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Mouse SNP Summary
Symbol
Name
ID 		Tssr40270
transcription start site region 40270
MGI:5968037

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Showing SNP(s) 1 - 74 of 74

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs255019388
MGI SNP Detail		 Chr4:148416049 Tssr40270 1887 bp upstream
 SNP C C C
rs214376929
MGI SNP Detail		 Chr4:148416233 Tssr40270 1703 bp upstream
 SNP G G G
rs235911609
MGI SNP Detail		 Chr4:148416264 Tssr40270 1672 bp upstream
 SNP A/G A G
rs256647393
MGI SNP Detail		 Chr4:148416333 Tssr40270 1603 bp upstream
 SNP G G G
rs47061023
MGI SNP Detail		 Chr4:148416402 Tssr40270 1534 bp upstream
 SNP A A A A
rs48833175
MGI SNP Detail		 Chr4:148416486 Tssr40270 1450 bp upstream
 SNP C C C C
rs46570121
MGI SNP Detail		 Chr4:148416491 Tssr40270 1445 bp upstream
 SNP G/T T G T
rs45673068
MGI SNP Detail		 Chr4:148416504 Tssr40270 1432 bp upstream
 SNP C/T C C T
rs48393273
MGI SNP Detail		 Chr4:148416505 Tssr40270 1431 bp upstream
 SNP A A A A
rs46055783
MGI SNP Detail		 Chr4:148416611 Tssr40270 1325 bp upstream
 SNP C C C C
rs27599315
MGI SNP Detail		 Chr4:148416633 Tssr40270 1303 bp upstream
 SNP A/G G G G G G G G G G G A G G G G
rs27599314
MGI SNP Detail		 Chr4:148416663 Tssr40270 1273 bp upstream
 SNP A/G A A A A A A A A A G A A A A A A A A
rs27599313
MGI SNP Detail		 Chr4:148416719 Tssr40270 1217 bp upstream
 SNP A/G G G G G G G G G G A G G G G G G G G
rs31810999
MGI SNP Detail		 Chr4:148416805 Tssr40270 1131 bp upstream
 SNP C/T C C T C C
rs32819326
MGI SNP Detail		 Chr4:148416815 Tssr40270 1121 bp upstream
 SNP A/C C C A C C
rs32399664
MGI SNP Detail		 Chr4:148416895 Tssr40270 1041 bp upstream
 SNP A/G G A G G
rs32828326
MGI SNP Detail		 Chr4:148416966 Tssr40270 970 bp upstream
 SNP A/G A G A A
rs32408016
MGI SNP Detail		 Chr4:148416967 Tssr40270 969 bp upstream
 SNP A/G A G A A
rs31754973
MGI SNP Detail		 Chr4:148416982 Tssr40270 954 bp upstream
 SNP A/G A G A A
rs50468923
MGI SNP Detail		 Chr4:148417120 Tssr40270 816 bp upstream
 SNP G G G G G G
rs216974789
MGI SNP Detail		 Chr4:148417393 Tssr40270 543 bp upstream
 SNP C/G C G
rs581274388
MGI SNP Detail		 Chr4:148417487 Tssr40270 449 bp upstream
 SNP C/G G G G G G G G G G G G C G G
rs584448286
MGI SNP Detail		 Chr4:148417509 Tssr40270 427 bp upstream
 SNP C/G G C C C C C C C C G G G
rs586866929
MGI SNP Detail		 Chr4:148417524 Tssr40270 412 bp upstream
 SNP A/G G A G A A A A A G A A A A A A G A G G A G G
rs581022368
MGI SNP Detail		 Chr4:148417533 Tssr40270 403 bp upstream
 SNP C/G G G G G C G G G G G C G G G G G G G G C G G C G G G G G G C G G G G G G G G C G G G G G G G G G G G C G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs584404738
MGI SNP Detail		 Chr4:148417539 Tssr40270 397 bp upstream
 SNP C/G C C C C G C C C C G G G G C G C C G C G G G C C C C G C C C C C C C C C C C G C C C
rs27599312
MGI SNP Detail		 Chr4:148417551 Tssr40270 385 bp upstream
 SNP C/G C C C C G C G C C C C C C
rs27599311
MGI SNP Detail		 Chr4:148417635 Tssr40270 301 bp upstream
 SNP A/T A A A A A A T A T A A A A A A A A
rs27599310
MGI SNP Detail		 Chr4:148417724 Tssr40270 212 bp upstream
 SNP A/G G G G G G G A G A G G G G G G
rs27599309
MGI SNP Detail		 Chr4:148417771 Tssr40270 165 bp upstream
 SNP C/T C C C T T C C C C
rs50777930
MGI SNP Detail		 Chr4:148417788 Tssr40270 148 bp upstream
 SNP C/T C T T
rs238477275
MGI SNP Detail		 Chr4:148417797 Tssr40270 139 bp upstream
 SNP G G G
rs45854806
MGI SNP Detail		 Chr4:148417827 Tssr40270 109 bp upstream
 SNP C C C C C C
rs46983392
MGI SNP Detail		 Chr4:148417905 Tssr40270 31 bp upstream
 SNP A A A A A A
rs27599308
MGI SNP Detail		 Chr4:148417908 Gm68587 within coordinates of
Tssr40270 28 bp upstream
 SNP A/G G G G G G G G A G G G G G G G
rs27599307
MGI SNP Detail		 Chr4:148418005 Gm68587 within coordinates of
Tssr40270 63 bp downstream
 SNP A/G G G G G G G G G G A G G G G G G G G
rs222820636
MGI SNP Detail		 Chr4:148418010 Gm68587 within coordinates of
Tssr40270 68 bp downstream
 SNP A/G A G
rs27599306
MGI SNP Detail		 Chr4:148418037 Gm68587 within coordinates of
Tssr40270 95 bp downstream
 SNP C/T T T T T T T C T T T C T T T T
rs47261771
MGI SNP Detail		 Chr4:148418104 Gm68587 within coordinates of
Tssr40270 162 bp downstream
 SNP A/G A G G
rs45736527
MGI SNP Detail		 Chr4:148418193 Gm68587 within coordinates of
Tssr40270 251 bp downstream
 SNP A A A A A A
rs47263501
MGI SNP Detail		 Chr4:148418209 Gm68587 within coordinates of
Tssr40270 267 bp downstream
 SNP T T T T T T
rs27599305
MGI SNP Detail		 Chr4:148418264 Gm68587 within coordinates of
Tssr40270 322 bp downstream
 SNP C/T C C C C C C T C C C C C C C
rs27599304
MGI SNP Detail		 Chr4:148418265 Gm68587 within coordinates of
Tssr40270 323 bp downstream
 SNP C/T C C T C C T C C C T C C C C T
rs27599303
MGI SNP Detail		 Chr4:148418284 Gm68587 within coordinates of
Tssr40270 342 bp downstream
 SNP A/C A A A A A A C A C A A A A A A A
rs27599302
MGI SNP Detail		 Chr4:148418343 Gm68587 within coordinates of
Tssr40270 401 bp downstream
 SNP A/G A A A A A A A A A A G A A A A
rs27599301
MGI SNP Detail		 Chr4:148418357 Gm68587 within coordinates of
Tssr40270 415 bp downstream
 SNP C/T C C C C C C C C C C T C C C C
rs27599300
MGI SNP Detail		 Chr4:148418441 Gm68587 within coordinates of
Tssr40270 499 bp downstream
 SNP C/T T T T T T T T T T C T T T T
rs52036454
MGI SNP Detail		 Chr4:148418471 Gm68587 within coordinates of
Tssr40270 529 bp downstream
 SNP C C C C C C
rs27599299
MGI SNP Detail		 Chr4:148418543 Gm68587 within coordinates of
Tssr40270 601 bp downstream
 SNP A/G G G G G G G G G G A G G G G G G G G
rs27599298
MGI SNP Detail		 Chr4:148418585 Gm68587 within coordinates of
Tssr40270 643 bp downstream
 SNP C/G C C C C C C C C C C G C C C C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27599297
MGI SNP Detail		 Chr4:148418600 Gm68587 within coordinates of
Tssr40270 658 bp downstream
 SNP C/G G G G G G G C G G G G G G G G
rs27599296
MGI SNP Detail		 Chr4:148418714 Gm68587 within coordinates of
Tssr40270 772 bp downstream
 SNP G/T G G G G G G G T G G T G G G G G G G G
rs27599295
MGI SNP Detail		 Chr4:148418731 Gm68587 within coordinates of
Tssr40270 789 bp downstream
 SNP A/G G G G G G G A G G G A G G G G
rs27599294
MGI SNP Detail		 Chr4:148418759 Gm68587 within coordinates of
Tssr40270 817 bp downstream
 SNP A/G G G G G G G G A G G A G G A G G G G G
rs27599293
MGI SNP Detail		 Chr4:148418775 Gm68587 within coordinates of
Tssr40270 833 bp downstream
 SNP C/T C C T C C T C C C T T C C C C T
rs31878533
MGI SNP Detail		 Chr4:148418831 Gm68587 within coordinates of
Tssr40270 889 bp downstream
 SNP A/G G A G A G A
rs27599292
MGI SNP Detail		 Chr4:148418890 Gm68587 within coordinates of
Tssr40270 948 bp downstream
 SNP A/G A A A A A A G A A A A A A A
rs27599291
MGI SNP Detail		 Chr4:148419025 Gm68587 within coordinates of
Tssr40270 1083 bp downstream
 SNP C/T C C C C C C T C C C C C C C C
rs27599290
MGI SNP Detail		 Chr4:148419148 Gm68587 within coordinates of
Tssr40270 1206 bp downstream
 SNP C/T C C C C C C C C T C C C C C C C C
rs27599289
MGI SNP Detail		 Chr4:148419171 Gm68587 within coordinates of
Tssr40270 1229 bp downstream
 SNP A/G A A A A A A G A A A G A A A A
rs27599288
MGI SNP Detail		 Chr4:148419239 Gm68587 within coordinates of
Tssr40270 1297 bp downstream
 SNP C/T C C T C C T C C C C T C C C C C T
rs27599287
MGI SNP Detail		 Chr4:148419415 Gm68587 within coordinates of
Tssr40270 1473 bp downstream
 SNP A/C C C C C C C A C C C A C C C C
rs27599286
MGI SNP Detail		 Chr4:148419450 Gm68587 within coordinates of
Tssr40270 1508 bp downstream
 SNP C/T T C C T C C C C C C C C C
rs27599285
MGI SNP Detail		 Chr4:148419454 Gm68587 within coordinates of
Tssr40270 1512 bp downstream
 SNP C/T C T C T C C T T C C T T T T C
rs27599284
MGI SNP Detail		 Chr4:148419495 Gm68587 within coordinates of
Tssr40270 1553 bp downstream
 SNP C/T T T T T T T C T T T C T T T T
rs27599283
MGI SNP Detail		 Chr4:148419533 Gm68587 within coordinates of
Tssr40270 1591 bp downstream
 SNP C/T T T T T T T T C T C T T C T T T T T
rs27599282
MGI SNP Detail		 Chr4:148419678 Gm68587 within coordinates of
Tssr40270 1736 bp downstream
 SNP C/T C C C C C C C T C T C C T C C C C C
rs27599281
MGI SNP Detail		 Chr4:148419714 Gm68587 within coordinates of
Tssr40270 1772 bp downstream
 SNP A/T T T T T T A T A T T A T T T T
rs47479349
MGI SNP Detail		 Chr4:148419806 Gm68587 within coordinates of
Tssr40270 1864 bp downstream
 SNP A A A A A A
rs250242676
MGI SNP Detail		 Chr4:148419850 Gm68587 within coordinates of
Tssr40270 1908 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs221861220
MGI SNP Detail		 Chr4:148419851 Gm68587 within coordinates of
Tssr40270 1909 bp downstream
 SNP G/T T T T G T T T T T G G G G T T T G T T G T T G G G T T T T G T T T T T T T T T T T T T T G T T T
rs246716121
MGI SNP Detail		 Chr4:148419872 Gm68587 within coordinates of
Tssr40270 1930 bp downstream
 SNP A A A A A A A A A A A A A
rs257144570
MGI SNP Detail		 Chr4:148419923 Gm68587 within coordinates of
Tssr40270 1981 bp downstream
 SNP C/G C C C C C C C C G
rs232947370
MGI SNP Detail		 Chr4:148419939 Gm68587 within coordinates of
Tssr40270 1997 bp downstream
 SNP G G G
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Showing SNP(s) 1 - 74 of 74
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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory