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Mouse SNP Summary
Symbol
Name
ID 		Tssr40896
transcription start site region 40896
MGI:5968663

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SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27690130
MGI SNP Detail		 Chr4:9285334 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1983 bp downstream
 SNP A/G G G G G G A G G G G G G A G
rs27690129
MGI SNP Detail		 Chr4:9285368 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1949 bp downstream
 SNP C/T C C C C C T C C C C C C T C
rs221946690
MGI SNP Detail		 Chr4:9285471 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1846 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G C G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G
rs27690128
MGI SNP Detail		 Chr4:9285476 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1841 bp downstream
 SNP C/T C C C C C T C C C C C T T C
rs257173065
MGI SNP Detail		 Chr4:9285507 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1810 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs27690127
MGI SNP Detail		 Chr4:9285537 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1780 bp downstream
 SNP A/G A A A A A G A A A A A A A
rs245805121
MGI SNP Detail		 Chr4:9285550 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1767 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27690126
MGI SNP Detail		 Chr4:9285553 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1764 bp downstream
 SNP A/T T T T T T T T T T T T A A T
rs27690125
MGI SNP Detail		 Chr4:9285562 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1755 bp downstream
 SNP C/T C C C C C T C C C C C C C C
rs27690124
MGI SNP Detail		 Chr4:9285598 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1719 bp downstream
 SNP C/T C C C C C C C C T C C C T T
rs27690123
MGI SNP Detail		 Chr4:9285610 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1707 bp downstream
 SNP A/T A A T A A A A A A A T T T
rs228917108
MGI SNP Detail		 Chr4:9285674 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1643 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A G A G A A A A A A A G A A A A
rs27690122
MGI SNP Detail		 Chr4:9285676 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1641 bp downstream
 SNP C/T C C C C T C C C C C T
rs215527389
MGI SNP Detail		 Chr4:9285689 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1628 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C T C C C C T C C C C C C C C C C T C T C C C C C C C C C C C C
rs238962886
MGI SNP Detail		 Chr4:9285690 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1627 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A G A A A A G A A A A A A A A A A G A G A A A A A A A A A A A A
rs27690121
MGI SNP Detail		 Chr4:9285736 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1581 bp downstream
 SNP G/T G G G G T G G T G G G T T
rs27690120
MGI SNP Detail		 Chr4:9285799 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1518 bp downstream
 SNP A/G G G A G G A G G A G G A A
rs214980413
MGI SNP Detail		 Chr4:9285818 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1499 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs236440200
MGI SNP Detail		 Chr4:9285849 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1468 bp downstream
 SNP C/G C C C C G C C C C G C C C C C C C C C C C C C C C C C C G C C C C C C C G G C C C G C C G C G C C C C G C
rs27690119
MGI SNP Detail		 Chr4:9285850 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1467 bp downstream
 SNP A/G G G G G G A G G G G G G
rs27690118
MGI SNP Detail		 Chr4:9285868 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1449 bp downstream
 SNP C/T C C C C C T C C C C C C C C
rs235265368
MGI SNP Detail		 Chr4:9285918 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1399 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G A G G A G G G G A G G G G G G G G G G A G A G G G G G G G A G G G G
rs251242333
MGI SNP Detail		 Chr4:9285920 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1397 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A T A A T A A A A T A A A A A A A A A A T A T A A A A A A A A A A A A
rs221387563
MGI SNP Detail		 Chr4:9285930 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1387 bp downstream
 SNP A/C C C C C C C C C C C C C C C C C C C C A C C A C C C C A C C C C C C C C C C A C A C C C C C C C A C C C C
rs243018010
MGI SNP Detail		 Chr4:9285947 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1370 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs27690117
MGI SNP Detail		 Chr4:9285957 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1360 bp downstream
 SNP A/G A A A A A G A A A A A A G A
rs27690116
MGI SNP Detail		 Chr4:9286018 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1299 bp downstream
 SNP A/G G G G G G G G G G G G G G A
rs27690115
MGI SNP Detail		 Chr4:9286055 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1262 bp downstream
 SNP A/T T T T T T A T T T T T A A T
rs260442996
MGI SNP Detail		 Chr4:9286120 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1197 bp downstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs228970754
MGI SNP Detail		 Chr4:9286141 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1176 bp downstream
 SNP A/G A A A A G A A A A G A A A A A A A A A G A A G A A A A G G G A A A A A A G G G A G G A A G A G A G A A G A
rs240155690
MGI SNP Detail		 Chr4:9286267 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1050 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T C T T T T C T T T T T T T T T C T C T T T T T T T C T T T T
rs259495064
MGI SNP Detail		 Chr4:9286278 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1039 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A G A G A A A A A A A A A A A A
rs233529749
MGI SNP Detail		 Chr4:9286284 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 1033 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A G A G A A A A A A A G A A A A
rs250998721
MGI SNP Detail		 Chr4:9286347 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 970 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27690114
MGI SNP Detail		 Chr4:9286374 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 943 bp downstream
 SNP A/C A A C A A C A A A A C C
rs227986461
MGI SNP Detail		 Chr4:9286410 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 907 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs243281458
MGI SNP Detail		 Chr4:9286420 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 897 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27690113
MGI SNP Detail		 Chr4:9286421 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 896 bp downstream
 SNP G/T T T T T T G T T T T T G G T
rs235276163
MGI SNP Detail		 Chr4:9286471 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 846 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C C C C T C C C C
rs27690112
MGI SNP Detail		 Chr4:9286472 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 845 bp downstream
 SNP A/G A A G A A A A A G A A G G G
rs216666656
MGI SNP Detail		 Chr4:9286480 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 837 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs238081609
MGI SNP Detail		 Chr4:9286522 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 795 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs257816740
MGI SNP Detail		 Chr4:9286539 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 778 bp downstream
 SNP G/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T G T T T T
rs220001474
MGI SNP Detail		 Chr4:9286552 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 765 bp downstream
 SNP A/T A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A T A A A A
rs242032686
MGI SNP Detail		 Chr4:9286556 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 761 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27690111
MGI SNP Detail		 Chr4:9286620 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 697 bp downstream
 SNP C/T C C C C C T C C C C C C C C
rs223217335
MGI SNP Detail		 Chr4:9286666 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 651 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T C T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs240221414
MGI SNP Detail		 Chr4:9286695 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 622 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs259559219
MGI SNP Detail		 Chr4:9286696 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 621 bp downstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A A A A A A A A A A A A A A A A A A A A A A A A A A A G A A A A
rs229427078
MGI SNP Detail		 Chr4:9286708 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 609 bp downstream
 SNP A/G G G G G A G G G G A G G G G G G G G G G G G G G G G G G A G G G G G G G A A G G G A G G A G A G G G G G G
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs246427572
MGI SNP Detail		 Chr4:9286710 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 607 bp downstream
 SNP A/T T T T T T T T T T T T T T T T T T T T A T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs262961146
MGI SNP Detail		 Chr4:9286763 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 554 bp downstream
 SNP C/G C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C G C C C C
rs27690110
MGI SNP Detail		 Chr4:9286786 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 531 bp downstream
 SNP C/T C C C C C T C C C C C C C C
rs243293845
MGI SNP Detail		 Chr4:9286787 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 530 bp downstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27690109
MGI SNP Detail		 Chr4:9286849 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 468 bp downstream
 SNP A/G G G G G G A G G G G G G G G
rs229356667
MGI SNP Detail		 Chr4:9286850 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 467 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs245411908
MGI SNP Detail		 Chr4:9286906 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 411 bp downstream
 SNP A/G G G G G A G G G G A G G G G G G G G G G G G G G G G G G A G G G G G G G A A G G G A G G A G A G G G G G G
rs217294477
MGI SNP Detail		 Chr4:9286931 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 386 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs236275099
MGI SNP Detail		 Chr4:9286960 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 357 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C T C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs262456859
MGI SNP Detail		 Chr4:9287029 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 288 bp downstream
 SNP A/G A A A A G A A A A G A A A A A A A A A G A A A A A A A A G A A A A A A G G A A A G A A G A G A G A A G A
rs211987263
MGI SNP Detail		 Chr4:9287035 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 282 bp downstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs230483948
MGI SNP Detail		 Chr4:9287061 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 256 bp downstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T C T T T T
rs27690108
MGI SNP Detail		 Chr4:9287083 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 234 bp downstream
 SNP A/T A A A A T A A T A A A T T
rs584216308
MGI SNP Detail		 Chr4:9287121 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 196 bp downstream
 SNP A/T A A A A T A A A A T A A A A A A A A T A A T A A A A T T A A A A A A A T T T A T A A T A T A T A A T A
rs33891546
MGI SNP Detail		 Chr4:9287179 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 138 bp downstream
 SNP A/C C A
rs582622606
MGI SNP Detail		 Chr4:9287222 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 95 bp downstream
 SNP A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A
rs586112646
MGI SNP Detail		 Chr4:9287231 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 86 bp downstream
 SNP C/G C C C C G C C C C G C C C C C C C C C C C C C C C C C G C C C C C C C G G C C C G C C G C G C G C C C
rs582448965
MGI SNP Detail		 Chr4:9287242 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 75 bp downstream
 SNP A/G G G G G A G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G A A G G G A G G A G A G G G G A G
rs27690107
MGI SNP Detail		 Chr4:9287276 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 41 bp downstream
 SNP C/T C C C C C C C C C C C C T C
rs240337488
MGI SNP Detail		 Chr4:9287313 Clvs1 within coordinates of
Gm11816 within coordinates of
Tssr40896 4 bp downstream
 SNP A/G G G G G A G G G G A G G G G G G G G G G G G G G G G G A G G G G G G G A A G G G A G G A G A G A G G A G
rs27690106
MGI SNP Detail		 Chr4:9287324 Clvs1 within coordinates of
Gm11816 within coordinates of
Rr588686 within coordinates of
Tssr40896 within coordinates of
 SNP A/G G G G G G A G G G G G A
rs221771937
MGI SNP Detail		 Chr4:9287329 Clvs1 within coordinates of
Gm11816 within coordinates of
Rr588686 within coordinates of
Tssr40896 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
rs243723911
MGI SNP Detail		 Chr4:9287340 Clvs1 within coordinates of
Gm11816 within coordinates of
Rr588686 within coordinates of
Tssr40896 within coordinates of
 SNP C/T C C C C T C C C C T C C C C C C C C C C C C C C C C C T C C C C C C C T T C C C T C C T C T C T C C T C
rs265393049
MGI SNP Detail		 Chr4:9287341 Clvs1 within coordinates of
Gm11816 within coordinates of
Rr588686 within coordinates of
Tssr40896 within coordinates of
 SNP A/G A A A A G A A A A G A A A A A A A A A A G A A A A G G A A A A A A A G G G A G G A A G A G A G A A G A
rs220851029
MGI SNP Detail		 Chr4:9287342 Clvs1 within coordinates of
Gm11816 within coordinates of
Rr588686 within coordinates of
Tssr40896 within coordinates of
 SNP A/C A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A C A A A A
SNP ID
(GRCm39)		 Map Position
(GRCm39)		 Gene & Category Variation
Type		 Allele
Summary
(all strains)
129P2/OlaHsd
129S1/SvImJ
129S5/SvEvBrd
129X1/SvJ
A/J
AKR/J
B10.RIII-H2<r> H2-T18<b>/(71NS)SnJ
BALB/cByJ
BALB/cJ
BTBR T<+> Itpr3<tf>/J
BUB/BnJ
C3H/HeH
C3H/HeJ
C57BL/10J
C57BL/10SnJ
C57BL/6J
C57BL/6NJ
C57BR/cdJ
C57L/J
C58/J
CAST/EiJ
CBA/J
CE/J
CZECHII/EiJ
DBA/1J
DBA/2J
FVB/NJ
I/LnJ
JF1/MsJ
KK/HlJ
LEWES/EiJ
LG/J
LP/J
MA/MyJ
MOLF/EiJ
NOD/ShiLtJ
NON/ShiLtJ
NZB/BlNJ
NZO/HlLtJ
NZW/LacJ
PL/J
PWD/PhJ
PWK/PhJ
QSi3/Ianm
QSi5/Ianm
RF/J
RIIIS/J
SEA/GnJ
SJL/J
SM/J
SPRET/EiJ
ST/bJ
SWR/J
WSB/EiJ
ZALENDE/EiJ
rs236989179
MGI SNP Detail		 Chr4:9287363 Clvs1 within coordinates of
Gm11816 within coordinates of
Rr588686 within coordinates of
Tssr40896 13 bp upstream
 SNP A/G A A A A A A A A A A A A A A A A A A A G A A G A A A A G A A A A A A A A A A G A G A A A A A A A G A A A A
rs259361584
MGI SNP Detail		 Chr4:9287438 Clvs1 within coordinates of
Rr588686 within coordinates of
Tssr40896 88 bp upstream
 SNP G/T T T T T G T T T T G T T T T T T T T T T T T G T T T T G G T T T T T T T G G G T G G T T G T G T T T T G T
rs229455171
MGI SNP Detail		 Chr4:9287443 Clvs1 within coordinates of
Rr588686 within coordinates of
Tssr40896 93 bp upstream
 SNP C/T T T T T C T T T T C T T T T T T T T T T T T C T T T T C C C T T T T T T C C C T C C T T C T C T C T T C T
rs245466197
MGI SNP Detail		 Chr4:9287496 Clvs1 within coordinates of
Rr588686 within coordinates of
Tssr40896 146 bp upstream
 SNP C/T C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C C T C C C C
rs27690105
MGI SNP Detail		 Chr4:9287502 Clvs1 within coordinates of
Rr588686 within coordinates of
Tssr40896 152 bp upstream
 SNP G/T T T T T G T T T T G G
rs27690104
MGI SNP Detail		 Chr4:9287512 Clvs1 within coordinates of
Rr588686 within coordinates of
Tssr40896 162 bp upstream
 SNP A/G G G G G G G G G G G G A A
rs27690103
MGI SNP Detail		 Chr4:9287653 Clvs1 within coordinates of
Tssr40896 303 bp upstream
 SNP G/T T T T T T G T T T T T G G
rs27690102
MGI SNP Detail		 Chr4:9287677 Clvs1 within coordinates of
Tssr40896 327 bp upstream
 SNP A/G A A A A A G A A A A A A A A
rs27690101
MGI SNP Detail		 Chr4:9287710 Clvs1 within coordinates of
Tssr40896 360 bp upstream
 SNP C/T C C C C C C C C C C T T C
rs27690100
MGI SNP Detail		 Chr4:9287717 Clvs1 within coordinates of
Tssr40896 367 bp upstream
 SNP C/T T T C T T T T T C T T T T C
rs230543228
MGI SNP Detail		 Chr4:9287752 Clvs1 within coordinates of
Tssr40896 402 bp upstream
 SNP C/T C C C C T C C C C T C C C C C C C C C C C C C C C C C C T T C C C C C C T T C C C T C C T C T C C C C C C
rs27690099
MGI SNP Detail		 Chr4:9287811 Clvs1 within coordinates of
Tssr40896 461 bp upstream
 SNP G/T T T T T G T T T T T T G G
rs27690098
MGI SNP Detail		 Chr4:9287837 Clvs1 within coordinates of
Tssr40896 487 bp upstream
 SNP A/G G G G G G A G G G G G G G G
rs233759946
MGI SNP Detail		 Chr4:9287929 Clvs1 within coordinates of
Tssr40896 579 bp upstream
 SNP C/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G C G G G G
rs585918283
MGI SNP Detail		 Chr4:9287933 Clvs1 within coordinates of
Tssr40896 583 bp upstream
 SNP C/T T T T T T T T T T T T T T T T T T T T T T T C T T T T C T T T T T T T T T T C T C T T T T T T T T T T T T
rs27690097
MGI SNP Detail		 Chr4:9287941 Clvs1 within coordinates of
Tssr40896 591 bp upstream
 SNP G/T G G G G G T G G G G G G G G
rs222304682
MGI SNP Detail		 Chr4:9287953 Clvs1 within coordinates of
Tssr40896 603 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C A C A C C C C C C C C C C C C
rs238700200
MGI SNP Detail		 Chr4:9287959 Clvs1 within coordinates of
Tssr40896 609 bp upstream
 SNP A/C C C C C C C C C C C C C C C C C C C C C C C A C C C C C C C C C C C C C C A C C C C C C C C C C C C C
rs27690096
MGI SNP Detail		 Chr4:9287993 Clvs1 within coordinates of
Tssr40896 643 bp upstream
 SNP A/G A A A A A A A A A A A A A G
rs218366036
MGI SNP Detail		 Chr4:9288078 Clvs1 within coordinates of
Tssr40896 728 bp upstream
 SNP A/G G G G G A G G G G A G G G G G G G G G G G G G G G G G G A A G G G G G G A A G G G A G G A G A G G G G G G
rs237104201
MGI SNP Detail		 Chr4:9288082 Clvs1 within coordinates of
Tssr40896 732 bp upstream
 SNP A/G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G G A G G G G
rs27690095
MGI SNP Detail		 Chr4:9288109 Clvs1 within coordinates of
Tssr40896 759 bp upstream
 SNP A/G A A A A A G A A A A A A G G
rs27690094
MGI SNP Detail		 Chr4:9288131 Clvs1 within coordinates of
Tssr40896 781 bp upstream
 SNP G/T T T T T T G T T T T T G G
rs239461686
MGI SNP Detail		 Chr4:9288167 Clvs1 within coordinates of
Tssr40896 817 bp upstream
 SNP A/T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T T A T T T T
rs27690093
MGI SNP Detail		 Chr4:9288200 Clvs1 within coordinates of
Tssr40896 850 bp upstream
 SNP A/G G G G G G G G G G G G G G A
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Showing SNP(s) 1 - 100 of 139
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory