T C T T T T C C
rs27557439
MGI SNP Detail		 Chr4:130663304 Laptm5 within coordinates of
Tssr39346 1034 bp downstream
 SNP C/T T T T T T T T T T C C T T T T
rs31931338
MGI SNP Detail		 Chr4:130663308 Laptm5 within coordinates of
Tssr39346 1038 bp downstream
 SNP A/G A G G A A
rs27557438
MGI SNP Detail		 Chr4:130663535 Tssr39346 1265 bp downstream
 SNP G/T T T T T T T T T T T T T T G T
rs27557437
MGI SNP Detail		 Chr4:130663759 Tssr39346 1489 bp downstream
 SNP C/T T T T T T T T T T T T T T C T
rs27557436
MGI SNP Detail		 Chr4:130663827 Tssr39346 1557 bp downstream
 SNP A/G A A A A A A A A A G G A A A A
rs27557435
MGI SNP Detail		 Chr4:130663989 Tssr39346 1719 bp downstream
 SNP G/T T T T T T T T T T G G T T T T
rs27557434
MGI SNP Detail		 Chr4:130664025 Tssr39346 1755 bp downstream
 SNP A/G A A A A A A A A A G G A A A A
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Showing SNP(s) 1 - 35 of 35
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory