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Mouse SNP Summary
Symbol
Name
ID 		Tssr40222
transcription start site region 40222
MGI:5967989

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Showing SNP(s) 1 - 39 of 39

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57L/J
C58/J
CBA/J
CZECHII/EiJ
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MOLF/EiJ
MSM/Ms
NZO/HlLtJ
NZW/LacJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SM/J
SPRET/EiJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs47188363
MGI SNP Detail		 Chr4:145289185 Tssr40222 1999 bp upstream
 SNP C C
rs47205775
MGI SNP Detail		 Chr4:145289430 Tssr40222 1754 bp upstream
 SNP A A
rs45726088
MGI SNP Detail		 Chr4:145289491 Tssr40222 1693 bp upstream
 SNP G G
rs108001982
MGI SNP Detail		 Chr4:145289677 Tssr40222 1507 bp upstream
 SNP C C C C
rs585110783
MGI SNP Detail		 Chr4:145289922 Tssr40222 1262 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579688262
MGI SNP Detail		 Chr4:145290114 Tssr40222 1070 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T
rs108061306
MGI SNP Detail		 Chr4:145290170 Tssr40222 1014 bp upstream
 SNP C C C
rs48315207
MGI SNP Detail		 Chr4:145290194 Tssr40222 990 bp upstream
 SNP T T
rs46263770
MGI SNP Detail		 Chr4:145290246 Tssr40222 938 bp upstream
 SNP G/T T G
rs582872644
MGI SNP Detail		 Chr4:145290276 Tssr40222 908 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs52153608
MGI SNP Detail		 Chr4:145290281 Tssr40222 903 bp upstream
 SNP C/T C T
rs49525061
MGI SNP Detail		 Chr4:145290350 Tssr40222 834 bp upstream
 SNP C C C
rs48555016
MGI SNP Detail		 Chr4:145290464 Tssr40222 720 bp upstream
 SNP G G
rs51140663
MGI SNP Detail		 Chr4:145290616 Tssr40222 568 bp upstream
 SNP A A A
rs51670841
MGI SNP Detail		 Chr4:145290908 Tssr40222 276 bp upstream
 SNP G G G
rs586247835
MGI SNP Detail		 Chr4:145290996 Tssr40222 188 bp upstream
 SNP A A A A A A A A A A A A A
rs51500869
MGI SNP Detail		 Chr4:145291198 Gm70447 within coordinates of
Rr97125 within coordinates of
Tssr40222 within coordinates of
 SNP G G G
rs47961470
MGI SNP Detail		 Chr4:145291208 Gm70447 within coordinates of
Rr97125 within coordinates of
Tssr40222 within coordinates of
 SNP G G G
rs49006557
MGI SNP Detail		 Chr4:145291240 Gm70447 within coordinates of
Rr97125 within coordinates of
Tssr40222 24 bp downstream
 SNP T T
rs580563154
MGI SNP Detail		 Chr4:145291347 Gm70447 within coordinates of
Tssr40222 131 bp downstream
 SNP G G G G G G G G G G
rs51493982
MGI SNP Detail		 Chr4:145291426 Gm70447 within coordinates of
Tssr40222 210 bp downstream
 SNP C/G C G
rs586150174
MGI SNP Detail		 Chr4:145291568 Gm70447 within coordinates of
Tssr40222 352 bp downstream
 SNP C/T T C
rs579739413
MGI SNP Detail		 Chr4:145291602 Gm70447 within coordinates of
Tssr40222 386 bp downstream
 SNP A/C C A
rs583469619
MGI SNP Detail		 Chr4:145291881 Gm70447 within coordinates of
Tssr40222 665 bp downstream
 SNP A A A A A A A A A A A A
rs586228729
MGI SNP Detail		 Chr4:145291890 Gm70447 within coordinates of
Tssr40222 674 bp downstream
 SNP C/T C T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57L/J
C58/J
CBA/J
CZECHII/EiJ
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MOLF/EiJ
MSM/Ms
NZO/HlLtJ
NZW/LacJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SM/J
SPRET/EiJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs580855546
MGI SNP Detail		 Chr4:145291968 Gm70447 within coordinates of
Tssr40222 752 bp downstream
 SNP T T T T T T T T T T
rs583164204
MGI SNP Detail		 Chr4:145292134 Gm70447 within coordinates of
Tssr40222 918 bp downstream
 SNP C/T C C C C C C T
rs581730853
MGI SNP Detail		 Chr4:145292205 Gm70447 within coordinates of
Tssr40222 989 bp downstream
 SNP G G G G G G G G G G G G G G
rs579112993
MGI SNP Detail		 Chr4:145292290 Gm70447 within coordinates of
Tssr40222 1074 bp downstream
 SNP A/G A G
rs580922563
MGI SNP Detail		 Chr4:145292296 Gm70447 within coordinates of
Tssr40222 1080 bp downstream
 SNP C/T T T T T T T T T T C
rs584684918
MGI SNP Detail		 Chr4:145292474 Gm70447 within coordinates of
Tssr40222 1258 bp downstream
 SNP T T T T T T T T T T T T
rs578712025
MGI SNP Detail		 Chr4:145292603 Gm70447 within coordinates of
Tssr40222 1387 bp downstream
 SNP G G G G G G G G G G G G G G
rs581888689
MGI SNP Detail		 Chr4:145292629 Gm70447 within coordinates of
Tssr40222 1413 bp downstream
 SNP G/T T G
rs585552412
MGI SNP Detail		 Chr4:145292681 Gm70447 within coordinates of
Tssr40222 1465 bp downstream
 SNP C C C C C C C C C C C C C
rs579178851
MGI SNP Detail		 Chr4:145292743 Gm70447 within coordinates of
Tssr40222 1527 bp downstream
 SNP A A A A A A A A A A A A A A A
rs582945607
MGI SNP Detail		 Chr4:145292881 Gm70447 within coordinates of
Tssr40222 1665 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G
rs585646445
MGI SNP Detail		 Chr4:145292918 Gm70447 within coordinates of
Tssr40222 1702 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T A T
rs580245799
MGI SNP Detail		 Chr4:145293088 Gm70447 within coordinates of
Tssr40222 1872 bp downstream
 SNP A/G A A A A A A A A G A A A A A G G G
rs253801674
MGI SNP Detail		 Chr4:145293207 Gm70447 within coordinates of
Tssr40222 1991 bp downstream
 SNP G G G
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Showing SNP(s) 1 - 39 of 39
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory