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Mouse SNP Summary
Symbol
Name
ID 		Tssr40790
transcription start site region 40790
MGI:5968557

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Showing SNP(s) 1 - 100 of 157

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs242063402
MGI SNP Detail		 Chr4:156192449 Gm69135 within coordinates of
Tssr40790 1979 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A
rs265032495
MGI SNP Detail		 Chr4:156192565 Gm69135 within coordinates of
Tssr40790 1863 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs230917696
MGI SNP Detail		 Chr4:156192646 Gm69135 within coordinates of
Tssr40790 1782 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A
rs213787501
MGI SNP Detail		 Chr4:156192660 Gm69135 within coordinates of
Tssr40790 1768 bp upstream
 SNP C/T T C
rs227998295
MGI SNP Detail		 Chr4:156192669 Gm69135 within coordinates of
Tssr40790 1759 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs51686933
MGI SNP Detail		 Chr4:156192677 Gm69135 within coordinates of
Tssr40790 1751 bp upstream
 SNP T T
rs253715276
MGI SNP Detail		 Chr4:156192682 Gm69135 within coordinates of
Tssr40790 1746 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs239168737
MGI SNP Detail		 Chr4:156192696 Gm69135 within coordinates of
Tssr40790 1732 bp upstream
 SNP C/G C G
rs251007955
MGI SNP Detail		 Chr4:156192697 Gm69135 within coordinates of
Tssr40790 1731 bp upstream
 SNP A/T A A A A A A T T A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs48961976
MGI SNP Detail		 Chr4:156192726 Gm69135 within coordinates of
Tssr40790 1702 bp upstream
 SNP C/G C C G
rs50484891
MGI SNP Detail		 Chr4:156192732 Gm69135 within coordinates of
Tssr40790 1696 bp upstream
 SNP A/C C C A
rs33225790
MGI SNP Detail		 Chr4:156192765 Gm69135 within coordinates of
Tssr40790 1663 bp upstream
 SNP A/G A A A A A A G A A G A A A A
rs216974920
MGI SNP Detail		 Chr4:156192777 Gm69135 within coordinates of
Tssr40790 1651 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs579957637
MGI SNP Detail		 Chr4:156192787 Gm69135 within coordinates of
Tssr40790 1641 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs236484679
MGI SNP Detail		 Chr4:156192798 Gm69135 within coordinates of
Tssr40790 1630 bp upstream
 SNP C/T C T C T T T T T T T T T T C C T C T T T T T T T T T C T C C T C T C T T C T
rs33225793
MGI SNP Detail		 Chr4:156192817 Gm69135 within coordinates of
Tssr40790 1611 bp upstream
 SNP A/G G G G G A G A G A A G G
rs249652317
MGI SNP Detail		 Chr4:156192821 Gm69135 within coordinates of
Tssr40790 1607 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs219045170
MGI SNP Detail		 Chr4:156192873 Gm69135 within coordinates of
Tssr40790 1555 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs33226576
MGI SNP Detail		 Chr4:156192895 Gm69135 within coordinates of
Tssr40790 1533 bp upstream
 SNP C/T C C C C C C C C C T C C C T C C
rs33226579
MGI SNP Detail		 Chr4:156192948 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 1480 bp upstream
 SNP C/G G G G G G G G G G C G G C G
rs222999402
MGI SNP Detail		 Chr4:156193002 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 1426 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C A C C C C
rs244989234
MGI SNP Detail		 Chr4:156193021 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 1407 bp upstream
 SNP C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C
rs33226582
MGI SNP Detail		 Chr4:156193101 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 1327 bp upstream
 SNP C/G G G G G G G C G G G G G G G
rs253592064
MGI SNP Detail		 Chr4:156193185 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 1243 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs33227305
MGI SNP Detail		 Chr4:156193191 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 1237 bp upstream
 SNP A/T A A A A A A A A A T A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs228520599
MGI SNP Detail		 Chr4:156193204 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 1224 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs254951167
MGI SNP Detail		 Chr4:156193218 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 1210 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs255577816
MGI SNP Detail		 Chr4:156193225 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 1203 bp upstream
 SNP C/T T C
rs33227308
MGI SNP Detail		 Chr4:156193253 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 1175 bp upstream
 SNP A/G G G G G G G A G G A G G G G
rs33227311
MGI SNP Detail		 Chr4:156193277 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 1151 bp upstream
 SNP A/C A A A A A A A A A C A A A C A A
rs217028713
MGI SNP Detail		 Chr4:156193311 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 1117 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs236753656
MGI SNP Detail		 Chr4:156193314 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 1114 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs32116451
MGI SNP Detail		 Chr4:156193345 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 1083 bp upstream
 SNP A/T A A A A A T A T A A T A A T A T A
rs583798685
MGI SNP Detail		 Chr4:156193436 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 992 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T
rs587430549
MGI SNP Detail		 Chr4:156193440 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 988 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs579869536
MGI SNP Detail		 Chr4:156193445 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 983 bp upstream
 SNP T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T
rs213342453
MGI SNP Detail		 Chr4:156193497 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 931 bp upstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs236244129
MGI SNP Detail		 Chr4:156193503 Gm69135 within coordinates of
Rr606676 within coordinates of
Rr606677 within coordinates of
Tssr40790 925 bp upstream
 SNP G/T G G G G G G T T G G G G G G G G G G T G T G G T G G G T G G G G T G G G T G T T G G
rs262547688
MGI SNP Detail		 Chr4:156193515 Gm69135 within coordinates of
Rr606676 within coordinates of
Rr606677 within coordinates of
Tssr40790 913 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G G G G G G G G
rs224349470
MGI SNP Detail		 Chr4:156193524 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 904 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G A G G G G G G G G G G G G G G G G G G G G G
rs239835978
MGI SNP Detail		 Chr4:156193526 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 902 bp upstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A T A A A A A A A A A A A A A A A A A A A A A
rs251830383
MGI SNP Detail		 Chr4:156193566 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 862 bp upstream
 SNP A/T A A T T T T T A T T T T T T T T T A A A T T T T T T T T T A T A T T A A A T T A T T T A
rs586212367
MGI SNP Detail		 Chr4:156193618 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 810 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs221951616
MGI SNP Detail		 Chr4:156193648 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 780 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs32715937
MGI SNP Detail		 Chr4:156193673 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 755 bp upstream
 SNP A/G A A A A A G A G A A G A A A G A A A
rs223050620
MGI SNP Detail		 Chr4:156193688 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 740 bp upstream
 SNP C/T T C
rs33228168
MGI SNP Detail		 Chr4:156193701 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 727 bp upstream
 SNP A/T A A A A A A A A A T A A A T A A
rs242694367
MGI SNP Detail		 Chr4:156193732 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 696 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C T T C C T C C C C T C C T T T T C T C C C C T C C C C T C C T C C C C
rs261851210
MGI SNP Detail		 Chr4:156193735 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 693 bp upstream
 SNP C/G C G
rs231419752
MGI SNP Detail		 Chr4:156193744 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 684 bp upstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs33228171
MGI SNP Detail		 Chr4:156193788 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 640 bp upstream
 SNP A/G A A A A A A G A A G A A G A
rs260851181
MGI SNP Detail		 Chr4:156193790 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 638 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A G A A A G A A A A G A A G G G A A G A A A A G A A A A G A A A A A A A
rs229594165
MGI SNP Detail		 Chr4:156193791 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 637 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs243885431
MGI SNP Detail		 Chr4:156193797 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 631 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs213158059
MGI SNP Detail		 Chr4:156193813 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 615 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs226000960
MGI SNP Detail		 Chr4:156193835 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 593 bp upstream
 SNP A/C A C
rs230325167
MGI SNP Detail		 Chr4:156193854 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 574 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G G G G G G G G G G G T G G G G
rs580762013
MGI SNP Detail		 Chr4:156193867 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 561 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G A A G G A G G G G A G G A A A G G A G G G G A G G G G A G G G G G G G
rs251554377
MGI SNP Detail		 Chr4:156193875 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 553 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C T T C C T C C C C T C C T T T C C T C C C C T C C C C T C C T C C C C
rs45830781
MGI SNP Detail		 Chr4:156193992 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 436 bp upstream
 SNP G G
rs50086347
MGI SNP Detail		 Chr4:156193994 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 434 bp upstream
 SNP G G G
rs52153817
MGI SNP Detail		 Chr4:156194012 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 416 bp upstream
 SNP C C C
rs235022232
MGI SNP Detail		 Chr4:156194024 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 404 bp upstream
 SNP C/T C C C C C T T C C C C C C C C C C C T T C C C T C C C C T C C C C C C T C C C C T C C T T C
rs387312358
MGI SNP Detail		 Chr4:156194051 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 377 bp upstream
 SNP C/T T T T T T T C C T T T T T T T T T T C T C C C T T C T C T C C C C C C T T T T C C T T T C C T C C C T
rs579065165
MGI SNP Detail		 Chr4:156194060 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 368 bp upstream
 SNP C/T T T T T T T C C T T T T T T T T T T C T C C C T T C T C T C C C C C C T T T T C C T T T C C T C C C T
rs221433251
MGI SNP Detail		 Chr4:156194074 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 354 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs245606942
MGI SNP Detail		 Chr4:156194084 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 344 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C T T C C T C C C C T C C T T T T C T C C C C T C C C C T C C C C C C C
rs257529538
MGI SNP Detail		 Chr4:156194085 Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 343 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G
rs33229114
MGI SNP Detail		 Chr4:156194110 Cpgi15500 within coordinates of
Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 318 bp upstream
 SNP A/C A C A A C A A C A C A C C A C A
rs241448919
MGI SNP Detail		 Chr4:156194141 Cpgi15500 within coordinates of
Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 287 bp upstream
 SNP G/T T G
rs260413817
MGI SNP Detail		 Chr4:156194145 Cpgi15500 within coordinates of
Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 283 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs33229117
MGI SNP Detail		 Chr4:156194147 Cpgi15500 within coordinates of
Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 281 bp upstream
 SNP A/G A A A A A A G A A G G A G A A
rs33229120
MGI SNP Detail		 Chr4:156194155 Cpgi15500 within coordinates of
Gm69135 within coordinates of
Rr606676 within coordinates of
Tssr40790 273 bp upstream
 SNP A/T T A T T A T T T T T T A T T T
rs264963092
MGI SNP Detail		 Chr4:156194200 Cpgi15500 within coordinates of
Rr398931 within coordinates of
Rr606679 within coordinates of
Tssr40790 228 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T
rs227562567
MGI SNP Detail		 Chr4:156194210 Cpgi15500 within coordinates of
Rr398931 within coordinates of
Rr606679 within coordinates of
Tssr40790 218 bp upstream
 SNP C/T T C
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs50496533
MGI SNP Detail		 Chr4:156194217 Cpgi15500 within coordinates of
Rr398931 within coordinates of
Rr606679 within coordinates of
Tssr40790 211 bp upstream
 SNP A/G A G G G A
rs50562986
MGI SNP Detail		 Chr4:156194220 Cpgi15500 within coordinates of
Rr398931 within coordinates of
Rr606679 within coordinates of
Tssr40790 208 bp upstream
 SNP C/T T C C C T
rs584596439
MGI SNP Detail		 Chr4:156194256 Cpgi15500 within coordinates of
Rr398931 within coordinates of
Rr606679 within coordinates of
Tssr40790 172 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs246863620
MGI SNP Detail		 Chr4:156194268 Cpgi15500 within coordinates of
Rr398931 within coordinates of
Rr606679 within coordinates of
Tssr40790 160 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs217409821
MGI SNP Detail		 Chr4:156194286 Cpgi15500 within coordinates of
Rr398931 within coordinates of
Rr606679 within coordinates of
Tssr40790 142 bp upstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs235095720
MGI SNP Detail		 Chr4:156194293 Cpgi15500 within coordinates of
Rr398931 within coordinates of
Rr606679 within coordinates of
Tssr40790 135 bp upstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs255351580
MGI SNP Detail		 Chr4:156194298 Cpgi15500 within coordinates of
Rr398931 within coordinates of
Rr606679 within coordinates of
Tssr40790 130 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs213282010
MGI SNP Detail		 Chr4:156194317 Cpgi15500 within coordinates of
Rr398931 within coordinates of
Rr606679 within coordinates of
Tssr40790 111 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs236170081
MGI SNP Detail		 Chr4:156194325 Cpgi15500 within coordinates of
Rr398931 within coordinates of
Rr606679 within coordinates of
Tssr40790 103 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs262289955
MGI SNP Detail		 Chr4:156194329 Cpgi15500 within coordinates of
Rr398931 within coordinates of
Rr606679 within coordinates of
Tssr40790 99 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs220730157
MGI SNP Detail		 Chr4:156194405 Cpgi15500 within coordinates of
Rr398931 within coordinates of
Rr606679 within coordinates of
Tssr40790 23 bp upstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs33229123
MGI SNP Detail
Alliance Variant		 Chr4:156194525 9430015G10Rik Intron
9430015G10Rik mRNA-UTR
9430015G10Rik Noncoding-Transcript-Variant
Cpgi15500 within coordinates of
Rr606681 within coordinates of
Tssr40790 64 bp downstream
 SNP A/G G G G G G G A G G A G G A G
rs254160668
MGI SNP Detail
Alliance Variant		 Chr4:156194528 9430015G10Rik Intron
9430015G10Rik mRNA-UTR
9430015G10Rik Noncoding-Transcript-Variant
Cpgi15500 within coordinates of
Rr606681 within coordinates of
Tssr40790 67 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs223231898
MGI SNP Detail
Alliance Variant		 Chr4:156194536 9430015G10Rik Intron
9430015G10Rik mRNA-UTR
9430015G10Rik Noncoding-Transcript-Variant
Cpgi15500 within coordinates of
Rr606681 within coordinates of
Tssr40790 75 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs237571951
MGI SNP Detail
Alliance Variant		 Chr4:156194537 9430015G10Rik Intron
9430015G10Rik mRNA-UTR
9430015G10Rik Noncoding-Transcript-Variant
Cpgi15500 within coordinates of
Rr606681 within coordinates of
Tssr40790 76 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs262073645
MGI SNP Detail
Alliance Variant		 Chr4:156194572 9430015G10Rik Intron
9430015G10Rik mRNA-UTR
9430015G10Rik Noncoding-Transcript-Variant
Cpgi15500 within coordinates of
Rr606681 within coordinates of
Tssr40790 111 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs222676943
MGI SNP Detail
Alliance Variant		 Chr4:156194575 9430015G10Rik Intron
9430015G10Rik mRNA-UTR
9430015G10Rik Noncoding-Transcript-Variant
Cpgi15500 within coordinates of
Rr606681 within coordinates of
Tssr40790 114 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs244601872
MGI SNP Detail
Alliance Variant		 Chr4:156194601 9430015G10Rik Intron
9430015G10Rik mRNA-UTR
9430015G10Rik Noncoding-Transcript-Variant
Cpgi15500 within coordinates of
Rr606681 within coordinates of
Tssr40790 140 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs265592590
MGI SNP Detail
Alliance Variant		 Chr4:156194624 9430015G10Rik Intron
9430015G10Rik mRNA-UTR
9430015G10Rik Noncoding-Transcript-Variant
Cpgi15500 within coordinates of
Rr606681 within coordinates of
Tssr40790 163 bp downstream
 SNP G/T G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G T G G G G
rs227645311
MGI SNP Detail
Alliance Variant		 Chr4:156194648 9430015G10Rik Intron
9430015G10Rik Noncoding-Transcript-Variant
Cpgi15500 within coordinates of
Rr606681 within coordinates of
Tssr40790 187 bp downstream
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs246741717
MGI SNP Detail
Alliance Variant		 Chr4:156194659 9430015G10Rik Intron
9430015G10Rik Noncoding-Transcript-Variant
Cpgi15500 within coordinates of
Rr606681 within coordinates of
Tssr40790 198 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G A G G G G G A G A G G G G G G G G G G G G G G
rs260067900
MGI SNP Detail
Alliance Variant		 Chr4:156194660 9430015G10Rik Intron
9430015G10Rik Noncoding-Transcript-Variant
Cpgi15500 within coordinates of
Rr606681 within coordinates of
Tssr40790 199 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T C T T T T T C T C T T T T T T T T T T T T T T
rs581905999
MGI SNP Detail
Alliance Variant		 Chr4:156194672 9430015G10Rik Intron
9430015G10Rik Noncoding-Transcript-Variant
Cpgi15500 within coordinates of
Rr606681 within coordinates of
Tssr40790 211 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C A C C C C
rs51958598
MGI SNP Detail
Alliance Variant		 Chr4:156194704 9430015G10Rik Intron
9430015G10Rik Noncoding-Transcript-Variant
Cpgi15500 within coordinates of
Rr606681 within coordinates of
Tssr40790 243 bp downstream
 SNP A/T A T
rs252419300
MGI SNP Detail
Alliance Variant		 Chr4:156194708 9430015G10Rik Intron
9430015G10Rik Noncoding-Transcript-Variant
Cpgi15500 within coordinates of
Rr606681 within coordinates of
Tssr40790 247 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C C C C C C C C
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Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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03/25/2025
MGI 6.24 		The Jackson Laboratory